RNA–Protein interactions for RNA: ENST00000390426.2

TRAV4-201, Transcript of T cell receptor alpha variable 4, humanhuman

APPRIS P1 BASIC

Gene TRAV4, Length 395 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4-201ENST00000390426 CBWD1Q9BRT8 395 aa11.54□□□□□ -0.56
TRAV4-201ENST00000390426 SMG9Q9H0W8 520 aaKnown RBP11.54□□□□□ -0.56
TRAV4-201ENST00000390426 TASP1Q9H6P5 420 aa11.54□□□□□ -0.56
TRAV4-201ENST00000390426 IL21Q9HBE4 155 aa11.54□□□□□ -0.56
TRAV4-201ENST00000390426 PRMT8Q9NR22 394 aaPredicted RBP11.54□□□□□ -0.56
TRAV4-201ENST00000390426 OLFML3Q9NRN5 406 aa11.54□□□□□ -0.56
TRAV4-201ENST00000390426 TMLHEQ9NVH6 421 aa11.54□□□□□ -0.56
TRAV4-201ENST00000390426 RBAKQ9NYW8 714 aaPredicted RBP11.54□□□□□ -0.56
TRAV4-201ENST00000390426 SCN1AP35498 2009 aa11.53□□□□□ -0.56
TRAV4-201ENST00000390426 OTOGLQ3ZCN5 2332 aa11.53□□□□□ -0.56
TRAV4-201ENST00000390426 LILRB5O75023 590 aa11.53□□□□□ -0.56
TRAV4-201ENST00000390426 PRAMEF12O95522 483 aa11.53□□□□□ -0.56
TRAV4-201ENST00000390426 LDHAP00338 332 aaKnown RBP11.53□□□□□ -0.56
TRAV4-201ENST00000390426 ITGB3P05106 788 aa11.53□□□□□ -0.56
TRAV4-201ENST00000390426 CHRNB1P11230 501 aa11.53□□□□□ -0.56
TRAV4-201ENST00000390426 GARTP22102 1010 aa11.53□□□□□ -0.56
TRAV4-201ENST00000390426 CDC25CP30307 473 aa11.53□□□□□ -0.56
TRAV4-201ENST00000390426 PNPLA4P41247 253 aa11.53□□□□□ -0.56
TRAV4-201ENST00000390426 GPR15P49685 360 aa11.53□□□□□ -0.56
TRAV4-201ENST00000390426 FCHO2Q0JRZ9 810 aa11.53□□□□□ -0.56
TRAV4-201ENST00000390426 SMARCB1Q12824 385 aa11.53□□□□□ -0.56
TRAV4-201ENST00000390426 STK38Q15208 465 aa11.53□□□□□ -0.56
TRAV4-201ENST00000390426 SDHAF4Q5VUM1 108 aa11.53□□□□□ -0.56
TRAV4-201ENST00000390426 TXNDC11Q6PKC3 985 aa11.53□□□□□ -0.56
TRAV4-201ENST00000390426 NT5DC4Q86YG4 428 aa11.53□□□□□ -0.56
TRAV4-201ENST00000390426 PDCL2Q8N4E4 241 aa11.53□□□□□ -0.56
TRAV4-201ENST00000390426 CSGALNACT2Q8N6G5 542 aa11.53□□□□□ -0.56
TRAV4-201ENST00000390426 STKLD1Q8NE28 680 aa11.53□□□□□ -0.56
TRAV4-201ENST00000390426 C2orf15Q8WU43 125 aaKnown RBP11.53□□□□□ -0.56
TRAV4-201ENST00000390426 CACTINQ8WUQ7 758 aaKnown RBP11.53□□□□□ -0.56
TRAV4-201ENST00000390426 NELL1Q92832 810 aa11.53□□□□□ -0.56
TRAV4-201ENST00000390426 GCNAQ96QF7 691 aa11.53□□□□□ -0.56
TRAV4-201ENST00000390426 PI4K2AQ9BTU6 479 aa11.53□□□□□ -0.56
TRAV4-201ENST00000390426 SLC46A2Q9BY10 475 aa11.53□□□□□ -0.56
TRAV4-201ENST00000390426 ZSCAN16Q9H4T2 348 aaPredicted RBP11.53□□□□□ -0.56
TRAV4-201ENST00000390426 C8orf33Q9H7E9 229 aaPredicted RBP11.53□□□□□ -0.56
TRAV4-201ENST00000390426 PDE11AQ9HCR9 933 aa11.53□□□□□ -0.56
TRAV4-201ENST00000390426 RBM12Q9NTZ6 932 aaKnown RBP11.53□□□□□ -0.56
TRAV4-201ENST00000390426 GTSE1Q9NYZ3 720 aa11.53□□□□□ -0.56
TRAV4-201ENST00000390426 NCDNQ9UBB6 729 aa11.53□□□□□ -0.56
TRAV4-201ENST00000390426 TFIP11Q9UBB9 837 aaKnown RBP11.53□□□□□ -0.56
TRAV4-201ENST00000390426 L1RE1Q9UN81 338 aa11.53□□□□□ -0.56
TRAV4-201ENST00000390426 PCDHB5Q9Y5E4 795 aa11.53□□□□□ -0.56
TRAV4-201ENST00000390426 PATJQ8NI35 1801 aa11.52□□□□□ -0.57
TRAV4-201ENST00000390426 FRMD3A2A2Y4 597 aa11.52□□□□□ -0.57
TRAV4-201ENST00000390426 SPECC1L-ADORA2AF8WAN1 911 aa11.52□□□□□ -0.57
TRAV4-201ENST00000390426 STX6O43752 255 aa11.52□□□□□ -0.57
TRAV4-201ENST00000390426 EXTL3O43909 919 aa11.52□□□□□ -0.57
TRAV4-201ENST00000390426 HUS1O60921 280 aa11.52□□□□□ -0.57
TRAV4-201ENST00000390426 PRPF40AO75400 957 aaKnown RBP11.52□□□□□ -0.57
TRAV4-201ENST00000390426 KRT19P08727 400 aa11.52□□□□□ -0.57
TRAV4-201ENST00000390426 TDGF1P13385 188 aa11.52□□□□□ -0.57
TRAV4-201ENST00000390426 ACAT1P24752 427 aaKnown RBP11.52□□□□□ -0.57
TRAV4-201ENST00000390426 NASPP49321 788 aaPredicted RBP11.52□□□□□ -0.57
TRAV4-201ENST00000390426 CCR3P51677 355 aa11.52□□□□□ -0.57
TRAV4-201ENST00000390426 MLLT6P55198 1093 aaPredicted RBP11.52□□□□□ -0.57
TRAV4-201ENST00000390426 FOXK2Q01167 660 aa11.52□□□□□ -0.57
TRAV4-201ENST00000390426 TSPY1Q01534 308 aa11.52□□□□□ -0.57
TRAV4-201ENST00000390426 SATB1Q01826 763 aa11.52□□□□□ -0.57
TRAV4-201ENST00000390426 TNK2Q07912 1038 aa11.52□□□□□ -0.57
TRAV4-201ENST00000390426 ALCAMQ13740 583 aa11.52□□□□□ -0.57
TRAV4-201ENST00000390426 GAS6Q14393 721 aa11.52□□□□□ -0.57
TRAV4-201ENST00000390426 ARHGAP29Q52LW3 1261 aa11.52□□□□□ -0.57
TRAV4-201ENST00000390426 FOXD4L5Q5VV16 416 aaPredicted RBP11.52□□□□□ -0.57
TRAV4-201ENST00000390426 LMBRD2Q68DH5 695 aaPredicted RBP11.52□□□□□ -0.57
TRAV4-201ENST00000390426 OSTM1Q86WC4 334 aa11.52□□□□□ -0.57
TRAV4-201ENST00000390426 CCDC65Q8IXS2 484 aa11.52□□□□□ -0.57
TRAV4-201ENST00000390426 LINC00301Q8NCQ3 95 aa11.52□□□□□ -0.57
TRAV4-201ENST00000390426 GLIS3Q8NEA6 775 aa11.52□□□□□ -0.57
TRAV4-201ENST00000390426 BPIFB1Q8TDL5 484 aa11.52□□□□□ -0.57
TRAV4-201ENST00000390426 FOXD4L4Q8WXT5 416 aaPredicted RBP11.52□□□□□ -0.57
TRAV4-201ENST00000390426 HPS3Q969F9 1004 aa11.52□□□□□ -0.57
TRAV4-201ENST00000390426 TMEM206Q9H813 350 aa11.52□□□□□ -0.57
TRAV4-201ENST00000390426 DDX43Q9NXZ2 648 aaKnown RBP11.52□□□□□ -0.57
TRAV4-201ENST00000390426 OBP2AQ9NY56 170 aa11.52□□□□□ -0.57
TRAV4-201ENST00000390426 MAGED2Q9UNF1 606 aaPredicted RBP11.52□□□□□ -0.57
TRAV4-201ENST00000390426 SMG5Q9UPR3 1016 aaKnown RBP11.52□□□□□ -0.57
TRAV4-201ENST00000390426 MORC2Q9Y6X9 1032 aaPredicted RBP11.52□□□□□ -0.57
TRAV4-201ENST00000390426 ANK1P16157 1881 aa11.52□□□□□ -0.57
TRAV4-201ENST00000390426 TICRRQ7Z2Z1 1910 aa11.52□□□□□ -0.57
TRAV4-201ENST00000390426 FANCMQ8IYD8 2048 aa11.52□□□□□ -0.57
TRAV4-201ENST00000390426 COL4A2P08572 1712 aa11.52□□□□□ -0.57
TRAV4-201ENST00000390426 TSC2P49815 1807 aa11.51□□□□□ -0.57
TRAV4-201ENST00000390426 CFAP54Q96N23 3096 aa11.51□□□□□ -0.57
TRAV4-201ENST00000390426 MYBPHLA2RUH7 354 aa11.51□□□□□ -0.57
TRAV4-201ENST00000390426 K7ELQ4 463 aaPredicted RBP11.51□□□□□ -0.57
TRAV4-201ENST00000390426 SPTLC2O15270 562 aa11.51□□□□□ -0.57
TRAV4-201ENST00000390426 F11P03951 625 aa11.51□□□□□ -0.57
TRAV4-201ENST00000390426 TMEM191BP0C7N4 346 aa11.51□□□□□ -0.57
TRAV4-201ENST00000390426 HMGA1P17096 107 aaKnown RBP11.51□□□□□ -0.57
TRAV4-201ENST00000390426 CYP2F1P24903 491 aa11.51□□□□□ -0.57
TRAV4-201ENST00000390426 WEE1P30291 646 aa11.51□□□□□ -0.57
TRAV4-201ENST00000390426 CTHP32929 405 aa11.51□□□□□ -0.57
TRAV4-201ENST00000390426 CXCL12P48061 93 aa11.51□□□□□ -0.57
TRAV4-201ENST00000390426 NRLP54845 237 aa11.51□□□□□ -0.57
TRAV4-201ENST00000390426 RBP5P82980 135 aa11.51□□□□□ -0.57
TRAV4-201ENST00000390426 MYL7Q01449 175 aa11.51□□□□□ -0.57
TRAV4-201ENST00000390426 LRRC32Q14392 662 aa11.51□□□□□ -0.57
TRAV4-201ENST00000390426 PON2Q15165 354 aa11.51□□□□□ -0.57
TRAV4-201ENST00000390426 LPAL2Q16609 132 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms