RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 CAPN12Q6ZSI9 719 aa20.67■□□□□ 0.9
RCCD1-201ENST00000394258 ZBTB8OSQ8IWT0 167 aa20.67■□□□□ 0.9
RCCD1-201ENST00000394258 FBXO16Q8IX29 292 aaPredicted RBP20.67■□□□□ 0.9
RCCD1-201ENST00000394258 SLITRK1Q96PX8 696 aa20.67■□□□□ 0.9
RCCD1-201ENST00000394258 KDM4CQ9H3R0 1056 aa20.67■□□□□ 0.9
RCCD1-201ENST00000394258 HOMER3Q9NSC5 361 aa20.67■□□□□ 0.9
RCCD1-201ENST00000394258 SAE1Q9UBE0 346 aaPredicted RBP20.67■□□□□ 0.9
RCCD1-201ENST00000394258 LRRD1A4D1F6 860 aa20.67■□□□□ 0.9
RCCD1-201ENST00000394258 ZBTB42B2RXF5 422 aa20.67■□□□□ 0.9
RCCD1-201ENST00000394258 CDH8P55286 799 aa20.67■□□□□ 0.9
RCCD1-201ENST00000394258 SGSM1Q2NKQ1 1148 aa20.67■□□□□ 0.9
RCCD1-201ENST00000394258 EEF1DP3Q658K8 133 aa20.67■□□□□ 0.9
RCCD1-201ENST00000394258 CYB5D1Q6P9G0 228 aa20.67■□□□□ 0.9
RCCD1-201ENST00000394258 ERICH1Q86X53 443 aa20.67■□□□□ 0.9
RCCD1-201ENST00000394258 UBR7Q8N806 425 aa20.67■□□□□ 0.9
RCCD1-201ENST00000394258 TMEM35BQ8NCS4 154 aa20.67■□□□□ 0.9
RCCD1-201ENST00000394258 SERPINB12Q96P63 405 aa20.67■□□□□ 0.9
RCCD1-201ENST00000394258 GPR20Q99678 358 aa20.67■□□□□ 0.9
RCCD1-201ENST00000394258 TXNRD2Q9NNW7 524 aa20.67■□□□□ 0.9
RCCD1-201ENST00000394258 DDNO94850 711 aaPredicted RBP20.66■□□□□ 0.9
RCCD1-201ENST00000394258 ELF1P32519 619 aa20.66■□□□□ 0.9
RCCD1-201ENST00000394258 CLCN3P51790 818 aa20.66■□□□□ 0.9
RCCD1-201ENST00000394258 SMTNL2Q2TAL5 461 aa20.66■□□□□ 0.9
RCCD1-201ENST00000394258 ANKS4BQ8N8V4 417 aa20.66■□□□□ 0.9
RCCD1-201ENST00000394258 RBM15Q96T37 977 aaKnown RBP eCLIP20.66■□□□□ 0.97e-9■■■■□ 24.7
RCCD1-201ENST00000394258 CCDC134Q9H6E4 229 aa20.66■□□□□ 0.9
RCCD1-201ENST00000394258 C10orf88Q9H8K7 445 aa20.66■□□□□ 0.9
RCCD1-201ENST00000394258 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.66■□□□□ 0.9
RCCD1-201ENST00000394258 CPSF3Q9UKF6 684 aaKnown RBP20.66■□□□□ 0.9
RCCD1-201ENST00000394258 CETN2P41208 172 aa20.66■□□□□ 0.9
RCCD1-201ENST00000394258 DYNLT1P63172 113 aa20.66■□□□□ 0.9
RCCD1-201ENST00000394258 IGBP1P78318 339 aa20.66■□□□□ 0.9
RCCD1-201ENST00000394258 ZKSCAN8Q15776 578 aaPredicted RBP20.66■□□□□ 0.9
RCCD1-201ENST00000394258 Q3C1V9 767 aa20.66■□□□□ 0.9
RCCD1-201ENST00000394258 RCOR2Q8IZ40 523 aa20.66■□□□□ 0.9
RCCD1-201ENST00000394258 SPATA33Q96N06 139 aa20.66■□□□□ 0.9
RCCD1-201ENST00000394258 ASCC2Q9H1I8 757 aaPredicted RBP20.66■□□□□ 0.9
RCCD1-201ENST00000394258 LIASO43766 372 aa20.65■□□□□ 0.9
RCCD1-201ENST00000394258 IFNB1P01574 187 aa20.65■□□□□ 0.9
RCCD1-201ENST00000394258 HOXC6P09630 235 aa20.65■□□□□ 0.9
RCCD1-201ENST00000394258 TGFB3P10600 412 aa20.65■□□□□ 0.9
RCCD1-201ENST00000394258 BRAFP15056 766 aa20.65■□□□□ 0.9
RCCD1-201ENST00000394258 KLRC2P26717 231 aa20.65■□□□□ 0.9
RCCD1-201ENST00000394258 KCNT1Q5JUK3 1230 aa20.65■□□□□ 0.9
RCCD1-201ENST00000394258 DENND1BQ6P3S1 775 aa20.65■□□□□ 0.9
RCCD1-201ENST00000394258 TAB3Q8N5C8 712 aaPredicted RBP20.65■□□□□ 0.9
RCCD1-201ENST00000394258 MINDY3Q9H8M7 445 aa20.65■□□□□ 0.9
RCCD1-201ENST00000394258 ZWILCHQ9H900 591 aa20.65■□□□□ 0.9
RCCD1-201ENST00000394258 MCM8Q9UJA3 840 aa20.65■□□□□ 0.9
RCCD1-201ENST00000394258 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.65■□□□□ 0.9
RCCD1-201ENST00000394258 ABLIM1O14639 778 aa20.65■□□□□ 0.9
RCCD1-201ENST00000394258 HGSO14964 777 aaPredicted RBP20.65■□□□□ 0.9
RCCD1-201ENST00000394258 CALB1P05937 261 aa20.65■□□□□ 0.9
RCCD1-201ENST00000394258 RPSAP08865 295 aaKnown RBP20.65■□□□□ 0.9
RCCD1-201ENST00000394258 CXCL8P10145 99 aa20.65■□□□□ 0.9
RCCD1-201ENST00000394258 ARSEP51690 589 aa20.65■□□□□ 0.9
RCCD1-201ENST00000394258 LACTBP83111 547 aaPredicted RBP20.65■□□□□ 0.9
RCCD1-201ENST00000394258 FAM228AQ86W67 206 aa20.65■□□□□ 0.9
RCCD1-201ENST00000394258 SRRM1Q8IYB3 904 aaKnown RBP20.65■□□□□ 0.9
RCCD1-201ENST00000394258 KCNN1Q92952 543 aa20.65■□□□□ 0.9
RCCD1-201ENST00000394258 NAALADL1Q9UQQ1 740 aa20.65■□□□□ 0.9
RCCD1-201ENST00000394258 CAV1Q03135 178 aa20.64■□□□□ 0.9
RCCD1-201ENST00000394258 MXD4Q14582 209 aaPredicted RBP20.64■□□□□ 0.9
RCCD1-201ENST00000394258 ATF7IP2Q5U623 682 aa20.64■□□□□ 0.9
RCCD1-201ENST00000394258 NUGGCQ68CJ6 796 aa20.64■□□□□ 0.9
RCCD1-201ENST00000394258 SPOCD1Q6ZMY3 1216 aa20.64■□□□□ 0.9
RCCD1-201ENST00000394258 GPC2Q8N158 579 aa20.64■□□□□ 0.9
RCCD1-201ENST00000394258 MRRFQ96E11 262 aaKnown RBP20.64■□□□□ 0.9
RCCD1-201ENST00000394258 TMEM121Q9BTD3 319 aa20.64■□□□□ 0.9
RCCD1-201ENST00000394258 ADAM33Q9BZ11 813 aa20.64■□□□□ 0.9
RCCD1-201ENST00000394258 PPP2R3BQ9Y5P8 575 aa20.64■□□□□ 0.9
RCCD1-201ENST00000394258 SOCS7O14512 581 aa20.64■□□□□ 0.89
RCCD1-201ENST00000394258 SNX3O60493 162 aa20.64■□□□□ 0.89
RCCD1-201ENST00000394258 TJP3O95049 919 aa20.64■□□□□ 0.89
RCCD1-201ENST00000394258 RFC1P35251 1148 aaPredicted RBP20.64■□□□□ 0.89
RCCD1-201ENST00000394258 ASPAP45381 313 aa20.64■□□□□ 0.89
RCCD1-201ENST00000394258 MCL1Q07820 350 aa20.64■□□□□ 0.89
RCCD1-201ENST00000394258 GPS1Q13098 491 aa20.64■□□□□ 0.89
RCCD1-201ENST00000394258 WDR72Q3MJ13 1102 aa20.64■□□□□ 0.89
RCCD1-201ENST00000394258 RBM41Q96IZ5 413 aaKnown RBP20.64■□□□□ 0.89
RCCD1-201ENST00000394258 XYLT2Q9H1B5 865 aa20.64■□□□□ 0.89
RCCD1-201ENST00000394258 SAYSD1Q9NPB0 183 aa20.64■□□□□ 0.89
RCCD1-201ENST00000394258 PDGFCQ9NRA1 345 aa20.64■□□□□ 0.89
RCCD1-201ENST00000394258 AGAP1Q9UPQ3 857 aa20.64■□□□□ 0.89
RCCD1-201ENST00000394258 MCM3APO60318 1980 aa20.63■□□□□ 0.89
RCCD1-201ENST00000394258 AP3M2P53677 418 aa20.63■□□□□ 0.89
RCCD1-201ENST00000394258 CELF3Q5SZQ8 465 aaKnown RBP20.63■□□□□ 0.89
RCCD1-201ENST00000394258 DPH6Q7L8W6 267 aa20.63■□□□□ 0.89
RCCD1-201ENST00000394258 TRPM8Q7Z2W7 1104 aa20.63■□□□□ 0.89
RCCD1-201ENST00000394258 TCP11Q8WWU5 503 aa20.63■□□□□ 0.89
RCCD1-201ENST00000394258 FAM167AQ96KS9 214 aa20.63■□□□□ 0.89
RCCD1-201ENST00000394258 EVPLQ92817 2033 aa20.63■□□□□ 0.89
RCCD1-201ENST00000394258 TCRBV5S1A1TA0A578 114 aa20.63■□□□□ 0.89
RCCD1-201ENST00000394258 GOLGA8MH3BSY2 632 aa20.63■□□□□ 0.89
RCCD1-201ENST00000394258 ITGBL1O95965 494 aaPredicted RBP20.63■□□□□ 0.89
RCCD1-201ENST00000394258 IQCF3P0C7M6 154 aa20.63■□□□□ 0.89
RCCD1-201ENST00000394258 MAGEA4P43358 317 aa20.63■□□□□ 0.89
RCCD1-201ENST00000394258 ITIH4Q14624 930 aa20.63■□□□□ 0.89
RCCD1-201ENST00000394258 FASTKD3Q14CZ7 662 aaKnown RBP20.63■□□□□ 0.89
RCCD1-201ENST00000394258 PREPLQ4J6C6 727 aaPredicted RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms