RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 KATNAL2Q8IYT4 538 aa19.27■□□□□ 0.67
ACTN4-202ENST00000390009 HERPUD2Q9BSE4 406 aa19.27■□□□□ 0.67
ACTN4-202ENST00000390009 CXCL16Q9H2A7 254 aa19.27■□□□□ 0.67
ACTN4-202ENST00000390009 CYTH4Q9UIA0 394 aa19.27■□□□□ 0.67
ACTN4-202ENST00000390009 STRIP2Q9ULQ0 834 aa19.27■□□□□ 0.67
ACTN4-202ENST00000390009 IGHA2P01877 340 aa19.26■□□□□ 0.67
ACTN4-202ENST00000390009 MAIP1Q8WWC4 291 aa19.26■□□□□ 0.67
ACTN4-202ENST00000390009 SNX27Q96L92 541 aa19.26■□□□□ 0.67
ACTN4-202ENST00000390009 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.26■□□□□ 0.67
ACTN4-202ENST00000390009 LCMT1Q9UIC8 334 aa19.26■□□□□ 0.67
ACTN4-202ENST00000390009 SNX24Q9Y343 169 aa19.26■□□□□ 0.67
ACTN4-202ENST00000390009 GOLGA8KD6RF30 607 aa19.25■□□□□ 0.67
ACTN4-202ENST00000390009 GJC1P36383 396 aa19.25■□□□□ 0.67
ACTN4-202ENST00000390009 HSD17B3P37058 310 aa19.25■□□□□ 0.67
ACTN4-202ENST00000390009 KCNJ1P48048 391 aa19.25■□□□□ 0.67
ACTN4-202ENST00000390009 ZNF200P98182 395 aaPredicted RBP19.25■□□□□ 0.67
ACTN4-202ENST00000390009 OGDHQ02218 1023 aa19.25■□□□□ 0.67
ACTN4-202ENST00000390009 CRHR2Q13324 411 aa19.25■□□□□ 0.67
ACTN4-202ENST00000390009 C1orf54Q8WWF1 131 aa19.25■□□□□ 0.67
ACTN4-202ENST00000390009 ZMAT2Q96NC0 199 aaKnown RBP19.25■□□□□ 0.67
ACTN4-202ENST00000390009 FMO2Q99518 471 aa19.25■□□□□ 0.67
ACTN4-202ENST00000390009 ZDHHC18Q9NUE0 388 aa19.25■□□□□ 0.67
ACTN4-202ENST00000390009 BARX2Q9UMQ3 279 aaPredicted RBP19.25■□□□□ 0.67
ACTN4-202ENST00000390009 PTPN22Q9Y2R2 807 aa19.25■□□□□ 0.67
ACTN4-202ENST00000390009 DERAQ9Y315 318 aa19.25■□□□□ 0.67
ACTN4-202ENST00000390009 HES2Q9Y543 173 aa19.25■□□□□ 0.67
ACTN4-202ENST00000390009 KRT14P02533 472 aa19.25■□□□□ 0.67
ACTN4-202ENST00000390009 YARSP54577 528 aaKnown RBP19.25■□□□□ 0.67
ACTN4-202ENST00000390009 INCA1Q0VD86 236 aa19.25■□□□□ 0.67
ACTN4-202ENST00000390009 TMC3Q7Z5M5 1100 aa19.25■□□□□ 0.67
ACTN4-202ENST00000390009 EXD1Q8NHP7 514 aa19.25■□□□□ 0.67
ACTN4-202ENST00000390009 TMEM40Q8WWA1 233 aa19.25■□□□□ 0.67
ACTN4-202ENST00000390009 KATNAL1Q9BW62 490 aa19.25■□□□□ 0.67
ACTN4-202ENST00000390009 PSD3Q9NYI0 1048 aa19.25■□□□□ 0.67
ACTN4-202ENST00000390009 TJP2Q9UDY2 1190 aa19.25■□□□□ 0.67
ACTN4-202ENST00000390009 GOLGA6CA6NDK9 693 aa19.24■□□□□ 0.67
ACTN4-202ENST00000390009 MICAL2O94851 1124 aa19.24■□□□□ 0.67
ACTN4-202ENST00000390009 GOLGA6DP0CG33 693 aa19.24■□□□□ 0.67
ACTN4-202ENST00000390009 RALAP11233 206 aa19.24■□□□□ 0.67
ACTN4-202ENST00000390009 TCF4P15884 667 aa19.24■□□□□ 0.67
ACTN4-202ENST00000390009 MYO1EQ12965 1108 aa19.24■□□□□ 0.67
ACTN4-202ENST00000390009 SNX17Q15036 470 aa19.24■□□□□ 0.67
ACTN4-202ENST00000390009 UAP1Q16222 522 aaPredicted RBP19.24■□□□□ 0.67
ACTN4-202ENST00000390009 FSCN1Q16658 493 aaKnown RBP19.24■□□□□ 0.67
ACTN4-202ENST00000390009 HEXIM2Q96MH2 286 aaKnown RBP19.24■□□□□ 0.67
ACTN4-202ENST00000390009 TRIM6Q9C030 488 aaPredicted RBP19.24■□□□□ 0.67
ACTN4-202ENST00000390009 NXF3Q9H4D5 531 aaKnown RBP19.24■□□□□ 0.67
ACTN4-202ENST00000390009 FAM124BQ9H5Z6 455 aaPredicted RBP19.24■□□□□ 0.67
ACTN4-202ENST00000390009 GOLGA6AQ9NYA3 693 aa19.24■□□□□ 0.67
ACTN4-202ENST00000390009 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.24■□□□□ 0.678e-6■■■□□ 15.8
ACTN4-202ENST00000390009 PLAAQ9Y263 795 aa19.24■□□□□ 0.67
ACTN4-202ENST00000390009 F8VP50 259 aa19.24■□□□□ 0.67
ACTN4-202ENST00000390009 ECEL1O95672 775 aa19.24■□□□□ 0.67
ACTN4-202ENST00000390009 VDRP11473 427 aa19.24■□□□□ 0.67
ACTN4-202ENST00000390009 AXLP30530 894 aa19.24■□□□□ 0.67
ACTN4-202ENST00000390009 RPL21P46778 160 aaKnown RBP19.24■□□□□ 0.67
ACTN4-202ENST00000390009 NDST1P52848 882 aa19.24■□□□□ 0.67
ACTN4-202ENST00000390009 KLF1Q13351 362 aaPredicted RBP19.24■□□□□ 0.67
ACTN4-202ENST00000390009 PIGHQ14442 188 aaPredicted RBP19.24■□□□□ 0.67
ACTN4-202ENST00000390009 ARL8AQ96BM9 186 aa19.24■□□□□ 0.67
ACTN4-202ENST00000390009 CPXM1Q96SM3 734 aa19.24■□□□□ 0.67
ACTN4-202ENST00000390009 HEMGNQ9BXL5 484 aa19.24■□□□□ 0.67
ACTN4-202ENST00000390009 CHST7Q9NS84 486 aa19.24■□□□□ 0.67
ACTN4-202ENST00000390009 GRHL1Q9NZI5 618 aa19.24■□□□□ 0.67
ACTN4-202ENST00000390009 PASKQ96RG2 1323 aa19.23■□□□□ 0.67
ACTN4-202ENST00000390009 C17orf102A2RUQ5 167 aa19.23■□□□□ 0.67
ACTN4-202ENST00000390009 FAM155AB1AL88 458 aaPredicted RBP19.23■□□□□ 0.67
ACTN4-202ENST00000390009 GOLGA8SH3BPF8 625 aa19.23■□□□□ 0.67
ACTN4-202ENST00000390009 CTGFP29279 349 aa19.23■□□□□ 0.67
ACTN4-202ENST00000390009 PLTPP55058 493 aa19.23■□□□□ 0.67
ACTN4-202ENST00000390009 PURAQ00577 322 aaKnown RBP19.23■□□□□ 0.67
ACTN4-202ENST00000390009 DHX9Q08211 1270 aaKnown RBP19.23■□□□□ 0.67
ACTN4-202ENST00000390009 SNX1Q13596 522 aa19.23■□□□□ 0.67
ACTN4-202ENST00000390009 MTMR3Q13615 1198 aa19.23■□□□□ 0.67
ACTN4-202ENST00000390009 ZBTB6Q15916 424 aa19.23■□□□□ 0.67
ACTN4-202ENST00000390009 ZDHHC24Q6UX98 284 aa19.23■□□□□ 0.67
ACTN4-202ENST00000390009 TTC39CQ8N584 583 aa19.23■□□□□ 0.67
ACTN4-202ENST00000390009 ATG4AQ8WYN0 398 aa19.23■□□□□ 0.67
ACTN4-202ENST00000390009 SLCO2A1Q92959 643 aa19.23■□□□□ 0.67
ACTN4-202ENST00000390009 OSBPL8Q9BZF1 889 aa19.23■□□□□ 0.67
ACTN4-202ENST00000390009 TUBGCP4Q9UGJ1 667 aa19.23■□□□□ 0.67
ACTN4-202ENST00000390009 PIN4Q9Y237 131 aaKnown RBP19.23■□□□□ 0.67
ACTN4-202ENST00000390009 SIGLEC16A6NMB1 481 aa19.22■□□□□ 0.67
ACTN4-202ENST00000390009 M0QYV0 167 aa19.22■□□□□ 0.67
ACTN4-202ENST00000390009 RECQL4O94761 1208 aa19.22■□□□□ 0.67
ACTN4-202ENST00000390009 HMGCRP04035 888 aa19.22■□□□□ 0.67
ACTN4-202ENST00000390009 AKR1A1P14550 325 aa19.22■□□□□ 0.67
ACTN4-202ENST00000390009 GBP1P32455 592 aa19.22■□□□□ 0.67
ACTN4-202ENST00000390009 LMAN1P49257 510 aa19.22■□□□□ 0.67
ACTN4-202ENST00000390009 PSMC1P62191 440 aaKnown RBP19.22■□□□□ 0.67
ACTN4-202ENST00000390009 CNGA2Q16280 664 aa19.22■□□□□ 0.67
ACTN4-202ENST00000390009 ATP13A4Q4VNC1 1196 aa19.22■□□□□ 0.67
ACTN4-202ENST00000390009 TTMPQ5BVD1 217 aa19.22■□□□□ 0.67
ACTN4-202ENST00000390009 GLRA4Q5JXX5 417 aa19.22■□□□□ 0.67
ACTN4-202ENST00000390009 NIPA2Q8N8Q9 360 aa19.22■□□□□ 0.67
ACTN4-202ENST00000390009 FBXO25Q8TCJ0 367 aa19.22■□□□□ 0.67
ACTN4-202ENST00000390009 UBLCP1Q8WVY7 318 aaPredicted RBP19.22■□□□□ 0.67
ACTN4-202ENST00000390009 DCLK3Q9C098 648 aa19.22■□□□□ 0.67
ACTN4-202ENST00000390009 SYNCQ9H7C4 482 aa19.22■□□□□ 0.67
ACTN4-202ENST00000390009 KLHL11Q9NVR0 708 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms