RNA–Protein interactions for RNA: ENST00000392000.4

LRRFIP1-204, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRRFIP1, Length 3,365 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-204ENST00000392000 MEI4A8MW99 385 aa15.31■□□□□ 0.04
LRRFIP1-204ENST00000392000 B2RBV5 119 aa15.31■□□□□ 0.04
LRRFIP1-204ENST00000392000 AVILO75366 819 aa15.31■□□□□ 0.04
LRRFIP1-204ENST00000392000 ALDH18A1P54886 795 aaKnown RBP15.31■□□□□ 0.04
LRRFIP1-204ENST00000392000 HIF1AQ16665 826 aa15.31■□□□□ 0.04
LRRFIP1-204ENST00000392000 RNF43Q68DV7 783 aa15.31■□□□□ 0.04
LRRFIP1-204ENST00000392000 CENPUQ71F23 418 aa15.31■□□□□ 0.04
LRRFIP1-204ENST00000392000 ALYREFQ86V81 257 aaKnown RBP15.31■□□□□ 0.04
LRRFIP1-204ENST00000392000 PPM1NQ8N819 430 aa15.31■□□□□ 0.04
LRRFIP1-204ENST00000392000 TRIM55Q9BYV6 548 aa15.31■□□□□ 0.04
LRRFIP1-204ENST00000392000 PRKAG3Q9UGI9 489 aa15.31■□□□□ 0.04
LRRFIP1-204ENST00000392000 MAGED2Q9UNF1 606 aaPredicted RBP15.31■□□□□ 0.04
LRRFIP1-204ENST00000392000 EDF1O60869 148 aaKnown RBP15.31■□□□□ 0.04
LRRFIP1-204ENST00000392000 HLA-DRAP01903 254 aa15.31■□□□□ 0.04
LRRFIP1-204ENST00000392000 WEE2P0C1S8 567 aa15.31■□□□□ 0.04
LRRFIP1-204ENST00000392000 ATXN3P54252 364 aaPredicted RBP15.31■□□□□ 0.04
LRRFIP1-204ENST00000392000 RBBP5Q15291 538 aaKnown RBP15.31■□□□□ 0.04
LRRFIP1-204ENST00000392000 CDO1Q16878 200 aa15.31■□□□□ 0.04
LRRFIP1-204ENST00000392000 SLC39A4Q6P5W5 647 aa15.31■□□□□ 0.04
LRRFIP1-204ENST00000392000 RHBDF2Q6PJF5 856 aa15.31■□□□□ 0.04
LRRFIP1-204ENST00000392000 TMEM161BQ8NDZ6 487 aa15.31■□□□□ 0.04
LRRFIP1-204ENST00000392000 TMEM109Q9BVC6 243 aa15.31■□□□□ 0.04
LRRFIP1-204ENST00000392000 TSSK1BQ9BXA7 367 aa15.31■□□□□ 0.04
LRRFIP1-204ENST00000392000 NXF1Q9UBU9 619 aaKnown RBP15.31■□□□□ 0.04
LRRFIP1-204ENST00000392000 PPP1R1BQ9UD71 204 aaPredicted RBP15.31■□□□□ 0.04
LRRFIP1-204ENST00000392000 SCOCQ9UIL1 159 aa15.31■□□□□ 0.04
LRRFIP1-204ENST00000392000 RIPK3Q9Y572 518 aa15.31■□□□□ 0.04
LRRFIP1-204ENST00000392000 LPXNO60711 386 aa15.3■□□□□ 0.04
LRRFIP1-204ENST00000392000 MYL2P10916 166 aa15.3■□□□□ 0.04
LRRFIP1-204ENST00000392000 BRD2P25440 801 aaKnown RBP15.3■□□□□ 0.04
LRRFIP1-204ENST00000392000 BMPR2Q13873 1038 aa15.3■□□□□ 0.04
LRRFIP1-204ENST00000392000 BAATQ14032 418 aaPredicted RBP15.3■□□□□ 0.04
LRRFIP1-204ENST00000392000 CYP1B1Q16678 543 aa15.3■□□□□ 0.04
LRRFIP1-204ENST00000392000 ZCCHC23Q6ZST2 131 aa15.3■□□□□ 0.04
LRRFIP1-204ENST00000392000 ZNF516Q92618 1163 aa15.3■□□□□ 0.04
LRRFIP1-204ENST00000392000 USP6NLQ92738 828 aa15.3■□□□□ 0.04
LRRFIP1-204ENST00000392000 GBP5Q96PP8 586 aa15.3■□□□□ 0.04
LRRFIP1-204ENST00000392000 MIPEPQ99797 713 aa15.3■□□□□ 0.04
LRRFIP1-204ENST00000392000 CADM1Q9BY67 442 aaKnown RBP15.3■□□□□ 0.04
LRRFIP1-204ENST00000392000 STK10O94804 968 aaKnown RBP15.3■□□□□ 0.04
LRRFIP1-204ENST00000392000 PGM1P36871 562 aa15.3■□□□□ 0.04
LRRFIP1-204ENST00000392000 CAP2P40123 477 aa15.3■□□□□ 0.04
LRRFIP1-204ENST00000392000 NLRP11P59045 1033 aaKnown RBP15.3■□□□□ 0.04
LRRFIP1-204ENST00000392000 MKRN3Q13064 507 aaKnown RBP15.3■□□□□ 0.04
LRRFIP1-204ENST00000392000 ACSBG2Q5FVE4 666 aa15.3■□□□□ 0.04
LRRFIP1-204ENST00000392000 EEPD1Q7L9B9 569 aa15.3■□□□□ 0.04
LRRFIP1-204ENST00000392000 FAM71DQ8N9W8 422 aa15.3■□□□□ 0.04
LRRFIP1-204ENST00000392000 FBXO36Q8NEA4 188 aa15.3■□□□□ 0.04
LRRFIP1-204ENST00000392000 AGR3Q8TD06 166 aa15.3■□□□□ 0.04
LRRFIP1-204ENST00000392000 SYTL5Q8TDW5 730 aaPredicted RBP15.3■□□□□ 0.04
LRRFIP1-204ENST00000392000 PAFAH2Q99487 392 aa15.3■□□□□ 0.04
LRRFIP1-204ENST00000392000 STOML1Q9UBI4 398 aa15.3■□□□□ 0.04
LRRFIP1-204ENST00000392000 KRT19P08727 400 aa15.3■□□□□ 0.04
LRRFIP1-204ENST00000392000 PAPOLAP51003 745 aaKnown RBP15.3■□□□□ 0.04
LRRFIP1-204ENST00000392000 HIRAP54198 1017 aaPredicted RBP15.3■□□□□ 0.04
LRRFIP1-204ENST00000392000 CLNKQ7Z7G1 428 aa15.3■□□□□ 0.04
LRRFIP1-204ENST00000392000 NLRX1Q86UT6 975 aa15.3■□□□□ 0.04
LRRFIP1-204ENST00000392000 RNF217Q8TC41 542 aa15.3■□□□□ 0.04
LRRFIP1-204ENST00000392000 MAIP1Q8WWC4 291 aa15.3■□□□□ 0.04
LRRFIP1-204ENST00000392000 TRIM56Q9BRZ2 755 aaKnown RBP15.3■□□□□ 0.04
LRRFIP1-204ENST00000392000 TMEM120AQ9BXJ8 343 aa15.3■□□□□ 0.04
LRRFIP1-204ENST00000392000 TMEM8AQ9HCN3 771 aa15.3■□□□□ 0.04
LRRFIP1-204ENST00000392000 PIH1D1Q9NWS0 290 aaKnown RBP15.3■□□□□ 0.04
LRRFIP1-204ENST00000392000 CORO1CQ9ULV4 474 aaPredicted RBP15.3■□□□□ 0.04
LRRFIP1-204ENST00000392000 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.29■□□□□ 0.04
LRRFIP1-204ENST00000392000 OPHN1O60890 802 aa15.29■□□□□ 0.04
LRRFIP1-204ENST00000392000 PROSCO94903 275 aa15.29■□□□□ 0.04
LRRFIP1-204ENST00000392000 GDF10P55107 478 aa15.29■□□□□ 0.04
LRRFIP1-204ENST00000392000 ARID3BQ8IVW6 561 aaPredicted RBP15.29■□□□□ 0.04
LRRFIP1-204ENST00000392000 ACAP3Q96P50 834 aa15.29■□□□□ 0.04
LRRFIP1-204ENST00000392000 RIT2Q99578 217 aa15.29■□□□□ 0.04
LRRFIP1-204ENST00000392000 RANBP17Q9H2T7 1088 aaKnown RBP15.29■□□□□ 0.04
LRRFIP1-204ENST00000392000 VCXQ9H320 206 aa15.29■□□□□ 0.04
LRRFIP1-204ENST00000392000 MANSC1Q9H8J5 431 aa15.29■□□□□ 0.04
LRRFIP1-204ENST00000392000 MAD1L1Q9Y6D9 718 aa15.29■□□□□ 0.04
LRRFIP1-204ENST00000392000 CST8O60676 142 aa15.29■□□□□ 0.04
LRRFIP1-204ENST00000392000 TMPRSS15P98073 1019 aa15.29■□□□□ 0.04
LRRFIP1-204ENST00000392000 MSS51Q4VC12 460 aa15.29■□□□□ 0.04
LRRFIP1-204ENST00000392000 DNAJC24Q6P3W2 148 aa15.29■□□□□ 0.04
LRRFIP1-204ENST00000392000 SLC9A9Q8IVB4 645 aa15.29■□□□□ 0.04
LRRFIP1-204ENST00000392000 POU5F2Q8N7G0 328 aa15.29■□□□□ 0.04
LRRFIP1-204ENST00000392000 GRAMD1AQ96CP6 724 aa15.29■□□□□ 0.04
LRRFIP1-204ENST00000392000 SH3GL3Q99963 347 aa15.29■□□□□ 0.04
LRRFIP1-204ENST00000392000 EXOC7Q9UPT5 735 aa15.29■□□□□ 0.04
LRRFIP1-204ENST00000392000 PTPRJQ12913 1337 aa15.29■□□□□ 0.04
LRRFIP1-204ENST00000392000 TCRBV7S3A2A0A539 114 aa15.28■□□□□ 0.04
LRRFIP1-204ENST00000392000 SPDYE2BA6NHP3 402 aa15.28■□□□□ 0.04
LRRFIP1-204ENST00000392000 ZNF862O60290 1169 aa15.28■□□□□ 0.04
LRRFIP1-204ENST00000392000 GRIN3BO60391 1043 aa15.28■□□□□ 0.04
LRRFIP1-204ENST00000392000 TBX10O75333 385 aa15.28■□□□□ 0.04
LRRFIP1-204ENST00000392000 INHBAP08476 426 aa15.28■□□□□ 0.04
LRRFIP1-204ENST00000392000 SPDYE6P0CI01 402 aa15.28■□□□□ 0.04
LRRFIP1-204ENST00000392000 PYGBP11216 843 aa15.28■□□□□ 0.04
LRRFIP1-204ENST00000392000 AMPD1P23109 780 aa15.28■□□□□ 0.04
LRRFIP1-204ENST00000392000 PTPN4P29074 926 aa15.28■□□□□ 0.04
LRRFIP1-204ENST00000392000 PSMC5P62195 406 aa15.28■□□□□ 0.04
LRRFIP1-204ENST00000392000 GTF2BQ00403 316 aa15.28■□□□□ 0.04
LRRFIP1-204ENST00000392000 ACTL9Q8TC94 416 aa15.28■□□□□ 0.04
LRRFIP1-204ENST00000392000 DDX1Q92499 740 aaKnown RBP15.28■□□□□ 0.04
LRRFIP1-204ENST00000392000 PDGFDQ9GZP0 370 aaPredicted RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms