RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 ENTPD5O75356 428 aa16.96■□□□□ 0.31
PCDH1-203ENST00000394536 SPOCD1Q6ZMY3 1216 aa16.96■□□□□ 0.31
PCDH1-203ENST00000394536 TTC13Q8NBP0 860 aa16.96■□□□□ 0.31
PCDH1-203ENST00000394536 ATP2A3Q93084 1043 aa16.96■□□□□ 0.31
PCDH1-203ENST00000394536 FAM149B1Q96BN6 582 aa16.96■□□□□ 0.31
PCDH1-203ENST00000394536 NAF1Q96HR8 494 aaKnown RBP16.96■□□□□ 0.31
PCDH1-203ENST00000394536 GPR88Q9GZN0 384 aa16.96■□□□□ 0.31
PCDH1-203ENST00000394536 RANBP17Q9H2T7 1088 aaKnown RBP16.96■□□□□ 0.31
PCDH1-203ENST00000394536 MGRN1O60291 552 aa16.95■□□□□ 0.3
PCDH1-203ENST00000394536 NCF2P19878 526 aaPredicted RBP16.95■□□□□ 0.3
PCDH1-203ENST00000394536 MYL6P60660 151 aa16.95■□□□□ 0.3
PCDH1-203ENST00000394536 GCNT1Q02742 428 aa16.95■□□□□ 0.3
PCDH1-203ENST00000394536 STXBP2Q15833 593 aa16.95■□□□□ 0.3
PCDH1-203ENST00000394536 ANO5Q75V66 913 aa16.95■□□□□ 0.3
PCDH1-203ENST00000394536 PCGF5Q86SE9 256 aa16.95■□□□□ 0.3
PCDH1-203ENST00000394536 ZNF677Q86XU0 584 aa16.95■□□□□ 0.3
PCDH1-203ENST00000394536 NUDCD3Q8IVD9 361 aa16.95■□□□□ 0.3
PCDH1-203ENST00000394536 TCP10LQ8TDR4 215 aa16.95■□□□□ 0.3
PCDH1-203ENST00000394536 PAFAH2Q99487 392 aa16.95■□□□□ 0.3
PCDH1-203ENST00000394536 CYP4F11Q9HBI6 524 aa16.95■□□□□ 0.3
PCDH1-203ENST00000394536 FZD1Q9UP38 647 aa16.95■□□□□ 0.3
PCDH1-203ENST00000394536 SRCAPQ6ZRS2 3230 aa16.95■□□□□ 0.3
PCDH1-203ENST00000394536 E2F8A0AVK6 867 aa16.95■□□□□ 0.3
PCDH1-203ENST00000394536 MAP3K7O43318 606 aa16.95■□□□□ 0.3
PCDH1-203ENST00000394536 ADSSP30520 456 aa16.95■□□□□ 0.3
PCDH1-203ENST00000394536 RGS7P49802 495 aa16.95■□□□□ 0.3
PCDH1-203ENST00000394536 MAMLD1Q13495 774 aa16.95■□□□□ 0.3
PCDH1-203ENST00000394536 NAIF1Q69YI7 327 aaPredicted RBP16.95■□□□□ 0.3
PCDH1-203ENST00000394536 NME8Q8N427 588 aa16.95■□□□□ 0.3
PCDH1-203ENST00000394536 CCNYQ8ND76 341 aa16.95■□□□□ 0.3
PCDH1-203ENST00000394536 TTC16Q8NEE8 873 aa16.95■□□□□ 0.3
PCDH1-203ENST00000394536 DNAJC9Q8WXX5 260 aa16.95■□□□□ 0.3
PCDH1-203ENST00000394536 SHCBP1LQ9BZQ2 653 aa16.95■□□□□ 0.3
PCDH1-203ENST00000394536 AS3MTQ9HBK9 375 aa16.95■□□□□ 0.3
PCDH1-203ENST00000394536 BATF3Q9NR55 127 aa16.95■□□□□ 0.3
PCDH1-203ENST00000394536 DONSONQ9NYP3 566 aa16.95■□□□□ 0.3
PCDH1-203ENST00000394536 MYH14Q7Z406 1995 aaKnown RBP16.95■□□□□ 0.3
PCDH1-203ENST00000394536 B2RBV5 119 aa16.95■□□□□ 0.3
PCDH1-203ENST00000394536 DNALI1O14645 258 aaPredicted RBP16.95■□□□□ 0.3
PCDH1-203ENST00000394536 ALDH18A1P54886 795 aaKnown RBP16.95■□□□□ 0.3
PCDH1-203ENST00000394536 TFDP3Q5H9I0 405 aa16.95■□□□□ 0.3
PCDH1-203ENST00000394536 ECHDC2Q86YB7 292 aa16.95■□□□□ 0.3
PCDH1-203ENST00000394536 TSNARE1Q96NA8 513 aa16.95■□□□□ 0.3
PCDH1-203ENST00000394536 ACAP3Q96P50 834 aa16.95■□□□□ 0.3
PCDH1-203ENST00000394536 DLGAP2Q9P1A6 1054 aa16.95■□□□□ 0.3
PCDH1-203ENST00000394536 KCNN4O15554 427 aa16.94■□□□□ 0.3
PCDH1-203ENST00000394536 CSDE1O75534 798 aaKnown RBP16.94■□□□□ 0.3
PCDH1-203ENST00000394536 RCN1Q15293 331 aa16.94■□□□□ 0.3
PCDH1-203ENST00000394536 CIAPIN1Q6FI81 312 aa16.94■□□□□ 0.3
PCDH1-203ENST00000394536 VSTM1Q6UX27 236 aa16.94■□□□□ 0.3
PCDH1-203ENST00000394536 BSNDQ8WZ55 320 aa16.94■□□□□ 0.3
PCDH1-203ENST00000394536 MIS12Q9H081 205 aa16.94■□□□□ 0.3
PCDH1-203ENST00000394536 ARMCX1Q9P291 453 aa16.94■□□□□ 0.3
PCDH1-203ENST00000394536 MED7O43513 233 aa16.94■□□□□ 0.3
PCDH1-203ENST00000394536 CCDC22O60826 627 aa16.94■□□□□ 0.3
PCDH1-203ENST00000394536 UNC5CO95185 931 aa16.94■□□□□ 0.3
PCDH1-203ENST00000394536 TAC1P20366 129 aa16.94■□□□□ 0.3
PCDH1-203ENST00000394536 BCAR1P56945 870 aa16.94■□□□□ 0.3
PCDH1-203ENST00000394536 SNRPFP62306 86 aaKnown RBP16.94■□□□□ 0.3
PCDH1-203ENST00000394536 MRPS9P82933 396 aaKnown RBP16.94■□□□□ 0.3
PCDH1-203ENST00000394536 C1orf146Q5VVC0 180 aa16.94■□□□□ 0.3
PCDH1-203ENST00000394536 SESTD1Q86VW0 696 aa16.94■□□□□ 0.3
PCDH1-203ENST00000394536 ARID3BQ8IVW6 561 aaPredicted RBP16.94■□□□□ 0.3
PCDH1-203ENST00000394536 UBA3Q8TBC4 463 aa16.94■□□□□ 0.3
PCDH1-203ENST00000394536 APOL6Q9BWW8 343 aa16.94■□□□□ 0.3
PCDH1-203ENST00000394536 RPF1Q9H9Y2 349 aaKnown RBP16.94■□□□□ 0.3
PCDH1-203ENST00000394536 H3BRJ5 948 aa16.94■□□□□ 0.3
PCDH1-203ENST00000394536 ROR1Q01973 937 aa16.94■□□□□ 0.3
PCDH1-203ENST00000394536 PIGHQ14442 188 aaPredicted RBP16.94■□□□□ 0.3
PCDH1-203ENST00000394536 TMEM154Q6P9G4 183 aa16.94■□□□□ 0.3
PCDH1-203ENST00000394536 LRRC6Q86X45 466 aa16.94■□□□□ 0.3
PCDH1-203ENST00000394536 CRLF3Q8IUI8 442 aa16.94■□□□□ 0.3
PCDH1-203ENST00000394536 AGR3Q8TD06 166 aa16.94■□□□□ 0.3
PCDH1-203ENST00000394536 PPP4R1Q8TF05 950 aa16.94■□□□□ 0.3
PCDH1-203ENST00000394536 ZNF75CPQ92670 426 aaPredicted RBP16.94■□□□□ 0.3
PCDH1-203ENST00000394536 PXMP2Q9NR77 195 aa16.94■□□□□ 0.3
PCDH1-203ENST00000394536 DDX56Q9NY93 547 aaKnown RBP16.94■□□□□ 0.3
PCDH1-203ENST00000394536 HESX1Q9UBX0 185 aa16.94■□□□□ 0.3
PCDH1-203ENST00000394536 ADAMTSL3P82987 1691 aa16.94■□□□□ 0.3
PCDH1-203ENST00000394536 ZWINTO95229 277 aa16.93■□□□□ 0.3
PCDH1-203ENST00000394536 CCNE2O96020 404 aa16.93■□□□□ 0.3
PCDH1-203ENST00000394536 GARTP22102 1010 aa16.93■□□□□ 0.3
PCDH1-203ENST00000394536 DSG3P32926 999 aa16.93■□□□□ 0.3
PCDH1-203ENST00000394536 NOVP48745 357 aa16.93■□□□□ 0.3
PCDH1-203ENST00000394536 FAM160B1Q5W0V3 765 aa16.93■□□□□ 0.3
PCDH1-203ENST00000394536 DCAF15Q66K64 600 aa16.93■□□□□ 0.3
PCDH1-203ENST00000394536 MFSD5Q6N075 450 aa16.93■□□□□ 0.3
PCDH1-203ENST00000394536 RIBC1Q8N443 379 aaPredicted RBP16.93■□□□□ 0.3
PCDH1-203ENST00000394536 THTPAQ9BU02 230 aa16.93■□□□□ 0.3
PCDH1-203ENST00000394536 TBC1D10AQ9BXI6 508 aa16.93■□□□□ 0.3
PCDH1-203ENST00000394536 MAPTP10636 758 aaKnown RBP16.93■□□□□ 0.3
PCDH1-203ENST00000394536 ZNF200P98182 395 aaPredicted RBP16.93■□□□□ 0.3
PCDH1-203ENST00000394536 MPP2Q14168 576 aa16.93■□□□□ 0.3
PCDH1-203ENST00000394536 EMC10Q5UCC4 262 aa16.93■□□□□ 0.3
PCDH1-203ENST00000394536 OR5B17Q8NGF7 314 aa16.93■□□□□ 0.3
PCDH1-203ENST00000394536 CISHQ9NSE2 258 aa16.93■□□□□ 0.3
PCDH1-203ENST00000394536 STRIP2Q9ULQ0 834 aa16.93■□□□□ 0.3
PCDH1-203ENST00000394536 A6NJR5 290 aa16.93■□□□□ 0.3
PCDH1-203ENST00000394536 TRIM49D1C9J1S8 452 aa16.93■□□□□ 0.3
PCDH1-203ENST00000394536 CFHP08603 1231 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms