RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 H2AFY2Q9P0M6 372 aaPredicted RBP16.83■□□□□ 0.28
SHANK1-204ENST00000391814 IGSF1Q8N6C5 1336 aa16.83■□□□□ 0.28
SHANK1-204ENST00000391814 MOCS2O96007 188 aaPredicted RBP16.83■□□□□ 0.28
SHANK1-204ENST00000391814 CD44P16070 742 aaKnown RBP16.83■□□□□ 0.28
SHANK1-204ENST00000391814 DCAF4L1Q3SXM0 396 aa16.83■□□□□ 0.28
SHANK1-204ENST00000391814 TSGA10IPQ3SY00 556 aa16.83■□□□□ 0.28
SHANK1-204ENST00000391814 CENPPQ6IPU0 288 aa16.83■□□□□ 0.28
SHANK1-204ENST00000391814 FUKQ8N0W3 1084 aa16.83■□□□□ 0.28
SHANK1-204ENST00000391814 ATG4AQ8WYN0 398 aa16.83■□□□□ 0.28
SHANK1-204ENST00000391814 ATP7BP35670 1465 aa16.83■□□□□ 0.28
SHANK1-204ENST00000391814 A8MXQ7 604 aa16.82■□□□□ 0.28
SHANK1-204ENST00000391814 FAM153BP0C7A2 387 aa16.82■□□□□ 0.28
SHANK1-204ENST00000391814 RCAN1P53805 252 aa16.82■□□□□ 0.28
SHANK1-204ENST00000391814 PLIN5Q00G26 463 aa16.82■□□□□ 0.28
SHANK1-204ENST00000391814 FAM153CQ494X1 144 aa16.82■□□□□ 0.28
SHANK1-204ENST00000391814 MIER2Q8N344 545 aa16.82■□□□□ 0.28
SHANK1-204ENST00000391814 C19orf18Q8NEA5 215 aa16.82■□□□□ 0.28
SHANK1-204ENST00000391814 ZNF668Q96K58 619 aaPredicted RBP16.82■□□□□ 0.28
SHANK1-204ENST00000391814 CDCA7Q9BWT1 371 aaPredicted RBP16.82■□□□□ 0.28
SHANK1-204ENST00000391814 CDC42EP4Q9H3Q1 356 aaKnown RBP16.82■□□□□ 0.28
SHANK1-204ENST00000391814 RAD21L1Q9H4I0 556 aa16.82■□□□□ 0.28
SHANK1-204ENST00000391814 SPRP35270 261 aaPredicted RBP16.82■□□□□ 0.28
SHANK1-204ENST00000391814 CENPLQ8N0S6 344 aaPredicted RBP16.82■□□□□ 0.28
SHANK1-204ENST00000391814 TSPAN17Q96FV3 270 aa16.82■□□□□ 0.28
SHANK1-204ENST00000391814 FOXP3Q9BZS1 431 aa16.82■□□□□ 0.28
SHANK1-204ENST00000391814 SPAG6O75602 509 aa16.82■□□□□ 0.28
SHANK1-204ENST00000391814 LCA5LO95447 670 aa16.82■□□□□ 0.28
SHANK1-204ENST00000391814 TNFAIP2Q03169 654 aa16.82■□□□□ 0.28
SHANK1-204ENST00000391814 SLC20A2Q08357 652 aa16.82■□□□□ 0.28
SHANK1-204ENST00000391814 MIGA2Q7L4E1 593 aa16.82■□□□□ 0.28
SHANK1-204ENST00000391814 SIK2Q9H0K1 926 aa16.82■□□□□ 0.28
SHANK1-204ENST00000391814 CDK12Q9NYV4 1490 aaPredicted RBP16.82■□□□□ 0.28
SHANK1-204ENST00000391814 TNFAIP8O95379 198 aa16.82■□□□□ 0.28
SHANK1-204ENST00000391814 IL12RB1P42701 662 aa16.82■□□□□ 0.28
SHANK1-204ENST00000391814 ITGADQ13349 1161 aa16.82■□□□□ 0.28
SHANK1-204ENST00000391814 SGSM1Q2NKQ1 1148 aa16.82■□□□□ 0.28
SHANK1-204ENST00000391814 MFSD4BQ5TF39 518 aa16.82■□□□□ 0.28
SHANK1-204ENST00000391814 AGAP11Q8TF27 550 aa16.82■□□□□ 0.28
SHANK1-204ENST00000391814 UBASH3BQ8TF42 649 aa16.82■□□□□ 0.28
SHANK1-204ENST00000391814 FAM20AQ96MK3 541 aa16.82■□□□□ 0.28
SHANK1-204ENST00000391814 CYP39A1Q9NYL5 469 aa16.82■□□□□ 0.28
SHANK1-204ENST00000391814 E9PBE3 544 aa16.82■□□□□ 0.28
SHANK1-204ENST00000391814 ZNF609O15014 1411 aa16.82■□□□□ 0.28
SHANK1-204ENST00000391814 KLHL41O60662 606 aa16.82■□□□□ 0.28
SHANK1-204ENST00000391814 TRAF2Q12933 501 aa16.82■□□□□ 0.28
SHANK1-204ENST00000391814 PIGHQ14442 188 aaPredicted RBP16.82■□□□□ 0.28
SHANK1-204ENST00000391814 USP49Q70CQ1 688 aa16.82■□□□□ 0.28
SHANK1-204ENST00000391814 DEFB107AQ8IZN7 70 aa16.82■□□□□ 0.28
SHANK1-204ENST00000391814 FBXO36Q8NEA4 188 aa16.82■□□□□ 0.28
SHANK1-204ENST00000391814 CALML6Q8TD86 181 aa16.82■□□□□ 0.28
SHANK1-204ENST00000391814 NCKAP1LP55160 1127 aa16.81■□□□□ 0.28
SHANK1-204ENST00000391814 REEP2Q9BRK0 252 aa16.81■□□□□ 0.28
SHANK1-204ENST00000391814 ATP6V1B2P21281 511 aa16.81■□□□□ 0.28
SHANK1-204ENST00000391814 KCTD2Q14681 263 aa16.81■□□□□ 0.28
SHANK1-204ENST00000391814 ACAP1Q15027 740 aa16.81■□□□□ 0.28
SHANK1-204ENST00000391814 TTMPQ5BVD1 217 aa16.81■□□□□ 0.28
SHANK1-204ENST00000391814 ECSITQ9BQ95 431 aa16.81■□□□□ 0.28
SHANK1-204ENST00000391814 TPI1P60174 286 aa16.81■□□□□ 0.28
SHANK1-204ENST00000391814 PWP1Q13610 501 aa16.81■□□□□ 0.28
SHANK1-204ENST00000391814 PKN3Q6P5Z2 889 aa16.81■□□□□ 0.28
SHANK1-204ENST00000391814 DPP9Q86TI2 863 aa16.81■□□□□ 0.28
SHANK1-204ENST00000391814 WHRNQ9P202 907 aa16.81■□□□□ 0.28
SHANK1-204ENST00000391814 STAP1Q9ULZ2 295 aa16.81■□□□□ 0.28
SHANK1-204ENST00000391814 NCOA3Q9Y6Q9 1424 aa16.81■□□□□ 0.28
SHANK1-204ENST00000391814 PSTPIP1O43586 416 aa16.81■□□□□ 0.28
SHANK1-204ENST00000391814 KLHDC7AQ5VTJ3 777 aa16.81■□□□□ 0.28
SHANK1-204ENST00000391814 SLC44A5Q8NCS7 719 aa16.81■□□□□ 0.28
SHANK1-204ENST00000391814 SPATA18Q8TC71 538 aa16.81■□□□□ 0.28
SHANK1-204ENST00000391814 SCFD1Q8WVM8 642 aa16.81■□□□□ 0.28
SHANK1-204ENST00000391814 JADE3Q92613 823 aa16.81■□□□□ 0.28
SHANK1-204ENST00000391814 SLC39A10Q9ULF5 831 aa16.81■□□□□ 0.28
SHANK1-204ENST00000391814 ZHX2Q9Y6X8 837 aa16.81■□□□□ 0.28
SHANK1-204ENST00000391814 TBC1D12O60347 775 aa16.81■□□□□ 0.28
SHANK1-204ENST00000391814 HSMCR30P0CW71 290 aa16.81■□□□□ 0.28
SHANK1-204ENST00000391814 THEMIS2Q5TEJ8 643 aa16.81■□□□□ 0.28
SHANK1-204ENST00000391814 DCAF15Q66K64 600 aa16.81■□□□□ 0.28
SHANK1-204ENST00000391814 IL31Q6EBC2 164 aa16.81■□□□□ 0.28
SHANK1-204ENST00000391814 ZBTB49Q6ZSB9 765 aa16.81■□□□□ 0.28
SHANK1-204ENST00000391814 SLC13A5Q86YT5 568 aaPredicted RBP16.81■□□□□ 0.28
SHANK1-204ENST00000391814 PAK5Q9P286 719 aa16.81■□□□□ 0.28
SHANK1-204ENST00000391814 NFKBIL1Q9UBC1 381 aaPredicted RBP16.81■□□□□ 0.28
SHANK1-204ENST00000391814 TOMM70O94826 608 aa16.81■□□□□ 0.28
SHANK1-204ENST00000391814 ALOX12P18054 663 aa16.81■□□□□ 0.28
SHANK1-204ENST00000391814 GIMAP8Q8ND71 665 aaPredicted RBP16.81■□□□□ 0.28
SHANK1-204ENST00000391814 STK39Q9UEW8 545 aa16.81■□□□□ 0.28
SHANK1-204ENST00000391814 SPATA2Q9UM82 520 aa16.81■□□□□ 0.28
SHANK1-204ENST00000391814 CTDNEP1O95476 244 aa16.8■□□□□ 0.28
SHANK1-204ENST00000391814 POLBP06746 335 aa16.8■□□□□ 0.28
SHANK1-204ENST00000391814 TRMT5Q32P41 509 aaKnown RBP16.8■□□□□ 0.28
SHANK1-204ENST00000391814 SGO1Q5FBB7 561 aa16.8■□□□□ 0.28
SHANK1-204ENST00000391814 KLHL17Q6TDP4 642 aa16.8■□□□□ 0.28
SHANK1-204ENST00000391814 ZNF467Q7Z7K2 595 aaPredicted RBP16.8■□□□□ 0.28
SHANK1-204ENST00000391814 CROCCP3Q8IVE0 287 aa16.8■□□□□ 0.28
SHANK1-204ENST00000391814 SYN2Q92777 582 aaPredicted RBP16.8■□□□□ 0.28
SHANK1-204ENST00000391814 PLEKHA5Q9HAU0 1116 aa16.8■□□□□ 0.28
SHANK1-204ENST00000391814 AGO2Q9UKV8 859 aaKnown RBP16.8■□□□□ 0.28
SHANK1-204ENST00000391814 PLEKHG3A1L390 1219 aa16.8■□□□□ 0.28
SHANK1-204ENST00000391814 SYTL1Q8IYJ3 562 aa16.8■□□□□ 0.28
SHANK1-204ENST00000391814 DCPSQ96C86 337 aaKnown RBP16.8■□□□□ 0.28
SHANK1-204ENST00000391814 RMDN1Q96DB5 314 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms