RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 SDR16C5Q8N3Y7 309 aa15.77■□□□□ 0.12
VLDLR-202ENST00000382099 LNX1Q8TBB1 728 aaPredicted RBP15.77■□□□□ 0.12
VLDLR-202ENST00000382099 DENND1AQ8TEH3 1009 aa15.77■□□□□ 0.12
VLDLR-202ENST00000382099 TYW1Q9NV66 732 aaKnown RBP15.77■□□□□ 0.12
VLDLR-202ENST00000382099 TMOD3Q9NYL9 352 aa15.77■□□□□ 0.12
VLDLR-202ENST00000382099 TAS2R14Q9NYV8 317 aa15.77■□□□□ 0.12
VLDLR-202ENST00000382099 MARCOQ9UEW3 520 aaPredicted RBP15.77■□□□□ 0.12
VLDLR-202ENST00000382099 PCDHA4Q9UN74 947 aa15.77■□□□□ 0.12
VLDLR-202ENST00000382099 PARP4Q9UKK3 1724 aaKnown RBP15.77■□□□□ 0.11
VLDLR-202ENST00000382099 PEX1O43933 1283 aa15.77■□□□□ 0.11
VLDLR-202ENST00000382099 NMT2O60551 498 aa15.77■□□□□ 0.11
VLDLR-202ENST00000382099 ITIH2P19823 946 aa15.77■□□□□ 0.11
VLDLR-202ENST00000382099 MZF1P28698 734 aaPredicted RBP15.77■□□□□ 0.11
VLDLR-202ENST00000382099 NR1H2P55055 460 aa15.77■□□□□ 0.11
VLDLR-202ENST00000382099 ALX1Q15699 326 aa15.77■□□□□ 0.11
VLDLR-202ENST00000382099 TMCO4Q5TGY1 634 aa15.77■□□□□ 0.11
VLDLR-202ENST00000382099 EGFLAMQ63HQ2 1017 aa15.77■□□□□ 0.11
VLDLR-202ENST00000382099 SNRNP48Q6IEG0 339 aaKnown RBP15.77■□□□□ 0.11
VLDLR-202ENST00000382099 SEPT12Q8IYM1 358 aa15.77■□□□□ 0.11
VLDLR-202ENST00000382099 DDI1Q8WTU0 396 aa15.77■□□□□ 0.11
VLDLR-202ENST00000382099 LDHCP07864 332 aa15.76■□□□□ 0.11
VLDLR-202ENST00000382099 NR2F2P24468 414 aa15.76■□□□□ 0.11
VLDLR-202ENST00000382099 HOXD13P35453 343 aa15.76■□□□□ 0.11
VLDLR-202ENST00000382099 SEC23AQ15436 765 aa15.76■□□□□ 0.11
VLDLR-202ENST00000382099 DGKHQ86XP1 1220 aa15.76■□□□□ 0.11
VLDLR-202ENST00000382099 SLC13A5Q86YT5 568 aaPredicted RBP15.76■□□□□ 0.11
VLDLR-202ENST00000382099 PROM2Q8N271 834 aa15.76■□□□□ 0.11
VLDLR-202ENST00000382099 SAMD3Q8N6K7 520 aa15.76■□□□□ 0.11
VLDLR-202ENST00000382099 PALMDQ9NP74 551 aa15.76■□□□□ 0.11
VLDLR-202ENST00000382099 ZDHHC7Q9NXF8 308 aa15.76■□□□□ 0.11
VLDLR-202ENST00000382099 AJAP1Q9UKB5 411 aaPredicted RBP15.76■□□□□ 0.11
VLDLR-202ENST00000382099 ZNF142P52746 1687 aaPredicted RBP15.76■□□□□ 0.11
VLDLR-202ENST00000382099 UNCXA6NJT0 531 aa15.76■□□□□ 0.11
VLDLR-202ENST00000382099 ENDOUP21128 410 aaKnown RBP15.76■□□□□ 0.11
VLDLR-202ENST00000382099 COMTP21964 271 aa15.76■□□□□ 0.11
VLDLR-202ENST00000382099 CTNNA2P26232 953 aa15.76■□□□□ 0.11
VLDLR-202ENST00000382099 SPIDRQ14159 915 aa15.76■□□□□ 0.11
VLDLR-202ENST00000382099 ARHGAP44Q17R89 818 aa15.76■□□□□ 0.11
VLDLR-202ENST00000382099 DNAL1Q4LDG9 190 aa15.76■□□□□ 0.11
VLDLR-202ENST00000382099 SYCP2LQ5T4T6 812 aa15.76■□□□□ 0.11
VLDLR-202ENST00000382099 SLC51AQ86UW1 340 aa15.76■□□□□ 0.11
VLDLR-202ENST00000382099 KLHL25Q9H0H3 589 aa15.76■□□□□ 0.11
VLDLR-202ENST00000382099 PARVBQ9HBI1 364 aa15.76■□□□□ 0.11
VLDLR-202ENST00000382099 ACP6Q9NPH0 428 aa15.76■□□□□ 0.11
VLDLR-202ENST00000382099 WHRNQ9P202 907 aa15.76■□□□□ 0.11
VLDLR-202ENST00000382099 ITM2AO43736 263 aa15.75■□□□□ 0.11
VLDLR-202ENST00000382099 SORBS2O94875 1100 aaKnown RBP15.75■□□□□ 0.11
VLDLR-202ENST00000382099 KRT18P05783 430 aaKnown RBP15.75■□□□□ 0.11
VLDLR-202ENST00000382099 PON1P27169 355 aa15.75■□□□□ 0.11
VLDLR-202ENST00000382099 MRPS9P82933 396 aaKnown RBP15.75■□□□□ 0.11
VLDLR-202ENST00000382099 TROAPQ12815 778 aa15.75■□□□□ 0.11
VLDLR-202ENST00000382099 PFKFB3Q16875 520 aaPredicted RBP15.75■□□□□ 0.11
VLDLR-202ENST00000382099 HERC4Q5GLZ8 1057 aaPredicted RBP15.75■□□□□ 0.11
VLDLR-202ENST00000382099 TCHHL1Q5QJ38 904 aaPredicted RBP15.75■□□□□ 0.11
VLDLR-202ENST00000382099 DCDC5Q6ZRR9 648 aa15.75■□□□□ 0.11
VLDLR-202ENST00000382099 ZNF398Q8TD17 642 aa15.75■□□□□ 0.11
VLDLR-202ENST00000382099 NRDE2Q9H7Z3 1164 aa15.75■□□□□ 0.11
VLDLR-202ENST00000382099 GPAMQ9HCL2 828 aa15.75■□□□□ 0.11
VLDLR-202ENST00000382099 CYLDQ9NQC7 956 aa15.75■□□□□ 0.11
VLDLR-202ENST00000382099 GCNT4Q9P109 453 aa15.75■□□□□ 0.11
VLDLR-202ENST00000382099 COG5Q9UP83 839 aa15.75■□□□□ 0.11
VLDLR-202ENST00000382099 CEPT1Q9Y6K0 416 aa15.75■□□□□ 0.11
VLDLR-202ENST00000382099 PVALEFA0A1B0GWK0 134 aa15.75■□□□□ 0.11
VLDLR-202ENST00000382099 GNPATO15228 680 aa15.75■□□□□ 0.11
VLDLR-202ENST00000382099 CSF1RP07333 972 aa15.75■□□□□ 0.11
VLDLR-202ENST00000382099 TMEM253P0C7T8 217 aa15.75■□□□□ 0.11
VLDLR-202ENST00000382099 NUP107P57740 925 aa15.75■□□□□ 0.11
VLDLR-202ENST00000382099 PPATQ06203 517 aa15.75■□□□□ 0.11
VLDLR-202ENST00000382099 KRT72Q14CN4 511 aa15.75■□□□□ 0.11
VLDLR-202ENST00000382099 PSMD6Q15008 389 aa15.75■□□□□ 0.11
VLDLR-202ENST00000382099 CPNE8Q86YQ8 564 aa15.75■□□□□ 0.11
VLDLR-202ENST00000382099 PPM1KQ8N3J5 372 aa15.75■□□□□ 0.11
VLDLR-202ENST00000382099 ANKRD36BP1Q96IX9 119 aa15.75■□□□□ 0.11
VLDLR-202ENST00000382099 BTBD6Q96KE9 485 aa15.75■□□□□ 0.11
VLDLR-202ENST00000382099 ZSWIM1Q9BR11 485 aa15.75■□□□□ 0.11
VLDLR-202ENST00000382099 FGFBP2Q9BYJ0 223 aa15.75■□□□□ 0.11
VLDLR-202ENST00000382099 EHD1Q9H4M9 534 aa15.75■□□□□ 0.11
VLDLR-202ENST00000382099 DNAJB4Q9UDY4 337 aa15.75■□□□□ 0.11
VLDLR-202ENST00000382099 NIP7Q9Y221 180 aaKnown RBP eCLIP15.75■□□□□ 0.11
VLDLR-202ENST00000382099 AP4B1Q9Y6B7 739 aa15.75■□□□□ 0.11
VLDLR-202ENST00000382099 NOTOA8MTQ0 251 aa15.75■□□□□ 0.11
VLDLR-202ENST00000382099 MARCH6O60337 910 aa15.75■□□□□ 0.11
VLDLR-202ENST00000382099 FAM58BPP0C7Q3 252 aa15.75■□□□□ 0.11
VLDLR-202ENST00000382099 POLR2MP0CAP2 368 aa15.75■□□□□ 0.11
VLDLR-202ENST00000382099 CALM1P0DP23 149 aa15.75■□□□□ 0.11
VLDLR-202ENST00000382099 CALM2P0DP24 149 aa15.75■□□□□ 0.11
VLDLR-202ENST00000382099 CALM3P0DP25 149 aa15.75■□□□□ 0.11
VLDLR-202ENST00000382099 MAGEA4P43358 317 aa15.75■□□□□ 0.11
VLDLR-202ENST00000382099 PHKA2P46019 1235 aa15.75■□□□□ 0.11
VLDLR-202ENST00000382099 IRX4P78413 519 aa15.75■□□□□ 0.11
VLDLR-202ENST00000382099 NSUN2Q08J23 767 aaKnown RBP eCLIP15.75■□□□□ 0.11
VLDLR-202ENST00000382099 LRP8Q14114 963 aa15.75■□□□□ 0.11
VLDLR-202ENST00000382099 FAM182BQ5T319 152 aa15.75■□□□□ 0.11
VLDLR-202ENST00000382099 RNF111Q6ZNA4 994 aa15.75■□□□□ 0.11
VLDLR-202ENST00000382099 VASH1Q7L8A9 365 aaPredicted RBP15.75■□□□□ 0.11
VLDLR-202ENST00000382099 GSTA5Q7RTV2 222 aa15.75■□□□□ 0.11
VLDLR-202ENST00000382099 SKA1Q96BD8 255 aa15.75■□□□□ 0.11
VLDLR-202ENST00000382099 MAELQ96JY0 434 aaKnown RBP15.75■□□□□ 0.11
VLDLR-202ENST00000382099 DNAJC18Q9H819 358 aa15.75■□□□□ 0.11
VLDLR-202ENST00000382099 SACM1LQ9NTJ5 587 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms