RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 SPATA31A3Q5VYP0 1347 aa2.12□□□□□ -2.07
RNU6-239P-201ENST00000390990 NOTCH3Q9UM47 2321 aa2.12□□□□□ -2.07
RNU6-239P-201ENST00000390990 TTC3P53804 2025 aa2.12□□□□□ -2.07
RNU6-239P-201ENST00000390990 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP2.11□□□□□ -2.07
RNU6-239P-201ENST00000390990 QSOX1O00391 747 aa2.11□□□□□ -2.07
RNU6-239P-201ENST00000390990 TRIAP1O43715 76 aa2.11□□□□□ -2.07
RNU6-239P-201ENST00000390990 NXPH3O95157 252 aa2.11□□□□□ -2.07
RNU6-239P-201ENST00000390990 TNFRSF1BP20333 461 aa2.11□□□□□ -2.07
RNU6-239P-201ENST00000390990 LPOP22079 712 aaPredicted RBP2.11□□□□□ -2.07
RNU6-239P-201ENST00000390990 KCNJ5P48544 419 aa2.11□□□□□ -2.07
RNU6-239P-201ENST00000390990 ALDH9A1P49189 494 aa2.11□□□□□ -2.07
RNU6-239P-201ENST00000390990 PIGFQ07326 219 aa2.11□□□□□ -2.07
RNU6-239P-201ENST00000390990 ANO4Q32M45 955 aa2.11□□□□□ -2.07
RNU6-239P-201ENST00000390990 ZNF585BQ52M93 769 aa2.11□□□□□ -2.07
RNU6-239P-201ENST00000390990 C10orf25Q5T742 122 aa2.11□□□□□ -2.07
RNU6-239P-201ENST00000390990 FCRL6Q6DN72 434 aa2.11□□□□□ -2.07
RNU6-239P-201ENST00000390990 ZNF804AQ7Z570 1209 aa2.11□□□□□ -2.07
RNU6-239P-201ENST00000390990 PIP4P1Q86T03 277 aa2.11□□□□□ -2.07
RNU6-239P-201ENST00000390990 TMPRSS12Q86WS5 348 aa2.11□□□□□ -2.07
RNU6-239P-201ENST00000390990 SH3TC2Q8TF17 1288 aa2.11□□□□□ -2.07
RNU6-239P-201ENST00000390990 ATRIPQ8WXE1 791 aa2.11□□□□□ -2.07
RNU6-239P-201ENST00000390990 RAB24Q969Q5 203 aa2.11□□□□□ -2.07
RNU6-239P-201ENST00000390990 THOC3Q96J01 351 aaKnown RBP2.11□□□□□ -2.07
RNU6-239P-201ENST00000390990 TARS2Q9BW92 718 aaKnown RBP2.11□□□□□ -2.07
RNU6-239P-201ENST00000390990 IGSF5Q9NSI5 407 aa2.11□□□□□ -2.07
RNU6-239P-201ENST00000390990 JKAMPQ9P055 326 aa2.11□□□□□ -2.07
RNU6-239P-201ENST00000390990 PCDHGA2Q9Y5H1 932 aa2.11□□□□□ -2.07
RNU6-239P-201ENST00000390990 EME2A4GXA9 379 aaPredicted RBP2.1□□□□□ -2.07
RNU6-239P-201ENST00000390990 H3BNX3 289 aa2.1□□□□□ -2.07
RNU6-239P-201ENST00000390990 PPM1DO15297 605 aa2.1□□□□□ -2.07
RNU6-239P-201ENST00000390990 SLC43A1O75387 559 aa2.1□□□□□ -2.07
RNU6-239P-201ENST00000390990 TOMM40O96008 361 aa2.1□□□□□ -2.07
RNU6-239P-201ENST00000390990 PSG1P11464 419 aa2.1□□□□□ -2.07
RNU6-239P-201ENST00000390990 CYP2A6P11509 494 aaPredicted RBP2.1□□□□□ -2.07
RNU6-239P-201ENST00000390990 MTHFD1P11586 935 aaKnown RBP2.1□□□□□ -2.07
RNU6-239P-201ENST00000390990 LIPAP38571 399 aa2.1□□□□□ -2.07
RNU6-239P-201ENST00000390990 CDKN2AP42771 156 aaKnown RBP2.1□□□□□ -2.07
RNU6-239P-201ENST00000390990 PABPC1LQ4VXU2 614 aaKnown RBP2.1□□□□□ -2.07
RNU6-239P-201ENST00000390990 TOR2AQ5JU69 321 aa2.1□□□□□ -2.07
RNU6-239P-201ENST00000390990 RBM20Q5T481 1227 aaKnown RBP2.1□□□□□ -2.07
RNU6-239P-201ENST00000390990 GSG1LQ6UXU4 331 aa2.1□□□□□ -2.07
RNU6-239P-201ENST00000390990 TRIM72Q6ZMU5 477 aa2.1□□□□□ -2.07
RNU6-239P-201ENST00000390990 MAVSQ7Z434 540 aa2.1□□□□□ -2.07
RNU6-239P-201ENST00000390990 RFX6Q8HWS3 928 aa2.1□□□□□ -2.07
RNU6-239P-201ENST00000390990 ADHFE1Q8IWW8 467 aa2.1□□□□□ -2.07
RNU6-239P-201ENST00000390990 PELI3Q8N2H9 469 aa2.1□□□□□ -2.07
RNU6-239P-201ENST00000390990 IL17RDQ8NFM7 739 aa2.1□□□□□ -2.07
RNU6-239P-201ENST00000390990 PMFBP1Q8TBY8 1022 aa2.1□□□□□ -2.07
RNU6-239P-201ENST00000390990 TMEM255BQ8WV15 326 aa2.1□□□□□ -2.07
RNU6-239P-201ENST00000390990 LMBR1Q8WVP7 490 aa2.1□□□□□ -2.07
RNU6-239P-201ENST00000390990 DPF2Q92785 391 aa2.1□□□□□ -2.07
RNU6-239P-201ENST00000390990 FEZ1Q99689 392 aa2.1□□□□□ -2.07
RNU6-239P-201ENST00000390990 FAM118BQ9BPY3 351 aa2.1□□□□□ -2.07
RNU6-239P-201ENST00000390990 TINAGL1Q9GZM7 467 aaPredicted RBP2.1□□□□□ -2.07
RNU6-239P-201ENST00000390990 MANSC1Q9H8J5 431 aa2.1□□□□□ -2.07
RNU6-239P-201ENST00000390990 DUSP22Q9NRW4 184 aa2.1□□□□□ -2.07
RNU6-239P-201ENST00000390990 MRPS18AQ9NVS2 196 aaKnown RBP2.1□□□□□ -2.07
RNU6-239P-201ENST00000390990 SQORQ9Y6N5 450 aa2.1□□□□□ -2.07
RNU6-239P-201ENST00000390990 IFITM10A6NMD0 228 aa2.09□□□□□ -2.07
RNU6-239P-201ENST00000390990 GOLGA8AA7E2F4 631 aa2.09□□□□□ -2.07
RNU6-239P-201ENST00000390990 FAM171A2A8MVW0 826 aa2.09□□□□□ -2.07
RNU6-239P-201ENST00000390990 POLRMTO00411 1230 aaKnown RBP2.09□□□□□ -2.07
RNU6-239P-201ENST00000390990 SLC28A2O43868 658 aa2.09□□□□□ -2.07
RNU6-239P-201ENST00000390990 MTHFD2P13995 350 aa2.09□□□□□ -2.07
RNU6-239P-201ENST00000390990 ENGP17813 658 aa2.09□□□□□ -2.07
RNU6-239P-201ENST00000390990 ID4P47928 161 aa2.09□□□□□ -2.07
RNU6-239P-201ENST00000390990 KRTAP10-12P60413 245 aa2.09□□□□□ -2.07
RNU6-239P-201ENST00000390990 SRSF2Q01130 221 aaKnown RBP2.09□□□□□ -2.07
RNU6-239P-201ENST00000390990 TARDBPQ13148 414 aaKnown RBP eCLIP2.09□□□□□ -2.07
RNU6-239P-201ENST00000390990 ATP2B3Q16720 1220 aa2.09□□□□□ -2.07
RNU6-239P-201ENST00000390990 ZNF618Q5T7W0 954 aa2.09□□□□□ -2.07
RNU6-239P-201ENST00000390990 MEX3CQ5U5Q3 659 aaKnown RBP2.09□□□□□ -2.07
RNU6-239P-201ENST00000390990 VPS53Q5VIR6 699 aa2.09□□□□□ -2.07
RNU6-239P-201ENST00000390990 FBXL22Q6P050 247 aa2.09□□□□□ -2.07
RNU6-239P-201ENST00000390990 TAF2Q6P1X5 1199 aa2.09□□□□□ -2.07
RNU6-239P-201ENST00000390990 ZNF365Q70YC5 407 aa2.09□□□□□ -2.07
RNU6-239P-201ENST00000390990 RHOT1Q8IXI2 618 aa2.09□□□□□ -2.07
RNU6-239P-201ENST00000390990 DHX37Q8IY37 1157 aaKnown RBP2.09□□□□□ -2.07
RNU6-239P-201ENST00000390990 PPM1KQ8N3J5 372 aa2.09□□□□□ -2.07
RNU6-239P-201ENST00000390990 FAM109AQ8N4B1 249 aa2.09□□□□□ -2.07
RNU6-239P-201ENST00000390990 ZNF548Q8NEK5 533 aaPredicted RBP2.09□□□□□ -2.07
RNU6-239P-201ENST00000390990 NR4A3Q92570 626 aa2.09□□□□□ -2.07
RNU6-239P-201ENST00000390990 NINJ1Q92982 152 aa2.09□□□□□ -2.07
RNU6-239P-201ENST00000390990 FAM136AQ96C01 138 aa2.09□□□□□ -2.07
RNU6-239P-201ENST00000390990 SMOQ99835 787 aa2.09□□□□□ -2.07
RNU6-239P-201ENST00000390990 PACSIN1Q9BY11 444 aa2.09□□□□□ -2.07
RNU6-239P-201ENST00000390990 KRTAP4-3Q9BYR4 195 aa2.09□□□□□ -2.07
RNU6-239P-201ENST00000390990 POT1Q9NUX5 634 aa2.09□□□□□ -2.07
RNU6-239P-201ENST00000390990 ZBTB21Q9ULJ3 1066 aa2.09□□□□□ -2.07
RNU6-239P-201ENST00000390990 DNM3Q9UQ16 869 aa2.09□□□□□ -2.07
RNU6-239P-201ENST00000390990 CDK11AQ9UQ88 783 aaPredicted RBP2.09□□□□□ -2.07
RNU6-239P-201ENST00000390990 UTP18Q9Y5J1 556 aaKnown RBP eCLIP2.09□□□□□ -2.07
RNU6-239P-201ENST00000390990 PRSS47A8MTI9 375 aa2.08□□□□□ -2.08
RNU6-239P-201ENST00000390990 NTN3O00634 580 aaPredicted RBP2.08□□□□□ -2.08
RNU6-239P-201ENST00000390990 BRINP1O60477 761 aa2.08□□□□□ -2.08
RNU6-239P-201ENST00000390990 IL6RP08887 468 aaPredicted RBP2.08□□□□□ -2.08
RNU6-239P-201ENST00000390990 T-ENOLP0DO92 83 aa2.08□□□□□ -2.08
RNU6-239P-201ENST00000390990 CYP19A1P11511 503 aaPredicted RBP2.08□□□□□ -2.08
RNU6-239P-201ENST00000390990 BPIP17213 487 aa2.08□□□□□ -2.08
RNU6-239P-201ENST00000390990 CLCN2P51788 898 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms