RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 IRF7Q92985 503 aa19.43■□□□□ 0.7
CXCL12-204ENST00000395793 ZNF396Q96N95 335 aaPredicted RBP19.43■□□□□ 0.7
CXCL12-204ENST00000395793 MTMR12Q9C0I1 747 aa19.43■□□□□ 0.7
CXCL12-204ENST00000395793 GPR88Q9GZN0 384 aa19.43■□□□□ 0.7
CXCL12-204ENST00000395793 ATXN3LQ9H3M9 355 aa19.43■□□□□ 0.7
CXCL12-204ENST00000395793 TRPV5Q9NQA5 729 aa19.43■□□□□ 0.7
CXCL12-204ENST00000395793 ABI2Q9NYB9 513 aaPredicted RBP19.43■□□□□ 0.7
CXCL12-204ENST00000395793 NDRG2Q9UN36 371 aaKnown RBP19.43■□□□□ 0.7
CXCL12-204ENST00000395793 HCRTO43612 131 aa19.42■□□□□ 0.7
CXCL12-204ENST00000395793 CUTAO60888 179 aa19.42■□□□□ 0.7
CXCL12-204ENST00000395793 PRAMEF12O95522 483 aa19.42■□□□□ 0.7
CXCL12-204ENST00000395793 CASP1P29466 404 aa19.42■□□□□ 0.7
CXCL12-204ENST00000395793 RPS9P46781 194 aaKnown RBP19.42■□□□□ 0.7
CXCL12-204ENST00000395793 TUFMP49411 452 aaKnown RBP19.42■□□□□ 0.7
CXCL12-204ENST00000395793 GPR15P49685 360 aa19.42■□□□□ 0.7
CXCL12-204ENST00000395793 BFSP1Q12934 665 aa19.42■□□□□ 0.7
CXCL12-204ENST00000395793 PKP1Q13835 747 aa19.42■□□□□ 0.7
CXCL12-204ENST00000395793 GPR158Q5T848 1215 aa19.42■□□□□ 0.7
CXCL12-204ENST00000395793 EPM2AIP1Q7L775 607 aaPredicted RBP19.42■□□□□ 0.7
CXCL12-204ENST00000395793 ITIH5Q86UX2 942 aa19.42■□□□□ 0.7
CXCL12-204ENST00000395793 OR5B17Q8NGF7 314 aa19.42■□□□□ 0.7
CXCL12-204ENST00000395793 SPPL2BQ8TCT7 592 aa19.42■□□□□ 0.7
CXCL12-204ENST00000395793 NELL2Q99435 816 aa19.42■□□□□ 0.7
CXCL12-204ENST00000395793 TMEM206Q9H813 350 aa19.42■□□□□ 0.7
CXCL12-204ENST00000395793 PIAS3Q9Y6X2 628 aa19.42■□□□□ 0.7
CXCL12-204ENST00000395793 ZNF638Q14966 1978 aaKnown RBP19.42■□□□□ 0.7
CXCL12-204ENST00000395793 GPR179Q6PRD1 2367 aa19.42■□□□□ 0.7
CXCL12-204ENST00000395793 ZNF292O60281 2723 aa19.42■□□□□ 0.7
CXCL12-204ENST00000395793 ZNF263O14978 683 aa19.41■□□□□ 0.7
CXCL12-204ENST00000395793 LAMTOR5O43504 91 aa19.41■□□□□ 0.7
CXCL12-204ENST00000395793 F13A1P00488 732 aa19.41■□□□□ 0.7
CXCL12-204ENST00000395793 LMNAP02545 664 aaKnown RBP19.41■□□□□ 0.7
CXCL12-204ENST00000395793 ZSCAN22P10073 491 aaPredicted RBP19.41■□□□□ 0.7
CXCL12-204ENST00000395793 PNPLA4P41247 253 aa19.41■□□□□ 0.7
CXCL12-204ENST00000395793 MAGEA9P43362 315 aa19.41■□□□□ 0.7
CXCL12-204ENST00000395793 ASIC1P78348 528 aa19.41■□□□□ 0.7
CXCL12-204ENST00000395793 FCHO2Q0JRZ9 810 aa19.41■□□□□ 0.7
CXCL12-204ENST00000395793 TMEM150AQ86TG1 271 aa19.41■□□□□ 0.7
CXCL12-204ENST00000395793 CBWD2Q8IUF1 395 aa19.41■□□□□ 0.7
CXCL12-204ENST00000395793 CSGALNACT2Q8N6G5 542 aa19.41■□□□□ 0.7
CXCL12-204ENST00000395793 LRRC52Q8N7C0 313 aa19.41■□□□□ 0.7
CXCL12-204ENST00000395793 FAM200AQ8TCP9 573 aa19.41■□□□□ 0.7
CXCL12-204ENST00000395793 C2orf15Q8WU43 125 aaKnown RBP19.41■□□□□ 0.7
CXCL12-204ENST00000395793 PKMYT1Q99640 499 aa19.41■□□□□ 0.7
CXCL12-204ENST00000395793 CUEDC2Q9H467 287 aa19.41■□□□□ 0.7
CXCL12-204ENST00000395793 FBXO4Q9UKT5 387 aa19.41■□□□□ 0.7
CXCL12-204ENST00000395793 ITGA11Q9UKX5 1188 aa19.41■□□□□ 0.7
CXCL12-204ENST00000395793 HMGA1P17096 107 aaKnown RBP19.4■□□□□ 0.7
CXCL12-204ENST00000395793 ACAT1P24752 427 aaKnown RBP19.4■□□□□ 0.7
CXCL12-204ENST00000395793 SOX9P48436 509 aa19.4■□□□□ 0.7
CXCL12-204ENST00000395793 CSTF1Q05048 431 aaKnown RBP19.4■□□□□ 0.7
CXCL12-204ENST00000395793 EHHADHQ08426 723 aa19.4■□□□□ 0.7
CXCL12-204ENST00000395793 MTAPQ13126 283 aa19.4■□□□□ 0.7
CXCL12-204ENST00000395793 WDR44Q5JSH3 913 aa19.4■□□□□ 0.7
CXCL12-204ENST00000395793 CNNM4Q6P4Q7 775 aa19.4■□□□□ 0.7
CXCL12-204ENST00000395793 TSSK4Q6SA08 328 aa19.4■□□□□ 0.7
CXCL12-204ENST00000395793 CACTINQ8WUQ7 758 aaKnown RBP19.4■□□□□ 0.7
CXCL12-204ENST00000395793 E2F7Q96AV8 911 aa19.4■□□□□ 0.7
CXCL12-204ENST00000395793 ZFYVE19Q96K21 471 aa19.4■□□□□ 0.7
CXCL12-204ENST00000395793 PI4K2AQ9BTU6 479 aa19.4■□□□□ 0.7
CXCL12-204ENST00000395793 SMG9Q9H0W8 520 aaKnown RBP19.4■□□□□ 0.7
CXCL12-204ENST00000395793 SEMA4AQ9H3S1 761 aa19.4■□□□□ 0.7
CXCL12-204ENST00000395793 INTS13Q9NVM9 706 aa19.4■□□□□ 0.7
CXCL12-204ENST00000395793 GDAP2Q9NXN4 497 aa19.4■□□□□ 0.7
CXCL12-204ENST00000395793 DDX43Q9NXZ2 648 aaKnown RBP19.4■□□□□ 0.7
CXCL12-204ENST00000395793 MRPS17Q9Y2R5 130 aaKnown RBP19.4■□□□□ 0.7
CXCL12-204ENST00000395793 PTPRDP23468 1912 aa19.4■□□□□ 0.7
CXCL12-204ENST00000395793 GREB1Q4ZG55 1949 aa19.4■□□□□ 0.7
CXCL12-204ENST00000395793 ANAPC1Q9H1A4 1944 aa19.39■□□□□ 0.7
CXCL12-204ENST00000395793 MAN2B1O00754 1011 aa19.39■□□□□ 0.69
CXCL12-204ENST00000395793 CHADO15335 359 aa19.39■□□□□ 0.69
CXCL12-204ENST00000395793 EIF3DO15371 548 aaKnown RBP eCLIP19.39■□□□□ 0.69
CXCL12-204ENST00000395793 TGFB1I1O43294 461 aa19.39■□□□□ 0.69
CXCL12-204ENST00000395793 KRT19P08727 400 aa19.39■□□□□ 0.69
CXCL12-204ENST00000395793 TMEM191BP0C7N4 346 aa19.39■□□□□ 0.69
CXCL12-204ENST00000395793 SMARCB1Q12824 385 aa19.39■□□□□ 0.69
CXCL12-204ENST00000395793 VEPH1Q14D04 833 aa19.39■□□□□ 0.69
CXCL12-204ENST00000395793 ZNF528Q3MIS6 628 aa19.39■□□□□ 0.69
CXCL12-204ENST00000395793 INTS6LQ5JSJ4 861 aaKnown RBP19.39■□□□□ 0.69
CXCL12-204ENST00000395793 FAM26FQ5R3K3 315 aa19.39■□□□□ 0.69
CXCL12-204ENST00000395793 SDHAF4Q5VUM1 108 aa19.39■□□□□ 0.69
CXCL12-204ENST00000395793 HSCBQ8IWL3 235 aa19.39■□□□□ 0.69
CXCL12-204ENST00000395793 DCP1BQ8IZD4 617 aaKnown RBP19.39■□□□□ 0.69
CXCL12-204ENST00000395793 SUMF1Q8NBK3 374 aa19.39■□□□□ 0.69
CXCL12-204ENST00000395793 ZNF507Q8TCN5 953 aa19.39■□□□□ 0.69
CXCL12-204ENST00000395793 KCNG4Q8TDN1 519 aa19.39■□□□□ 0.69
CXCL12-204ENST00000395793 FAM3CQ92520 227 aa19.39■□□□□ 0.69
CXCL12-204ENST00000395793 C7orf25Q9BPX7 421 aa19.39■□□□□ 0.69
CXCL12-204ENST00000395793 BLZF1Q9H2G9 400 aa19.39■□□□□ 0.69
CXCL12-204ENST00000395793 CHRDQ9H2X0 955 aa19.39■□□□□ 0.69
CXCL12-204ENST00000395793 TASP1Q9H6P5 420 aa19.39■□□□□ 0.69
CXCL12-204ENST00000395793 PRMT8Q9NR22 394 aaPredicted RBP19.39■□□□□ 0.69
CXCL12-204ENST00000395793 HSPBP1Q9NZL4 362 aa19.39■□□□□ 0.69
CXCL12-204ENST00000395793 PCDHA7Q9UN72 937 aa19.39■□□□□ 0.69
CXCL12-204ENST00000395793 PCDHB5Q9Y5E4 795 aa19.39■□□□□ 0.69
CXCL12-204ENST00000395793 SNX9Q9Y5X1 595 aa19.39■□□□□ 0.69
CXCL12-204ENST00000395793 SLC38A8A6NNN8 435 aa19.38■□□□□ 0.69
CXCL12-204ENST00000395793 NCAM2O15394 837 aa19.38■□□□□ 0.69
CXCL12-204ENST00000395793 POLR2DO15514 142 aaKnown RBP19.38■□□□□ 0.69
CXCL12-204ENST00000395793 HUS1O60921 280 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms