RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 TWNKQ96RR1 684 aa14.77□□□□□ -0.05
SNCA-204ENST00000394989 MTRF1LQ9UGC7 380 aaKnown RBP14.77□□□□□ -0.05
SNCA-204ENST00000394989 IVNS1ABPQ9Y6Y0 642 aa14.77□□□□□ -0.05
SNCA-204ENST00000394989 PI4K2BG5E9Z4 385 aa14.77□□□□□ -0.05
SNCA-204ENST00000394989 RIPK2O43353 540 aa14.77□□□□□ -0.05
SNCA-204ENST00000394989 KIAA0754O94854 1291 aa14.77□□□□□ -0.05
SNCA-204ENST00000394989 ITGB3P05106 788 aa14.77□□□□□ -0.05
SNCA-204ENST00000394989 SSR1P43307 286 aaKnown RBP14.77□□□□□ -0.05
SNCA-204ENST00000394989 RAD23BP54727 409 aa14.77□□□□□ -0.05
SNCA-204ENST00000394989 MAGOHP61326 146 aaKnown RBP14.77□□□□□ -0.05
SNCA-204ENST00000394989 IFFO1Q0D2I5 559 aa14.77□□□□□ -0.05
SNCA-204ENST00000394989 PTK6Q13882 451 aa14.77□□□□□ -0.05
SNCA-204ENST00000394989 SLC10A6Q3KNW5 377 aa14.77□□□□□ -0.05
SNCA-204ENST00000394989 PTPN20Q4JDL3 420 aa14.77□□□□□ -0.05
SNCA-204ENST00000394989 MAP1SQ66K74 1059 aaPredicted RBP14.77□□□□□ -0.05
SNCA-204ENST00000394989 MTHFD1LQ6UB35 978 aa14.77□□□□□ -0.05
SNCA-204ENST00000394989 GTF3C2Q8WUA4 911 aaPredicted RBP14.77□□□□□ -0.05
SNCA-204ENST00000394989 TLCD1Q96CP7 247 aa14.77□□□□□ -0.05
SNCA-204ENST00000394989 SMYD3Q9H7B4 428 aa14.77□□□□□ -0.05
SNCA-204ENST00000394989 WHRNQ9P202 907 aa14.77□□□□□ -0.05
SNCA-204ENST00000394989 A6NNZ2 444 aa14.76□□□□□ -0.05
SNCA-204ENST00000394989 ADCY6O43306 1168 aa14.76□□□□□ -0.05
SNCA-204ENST00000394989 MCF2P10911 925 aa14.76□□□□□ -0.05
SNCA-204ENST00000394989 RARGP13631 454 aa14.76□□□□□ -0.05
SNCA-204ENST00000394989 PSEN1P49768 467 aa14.76□□□□□ -0.05
SNCA-204ENST00000394989 TUBB8Q3ZCM7 444 aa14.76□□□□□ -0.05
SNCA-204ENST00000394989 DENND2CQ68D51 928 aa14.76□□□□□ -0.05
SNCA-204ENST00000394989 DNAJC24Q6P3W2 148 aa14.76□□□□□ -0.05
SNCA-204ENST00000394989 MAIP1Q8WWC4 291 aa14.76□□□□□ -0.05
SNCA-204ENST00000394989 CCL15-CCL14A0A0B4J2E2 113 aa14.76□□□□□ -0.05
SNCA-204ENST00000394989 H3BRB1 525 aa14.76□□□□□ -0.05
SNCA-204ENST00000394989 KRT10P13645 584 aa14.76□□□□□ -0.05
SNCA-204ENST00000394989 CHKAP35790 457 aa14.76□□□□□ -0.05
SNCA-204ENST00000394989 NFX1Q12986 1120 aaKnown RBP14.76□□□□□ -0.05
SNCA-204ENST00000394989 CCL15Q16663 113 aa14.76□□□□□ -0.05
SNCA-204ENST00000394989 C3orf20Q8ND61 904 aa14.76□□□□□ -0.05
SNCA-204ENST00000394989 TUT1Q9H6E5 874 aaKnown RBP14.76□□□□□ -0.05
SNCA-204ENST00000394989 ASIC3Q9UHC3 531 aa14.76□□□□□ -0.05
SNCA-204ENST00000394989 MAGEB2O15479 319 aa14.75□□□□□ -0.05
SNCA-204ENST00000394989 CETPP11597 493 aa14.75□□□□□ -0.05
SNCA-204ENST00000394989 SMPD1P17405 629 aa14.75□□□□□ -0.05
SNCA-204ENST00000394989 SEC24CP53992 1094 aa14.75□□□□□ -0.05
SNCA-204ENST00000394989 LACTBP83111 547 aaPredicted RBP14.75□□□□□ -0.05
SNCA-204ENST00000394989 CCNG2Q16589 344 aa14.75□□□□□ -0.05
SNCA-204ENST00000394989 ZNF667Q5HYK9 610 aa14.75□□□□□ -0.05
SNCA-204ENST00000394989 ILDR2Q71H61 639 aa14.75□□□□□ -0.05
SNCA-204ENST00000394989 ERICH1Q86X53 443 aa14.75□□□□□ -0.05
SNCA-204ENST00000394989 SLC4A11Q8NBS3 891 aa14.75□□□□□ -0.05
SNCA-204ENST00000394989 ATL2Q8NHH9 583 aa14.75□□□□□ -0.05
SNCA-204ENST00000394989 UHMK1Q8TAS1 419 aaKnown RBP14.75□□□□□ -0.05
SNCA-204ENST00000394989 ACSF2Q96CM8 615 aaPredicted RBP14.75□□□□□ -0.05
SNCA-204ENST00000394989 SLITRK1Q96PX8 696 aa14.75□□□□□ -0.05
SNCA-204ENST00000394989 MORF4L1Q9UBU8 362 aa14.75□□□□□ -0.05
SNCA-204ENST00000394989 SLC45A1Q9Y2W3 748 aa14.75□□□□□ -0.05
SNCA-204ENST00000394989 CALCOCO2Q13137 446 aa14.75□□□□□ -0.05
SNCA-204ENST00000394989 PTGISQ16647 500 aa14.75□□□□□ -0.05
SNCA-204ENST00000394989 MFSD7Q6UXD7 560 aa14.75□□□□□ -0.05
SNCA-204ENST00000394989 GPR142Q7Z601 462 aa14.75□□□□□ -0.05
SNCA-204ENST00000394989 ZNF467Q7Z7K2 595 aaPredicted RBP14.75□□□□□ -0.05
SNCA-204ENST00000394989 PRUNE1Q86TP1 453 aa14.75□□□□□ -0.05
SNCA-204ENST00000394989 SUGP1Q8IWZ8 645 aaKnown RBP14.75□□□□□ -0.05
SNCA-204ENST00000394989 GIMAP7Q8NHV1 300 aa14.75□□□□□ -0.05
SNCA-204ENST00000394989 CCDC114Q96M63 670 aa14.75□□□□□ -0.05
SNCA-204ENST00000394989 STRNO43815 780 aa14.75□□□□□ -0.05
SNCA-204ENST00000394989 TSPAN1O60635 241 aa14.75□□□□□ -0.05
SNCA-204ENST00000394989 CD19P15391 556 aa14.75□□□□□ -0.05
SNCA-204ENST00000394989 RFC1P35251 1148 aaPredicted RBP14.75□□□□□ -0.05
SNCA-204ENST00000394989 PPP2R2AP63151 447 aa14.75□□□□□ -0.05
SNCA-204ENST00000394989 SLMAPQ14BN4 828 aa14.75□□□□□ -0.05
SNCA-204ENST00000394989 DCUN1D2Q6PH85 259 aa14.75□□□□□ -0.05
SNCA-204ENST00000394989 CCDC25Q86WR0 208 aa14.75□□□□□ -0.05
SNCA-204ENST00000394989 SNF8Q96H20 258 aa14.75□□□□□ -0.05
SNCA-204ENST00000394989 FAM129AQ9BZQ8 928 aa14.75□□□□□ -0.05
SNCA-204ENST00000394989 ELOVL4Q9GZR5 314 aa14.75□□□□□ -0.05
SNCA-204ENST00000394989 EPN3Q9H201 632 aa14.75□□□□□ -0.05
SNCA-204ENST00000394989 LHX5Q9H2C1 402 aa14.75□□□□□ -0.05
SNCA-204ENST00000394989 CEP83Q9Y592 693 aa14.75□□□□□ -0.05
SNCA-204ENST00000394989 COL1A2P08123 1366 aa14.74□□□□□ -0.05
SNCA-204ENST00000394989 ITIH2P19823 946 aa14.74□□□□□ -0.05
SNCA-204ENST00000394989 ITGA8P53708 1063 aa14.74□□□□□ -0.05
SNCA-204ENST00000394989 SYDE1Q6ZW31 735 aaPredicted RBP14.74□□□□□ -0.05
SNCA-204ENST00000394989 ARFGAP1Q8N6T3 406 aa14.74□□□□□ -0.05
SNCA-204ENST00000394989 NIPA2Q8N8Q9 360 aa14.74□□□□□ -0.05
SNCA-204ENST00000394989 MAML3Q96JK9 1138 aa14.74□□□□□ -0.05
SNCA-204ENST00000394989 CPXM1Q96SM3 734 aa14.74□□□□□ -0.05
SNCA-204ENST00000394989 DDX23Q9BUQ8 820 aaKnown RBP14.74□□□□□ -0.05
SNCA-204ENST00000394989 CXCL16Q9H2A7 254 aa14.74□□□□□ -0.05
SNCA-204ENST00000394989 CILPO75339 1184 aa14.74□□□□□ -0.05
SNCA-204ENST00000394989 GTF2A2P52657 109 aa14.74□□□□□ -0.05
SNCA-204ENST00000394989 GRB14Q14449 540 aa14.74□□□□□ -0.05
SNCA-204ENST00000394989 KAZNQ674X7 775 aa14.74□□□□□ -0.05
SNCA-204ENST00000394989 KIAA0319LQ8IZA0 1049 aa14.74□□□□□ -0.05
SNCA-204ENST00000394989 JOSD2Q8TAC2 188 aa14.74□□□□□ -0.05
SNCA-204ENST00000394989 EPS8L3Q8TE67 593 aaKnown RBP14.74□□□□□ -0.05
SNCA-204ENST00000394989 GRK7Q8WTQ7 553 aa14.74□□□□□ -0.05
SNCA-204ENST00000394989 NLRP7Q8WX94 980 aa14.74□□□□□ -0.05
SNCA-204ENST00000394989 RAPGEF5Q92565 580 aa14.74□□□□□ -0.05
SNCA-204ENST00000394989 PWWP2AQ96N64 755 aa14.74□□□□□ -0.05
SNCA-204ENST00000394989 CDC42EP4Q9H3Q1 356 aaKnown RBP14.74□□□□□ -0.05
SNCA-204ENST00000394989 ASB7Q9H672 318 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms