RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 TMEM150AQ86TG1 271 aa16.65■□□□□ 0.26
CHMP3-202ENST00000393773 RIN3Q8TB24 985 aa16.65■□□□□ 0.26
CHMP3-202ENST00000393773 DDX1Q92499 740 aaKnown RBP16.65■□□□□ 0.26
CHMP3-202ENST00000393773 ZSCAN31Q96LW9 406 aaPredicted RBP16.65■□□□□ 0.26
CHMP3-202ENST00000393773 FAM83CQ9BQN1 747 aa16.65■□□□□ 0.26
CHMP3-202ENST00000393773 RXFP3Q9NSD7 469 aa16.65■□□□□ 0.26
CHMP3-202ENST00000393773 SPEGQ15772 3267 aa16.65■□□□□ 0.26
CHMP3-202ENST00000393773 ASPMQ8IZT6 3477 aa16.65■□□□□ 0.26
CHMP3-202ENST00000393773 TNRC6BQ9UPQ9 1833 aaKnown RBP16.64■□□□□ 0.25
CHMP3-202ENST00000393773 CCDC163A0A0D9SF12 145 aa16.64■□□□□ 0.25
CHMP3-202ENST00000393773 VWA3AA6NCI4 1184 aa16.64■□□□□ 0.25
CHMP3-202ENST00000393773 PAX3P23760 479 aa16.64■□□□□ 0.25
CHMP3-202ENST00000393773 PMLP29590 882 aa16.64■□□□□ 0.25
CHMP3-202ENST00000393773 CDR1P51861 262 aa16.64■□□□□ 0.25
CHMP3-202ENST00000393773 ZNF131P52739 623 aa16.64■□□□□ 0.25
CHMP3-202ENST00000393773 TMEM132DQ14C87 1099 aa16.64■□□□□ 0.25
CHMP3-202ENST00000393773 CCDC6Q16204 474 aa16.64■□□□□ 0.25
CHMP3-202ENST00000393773 MGAT5BQ3V5L5 792 aa16.64■□□□□ 0.25
CHMP3-202ENST00000393773 AASDHQ4L235 1098 aaPredicted RBP16.64■□□□□ 0.25
CHMP3-202ENST00000393773 KBTBD6Q86V97 674 aa16.64■□□□□ 0.25
CHMP3-202ENST00000393773 LOXL4Q96JB6 756 aa16.64■□□□□ 0.25
CHMP3-202ENST00000393773 GCNAQ96QF7 691 aa16.64■□□□□ 0.25
CHMP3-202ENST00000393773 FIZ1Q96SL8 496 aa16.64■□□□□ 0.25
CHMP3-202ENST00000393773 KIF2CQ99661 725 aa16.64■□□□□ 0.25
CHMP3-202ENST00000393773 MSTO1Q9BUK6 570 aa16.64■□□□□ 0.25
CHMP3-202ENST00000393773 SLC46A2Q9BY10 475 aa16.64■□□□□ 0.25
CHMP3-202ENST00000393773 ARRDC1-AS1Q9H2J1 176 aa16.64■□□□□ 0.25
CHMP3-202ENST00000393773 CCL26Q9Y258 94 aa16.64■□□□□ 0.25
CHMP3-202ENST00000393773 DERAQ9Y315 318 aa16.64■□□□□ 0.25
CHMP3-202ENST00000393773 WDFY3Q8IZQ1 3526 aa16.64■□□□□ 0.25
CHMP3-202ENST00000393773 OTOL1A6NHN0 477 aaPredicted RBP16.63■□□□□ 0.25
CHMP3-202ENST00000393773 TM4SF5O14894 197 aa16.63■□□□□ 0.25
CHMP3-202ENST00000393773 RPP40O75818 363 aaKnown RBP16.63■□□□□ 0.25
CHMP3-202ENST00000393773 ZNF806P0C7X5 589 aa16.63■□□□□ 0.25
CHMP3-202ENST00000393773 SCP2P22307 547 aa16.63■□□□□ 0.25
CHMP3-202ENST00000393773 KCNA4P22459 653 aa16.63■□□□□ 0.25
CHMP3-202ENST00000393773 PXNP49023 591 aaPredicted RBP16.63■□□□□ 0.25
CHMP3-202ENST00000393773 TUFMP49411 452 aaKnown RBP16.63■□□□□ 0.25
CHMP3-202ENST00000393773 RILPL1Q5EBL4 403 aa16.63■□□□□ 0.25
CHMP3-202ENST00000393773 PLA2G2CQ5R387 149 aa16.63■□□□□ 0.25
CHMP3-202ENST00000393773 CD302Q8IX05 232 aa16.63■□□□□ 0.25
CHMP3-202ENST00000393773 CMTM8Q8IZV2 173 aa16.63■□□□□ 0.25
CHMP3-202ENST00000393773 CCSER1Q9C0I3 900 aa16.63■□□□□ 0.25
CHMP3-202ENST00000393773 DSEQ9UL01 958 aa16.63■□□□□ 0.25
CHMP3-202ENST00000393773 TRDMT1O14717 391 aaKnown RBP16.62■□□□□ 0.25
CHMP3-202ENST00000393773 AXIN1O15169 862 aa16.62■□□□□ 0.25
CHMP3-202ENST00000393773 AKAP3O75969 853 aa16.62■□□□□ 0.25
CHMP3-202ENST00000393773 HAPLN1P10915 354 aaPredicted RBP16.62■□□□□ 0.25
CHMP3-202ENST00000393773 HMGA1P17096 107 aaKnown RBP16.62■□□□□ 0.25
CHMP3-202ENST00000393773 NMT1P30419 496 aaKnown RBP16.62■□□□□ 0.25
CHMP3-202ENST00000393773 RUNX3Q13761 415 aa16.62■□□□□ 0.25
CHMP3-202ENST00000393773 N4BP2L1Q5TBK1 243 aaPredicted RBP16.62■□□□□ 0.25
CHMP3-202ENST00000393773 TRIM68Q6AZZ1 485 aa16.62■□□□□ 0.25
CHMP3-202ENST00000393773 IL31Q6EBC2 164 aa16.62■□□□□ 0.25
CHMP3-202ENST00000393773 CACNA2D4Q7Z3S7 1137 aa16.62■□□□□ 0.25
CHMP3-202ENST00000393773 LRRTM3Q86VH5 581 aa16.62■□□□□ 0.25
CHMP3-202ENST00000393773 GPBP1Q86WP2 473 aa16.62■□□□□ 0.25
CHMP3-202ENST00000393773 SPPL2BQ8TCT7 592 aa16.62■□□□□ 0.25
CHMP3-202ENST00000393773 GIPC2Q8TF65 315 aa16.62■□□□□ 0.25
CHMP3-202ENST00000393773 C2orf15Q8WU43 125 aaKnown RBP16.62■□□□□ 0.25
CHMP3-202ENST00000393773 USP13Q92995 863 aaPredicted RBP16.62■□□□□ 0.25
CHMP3-202ENST00000393773 FAM212AQ96EL1 285 aa16.62■□□□□ 0.25
CHMP3-202ENST00000393773 CDK5RAP3Q96JB5 506 aa16.62■□□□□ 0.25
CHMP3-202ENST00000393773 EBF3Q9H4W6 596 aa16.62■□□□□ 0.25
CHMP3-202ENST00000393773 GKN1Q9NS71 199 aa16.62■□□□□ 0.25
CHMP3-202ENST00000393773 THG1LQ9NWX6 298 aaKnown RBP16.62■□□□□ 0.25
CHMP3-202ENST00000393773 ZMYM5Q9UJ78 669 aa16.62■□□□□ 0.25
CHMP3-202ENST00000393773 ANGPTL2Q9UKU9 493 aa16.62■□□□□ 0.25
CHMP3-202ENST00000393773 C2CD2Q9Y426 696 aa16.62■□□□□ 0.25
CHMP3-202ENST00000393773 FAM208BQ5VWN6 2430 aa16.62■□□□□ 0.25
CHMP3-202ENST00000393773 PLXND1Q9Y4D7 1925 aa16.62■□□□□ 0.25
CHMP3-202ENST00000393773 AKAP13Q12802 2813 aa16.62■□□□□ 0.25
CHMP3-202ENST00000393773 THADAQ6YHU6 1953 aa16.62■□□□□ 0.25
CHMP3-202ENST00000393773 IGF2RP11717 2491 aa16.61■□□□□ 0.25
CHMP3-202ENST00000393773 TISP43B9A030 160 aa16.61■□□□□ 0.25
CHMP3-202ENST00000393773 EIF5BO60841 1220 aaKnown RBP16.61■□□□□ 0.25
CHMP3-202ENST00000393773 TADA3O75528 432 aa16.61■□□□□ 0.25
CHMP3-202ENST00000393773 NLRP12P59046 1061 aa16.61■□□□□ 0.25
CHMP3-202ENST00000393773 SHC2P98077 582 aa16.61■□□□□ 0.25
CHMP3-202ENST00000393773 ARL6IP4Q66PJ3 421 aaKnown RBP16.61■□□□□ 0.25
CHMP3-202ENST00000393773 C12orf50Q8NA57 414 aaPredicted RBP16.61■□□□□ 0.25
CHMP3-202ENST00000393773 STKLD1Q8NE28 680 aa16.61■□□□□ 0.25
CHMP3-202ENST00000393773 ZC3H10Q96K80 434 aaKnown RBP16.61■□□□□ 0.25
CHMP3-202ENST00000393773 PYM1Q9BRP8 204 aaKnown RBP16.61■□□□□ 0.25
CHMP3-202ENST00000393773 SMOC1Q9H4F8 434 aa16.61■□□□□ 0.25
CHMP3-202ENST00000393773 ASB7Q9H672 318 aa16.61■□□□□ 0.25
CHMP3-202ENST00000393773 KIF9Q9HAQ2 790 aa16.61■□□□□ 0.25
CHMP3-202ENST00000393773 PARVGQ9HBI0 331 aa16.61■□□□□ 0.25
CHMP3-202ENST00000393773 BLOC1S4Q9NUP1 217 aa16.61■□□□□ 0.25
CHMP3-202ENST00000393773 POLR3BQ9NW08 1133 aaPredicted RBP16.61■□□□□ 0.25
CHMP3-202ENST00000393773 ABI2Q9NYB9 513 aaPredicted RBP16.61■□□□□ 0.25
CHMP3-202ENST00000393773 ANKRD63C9JTQ0 380 aa16.6■□□□□ 0.25
CHMP3-202ENST00000393773 CYB561D2O14569 222 aa16.6■□□□□ 0.25
CHMP3-202ENST00000393773 SLC26A4O43511 780 aa16.6■□□□□ 0.25
CHMP3-202ENST00000393773 TRAK2O60296 914 aa16.6■□□□□ 0.25
CHMP3-202ENST00000393773 RNF40O75150 1001 aa16.6■□□□□ 0.25
CHMP3-202ENST00000393773 FAM13AO94988 1023 aa16.6■□□□□ 0.25
CHMP3-202ENST00000393773 EGFP01133 1207 aa16.6■□□□□ 0.25
CHMP3-202ENST00000393773 F11P03951 625 aa16.6■□□□□ 0.25
CHMP3-202ENST00000393773 CCDC192P0DO97 292 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms