RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 ZNF536O15090 1300 aa18.96■□□□□ 0.63
ERCC2-201ENST00000391941 CCDC195A0A1B0GUA6 201 aa18.96■□□□□ 0.63
ERCC2-201ENST00000391941 WFS1O76024 890 aa18.96■□□□□ 0.63
ERCC2-201ENST00000391941 VNN1O95497 513 aa18.96■□□□□ 0.63
ERCC2-201ENST00000391941 KITP10721 976 aa18.96■□□□□ 0.63
ERCC2-201ENST00000391941 RCN2Q14257 317 aa18.96■□□□□ 0.63
ERCC2-201ENST00000391941 PARP6Q2NL67 630 aa18.96■□□□□ 0.63
ERCC2-201ENST00000391941 STRIP1Q5VSL9 837 aa18.96■□□□□ 0.63
ERCC2-201ENST00000391941 ZC3H18Q86VM9 953 aaKnown RBP18.96■□□□□ 0.63
ERCC2-201ENST00000391941 RELL1Q8IUW5 271 aa18.96■□□□□ 0.63
ERCC2-201ENST00000391941 IGDCC3Q8IVU1 814 aa18.96■□□□□ 0.63
ERCC2-201ENST00000391941 BBOF1Q8ND07 529 aa18.96■□□□□ 0.63
ERCC2-201ENST00000391941 OR5B17Q8NGF7 314 aa18.96■□□□□ 0.63
ERCC2-201ENST00000391941 CAPN9O14815 690 aa18.96■□□□□ 0.63
ERCC2-201ENST00000391941 MAGEB2O15479 319 aa18.96■□□□□ 0.63
ERCC2-201ENST00000391941 BGNP21810 368 aa18.96■□□□□ 0.63
ERCC2-201ENST00000391941 ZBTB16Q05516 673 aa18.96■□□□□ 0.63
ERCC2-201ENST00000391941 MAP4K3Q8IVH8 894 aa18.96■□□□□ 0.63
ERCC2-201ENST00000391941 SLC25A41Q8N5S1 370 aa18.96■□□□□ 0.63
ERCC2-201ENST00000391941 CHURC1Q8WUH1 139 aa18.96■□□□□ 0.63
ERCC2-201ENST00000391941 WNK4Q96J92 1243 aa18.96■□□□□ 0.63
ERCC2-201ENST00000391941 MRIQ9BWK5 157 aa18.96■□□□□ 0.63
ERCC2-201ENST00000391941 GABBR1Q9UBS5 961 aa18.96■□□□□ 0.63
ERCC2-201ENST00000391941 NUB1Q9Y5A7 615 aa18.96■□□□□ 0.63
ERCC2-201ENST00000391941 FAM237BA0A1B0GVD1 139 aa18.95■□□□□ 0.62
ERCC2-201ENST00000391941 DCTN3O75935 186 aa18.95■□□□□ 0.62
ERCC2-201ENST00000391941 POTEJP0CG39 1038 aa18.95■□□□□ 0.62
ERCC2-201ENST00000391941 ATP6V1C1P21283 382 aa18.95■□□□□ 0.62
ERCC2-201ENST00000391941 AMPD1P23109 780 aa18.95■□□□□ 0.62
ERCC2-201ENST00000391941 CETN2P41208 172 aa18.95■□□□□ 0.62
ERCC2-201ENST00000391941 TAF5Q15542 800 aa18.95■□□□□ 0.62
ERCC2-201ENST00000391941 SNX30Q5VWJ9 437 aa18.95■□□□□ 0.62
ERCC2-201ENST00000391941 SCARA5Q6ZMJ2 495 aa18.95■□□□□ 0.62
ERCC2-201ENST00000391941 C4orf50Q6ZRC1 276 aa18.95■□□□□ 0.62
ERCC2-201ENST00000391941 KBTBD2Q8IY47 623 aa18.95■□□□□ 0.62
ERCC2-201ENST00000391941 TMEM143Q96AN5 459 aa18.95■□□□□ 0.62
ERCC2-201ENST00000391941 FAM111AQ96PZ2 611 aa18.95■□□□□ 0.62
ERCC2-201ENST00000391941 IWS1Q96ST2 819 aa18.95■□□□□ 0.62
ERCC2-201ENST00000391941 PAFAH2Q99487 392 aa18.95■□□□□ 0.62
ERCC2-201ENST00000391941 RABGEF1Q9UJ41 708 aa18.95■□□□□ 0.62
ERCC2-201ENST00000391941 CHMP2BQ9UQN3 213 aa18.95■□□□□ 0.62
ERCC2-201ENST00000391941 SMAPO00193 183 aa18.95■□□□□ 0.62
ERCC2-201ENST00000391941 TBX10O75333 385 aa18.95■□□□□ 0.62
ERCC2-201ENST00000391941 RAD17O75943 681 aa18.95■□□□□ 0.62
ERCC2-201ENST00000391941 ABHD2P08910 425 aa18.95■□□□□ 0.62
ERCC2-201ENST00000391941 NPR1P16066 1061 aa18.95■□□□□ 0.62
ERCC2-201ENST00000391941 MARK3P27448 753 aa18.95■□□□□ 0.62
ERCC2-201ENST00000391941 RPS6P62753 249 aaKnown RBP18.95■□□□□ 0.62
ERCC2-201ENST00000391941 RNASEH2BQ5TBB1 312 aaKnown RBP18.95■□□□□ 0.62
ERCC2-201ENST00000391941 ISLR2Q6UXK2 745 aa18.95■□□□□ 0.62
ERCC2-201ENST00000391941 FBXO36Q8NEA4 188 aa18.95■□□□□ 0.62
ERCC2-201ENST00000391941 CLEC4DQ8WXI8 215 aa18.95■□□□□ 0.62
ERCC2-201ENST00000391941 FAM81BQ96LP2 452 aa18.95■□□□□ 0.62
ERCC2-201ENST00000391941 MFSD14AQ96MC6 490 aa18.95■□□□□ 0.62
ERCC2-201ENST00000391941 FNBP1Q96RU3 617 aa18.95■□□□□ 0.62
ERCC2-201ENST00000391941 SPATS2LQ9NUQ6 558 aaKnown RBP18.95■□□□□ 0.62
ERCC2-201ENST00000391941 A0A1B0GVG6 124 aa18.95■□□□□ 0.62
ERCC2-201ENST00000391941 NPM3O75607 178 aaKnown RBP18.95■□□□□ 0.62
ERCC2-201ENST00000391941 CYP1A1P04798 512 aaPredicted RBP18.95■□□□□ 0.62
ERCC2-201ENST00000391941 UBTFL6P0CB48 400 aaPredicted RBP18.95■□□□□ 0.62
ERCC2-201ENST00000391941 KATNAL2Q8IYT4 538 aa18.95■□□□□ 0.62
ERCC2-201ENST00000391941 GPD1LQ8N335 351 aa18.95■□□□□ 0.62
ERCC2-201ENST00000391941 RIBC1Q8N443 379 aaPredicted RBP18.95■□□□□ 0.62
ERCC2-201ENST00000391941 ALLCQ8N6M5 410 aa18.95■□□□□ 0.62
ERCC2-201ENST00000391941 RBBP8NLQ8NC74 664 aaPredicted RBP18.95■□□□□ 0.62
ERCC2-201ENST00000391941 SCG3Q8WXD2 468 aaKnown RBP18.95■□□□□ 0.62
ERCC2-201ENST00000391941 ZNF668Q96K58 619 aaPredicted RBP18.95■□□□□ 0.62
ERCC2-201ENST00000391941 MOV10L1Q9BXT6 1211 aaKnown RBP18.95■□□□□ 0.62
ERCC2-201ENST00000391941 TMX4Q9H1E5 349 aaPredicted RBP18.95■□□□□ 0.62
ERCC2-201ENST00000391941 SERPINA10Q9UK55 444 aa18.95■□□□□ 0.62
ERCC2-201ENST00000391941 EXOC7Q9UPT5 735 aa18.95■□□□□ 0.62
ERCC2-201ENST00000391941 PRPF4O43172 522 aaKnown RBP eCLIP18.94■□□□□ 0.621e-6■■■■■ 41.2
ERCC2-201ENST00000391941 TOP3BO95985 862 aaKnown RBP18.94■□□□□ 0.62
ERCC2-201ENST00000391941 ACO1P21399 889 aaKnown RBP18.94■□□□□ 0.62
ERCC2-201ENST00000391941 SNRPFP62306 86 aaKnown RBP18.94■□□□□ 0.62
ERCC2-201ENST00000391941 HIF1AQ16665 826 aa18.94■□□□□ 0.62
ERCC2-201ENST00000391941 ZNF276Q8N554 614 aa18.94■□□□□ 0.62
ERCC2-201ENST00000391941 PYROXD1Q8WU10 500 aa18.94■□□□□ 0.62
ERCC2-201ENST00000391941 SERAC1Q96JX3 654 aa18.94■□□□□ 0.62
ERCC2-201ENST00000391941 CYLDQ9NQC7 956 aa18.94■□□□□ 0.62
ERCC2-201ENST00000391941 TTLL13PA6NNM8 815 aa18.94■□□□□ 0.62
ERCC2-201ENST00000391941 PIK3R2O00459 728 aa18.94■□□□□ 0.62
ERCC2-201ENST00000391941 NVLO15381 856 aaKnown RBP18.94■□□□□ 0.62
ERCC2-201ENST00000391941 GYG2O15488 501 aa18.94■□□□□ 0.62
ERCC2-201ENST00000391941 ATP5HO75947 161 aa18.94■□□□□ 0.62
ERCC2-201ENST00000391941 TMEM63AO94886 807 aa18.94■□□□□ 0.62
ERCC2-201ENST00000391941 PTPN4P29074 926 aa18.94■□□□□ 0.62
ERCC2-201ENST00000391941 NEK3P51956 506 aa18.94■□□□□ 0.62
ERCC2-201ENST00000391941 GCNT1Q02742 428 aa18.94■□□□□ 0.62
ERCC2-201ENST00000391941 WDR44Q5JSH3 913 aa18.94■□□□□ 0.62
ERCC2-201ENST00000391941 FOXB2Q5VYV0 432 aa18.94■□□□□ 0.62
ERCC2-201ENST00000391941 SPOCD1Q6ZMY3 1216 aa18.94■□□□□ 0.62
ERCC2-201ENST00000391941 CCNJLQ8IV13 435 aa18.94■□□□□ 0.62
ERCC2-201ENST00000391941 OGFOD1Q8N543 542 aa18.94■□□□□ 0.62
ERCC2-201ENST00000391941 EMC1Q8N766 993 aa18.94■□□□□ 0.62
ERCC2-201ENST00000391941 ZNF341Q9BYN7 854 aa18.94■□□□□ 0.62
ERCC2-201ENST00000391941 PSMC3IPQ9P2W1 217 aaPredicted RBP18.94■□□□□ 0.62
ERCC2-201ENST00000391941 PCSK1NQ9UHG2 260 aa18.94■□□□□ 0.62
ERCC2-201ENST00000391941 NRXN2Q9P2S2 1712 aa18.94■□□□□ 0.62
ERCC2-201ENST00000391941 PSTPIP1O43586 416 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms