RNA–Protein interactions for RNA: ENST00000381323.7

FAM49A-201, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49A, Length 4,670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-201ENST00000381323 BRSK2Q8IWQ3 736 aa8.4□□□□□ -1.06
FAM49A-201ENST00000381323 TNIP3Q96KP6 325 aa8.4□□□□□ -1.06
FAM49A-201ENST00000381323 LMAN1LQ9HAT1 526 aa8.4□□□□□ -1.06
FAM49A-201ENST00000381323 HSPBP1Q9NZL4 362 aa8.4□□□□□ -1.06
FAM49A-201ENST00000381323 FBXO2Q9UK22 296 aaPredicted RBP8.4□□□□□ -1.06
FAM49A-201ENST00000381323 SH3BP1Q9Y3L3 701 aa8.4□□□□□ -1.06
FAM49A-201ENST00000381323 R4GN57 208 aa8.4□□□□□ -1.06
FAM49A-201ENST00000381323 MAP3K13O43283 966 aa8.4□□□□□ -1.06
FAM49A-201ENST00000381323 VIPR2P41587 438 aa8.4□□□□□ -1.06
FAM49A-201ENST00000381323 DNM1Q05193 864 aaKnown RBP8.4□□□□□ -1.06
FAM49A-201ENST00000381323 GRIN1Q05586 938 aa8.4□□□□□ -1.06
FAM49A-201ENST00000381323 IER5LQ5T953 404 aa8.4□□□□□ -1.06
FAM49A-201ENST00000381323 HS6ST3Q8IZP7 471 aa8.4□□□□□ -1.06
FAM49A-201ENST00000381323 ANKRD20A12PQ8NF67 263 aa8.4□□□□□ -1.06
FAM49A-201ENST00000381323 BPIFB1Q8TDL5 484 aa8.4□□□□□ -1.06
FAM49A-201ENST00000381323 C2orf15Q8WU43 125 aaKnown RBP8.4□□□□□ -1.06
FAM49A-201ENST00000381323 SYT15Q9BQS2 421 aa8.4□□□□□ -1.06
FAM49A-201ENST00000381323 SEMA4AQ9H3S1 761 aa8.4□□□□□ -1.06
FAM49A-201ENST00000381323 SMOC2Q9H3U7 446 aa8.4□□□□□ -1.06
FAM49A-201ENST00000381323 C8orf33Q9H7E9 229 aaPredicted RBP8.4□□□□□ -1.06
FAM49A-201ENST00000381323 BLOC1S4Q9NUP1 217 aa8.4□□□□□ -1.06
FAM49A-201ENST00000381323 BCCIPQ9P287 314 aaKnown RBP eCLIP8.4□□□□□ -1.06
FAM49A-201ENST00000381323 GNL1P36915 607 aaPredicted RBP8.4□□□□□ -1.07
FAM49A-201ENST00000381323 PIK3CAP42336 1068 aa8.4□□□□□ -1.07
FAM49A-201ENST00000381323 MAGEA9P43362 315 aa8.4□□□□□ -1.07
FAM49A-201ENST00000381323 LILRA6Q6PI73 481 aa8.4□□□□□ -1.07
FAM49A-201ENST00000381323 RSRC2Q7L4I2 434 aaKnown RBP8.4□□□□□ -1.07
FAM49A-201ENST00000381323 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.4□□□□□ -1.07
FAM49A-201ENST00000381323 ARID3BQ8IVW6 561 aaPredicted RBP8.4□□□□□ -1.07
FAM49A-201ENST00000381323 C12orf50Q8NA57 414 aaPredicted RBP8.4□□□□□ -1.07
FAM49A-201ENST00000381323 LINC00301Q8NCQ3 95 aa8.4□□□□□ -1.07
FAM49A-201ENST00000381323 ZNF707Q96C28 371 aaPredicted RBP8.4□□□□□ -1.07
FAM49A-201ENST00000381323 RMND1Q9NWS8 449 aa8.4□□□□□ -1.07
FAM49A-201ENST00000381323 ATG13O75143 517 aa8.39□□□□□ -1.07
FAM49A-201ENST00000381323 CCNE1P24864 410 aa8.39□□□□□ -1.07
FAM49A-201ENST00000381323 HTR4Q13639 388 aa8.39□□□□□ -1.07
FAM49A-201ENST00000381323 CPA6Q8N4T0 437 aa8.39□□□□□ -1.07
FAM49A-201ENST00000381323 FGF14Q92915 247 aa8.39□□□□□ -1.07
FAM49A-201ENST00000381323 TASP1Q9H6P5 420 aa8.39□□□□□ -1.07
FAM49A-201ENST00000381323 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.39□□□□□ -1.07
FAM49A-201ENST00000381323 USP25Q9UHP3 1055 aa8.39□□□□□ -1.07
FAM49A-201ENST00000381323 GTF3C4Q9UKN8 822 aa8.39□□□□□ -1.07
FAM49A-201ENST00000381323 SOAT2O75908 522 aa8.39□□□□□ -1.07
FAM49A-201ENST00000381323 LRPAP1P30533 357 aa8.39□□□□□ -1.07
FAM49A-201ENST00000381323 CYP4F8P98187 520 aa8.39□□□□□ -1.07
FAM49A-201ENST00000381323 TSR1Q2NL82 804 aaKnown RBP8.39□□□□□ -1.07
FAM49A-201ENST00000381323 LRSAM1Q6UWE0 723 aa8.39□□□□□ -1.07
FAM49A-201ENST00000381323 UNC13DQ70J99 1090 aa8.39□□□□□ -1.07
FAM49A-201ENST00000381323 C1orf210Q8IVY1 113 aa8.39□□□□□ -1.07
FAM49A-201ENST00000381323 ADSSL1Q8N142 457 aa8.39□□□□□ -1.07
FAM49A-201ENST00000381323 CBWD1Q9BRT8 395 aa8.39□□□□□ -1.07
FAM49A-201ENST00000381323 CPSF3Q9UKF6 684 aaKnown RBP8.39□□□□□ -1.07
FAM49A-201ENST00000381323 MYO10Q9HD67 2058 aa8.39□□□□□ -1.07
FAM49A-201ENST00000381323 LILRB3O75022 631 aa8.39□□□□□ -1.07
FAM49A-201ENST00000381323 EPB41P11171 864 aaKnown RBP8.39□□□□□ -1.07
FAM49A-201ENST00000381323 HDCP19113 662 aa8.39□□□□□ -1.07
FAM49A-201ENST00000381323 CXCL12P48061 93 aa8.39□□□□□ -1.07
FAM49A-201ENST00000381323 LPAL2Q16609 132 aa8.39□□□□□ -1.07
FAM49A-201ENST00000381323 ARSHQ5FYA8 562 aa8.39□□□□□ -1.07
FAM49A-201ENST00000381323 TANGO2Q6ICL3 276 aa8.39□□□□□ -1.07
FAM49A-201ENST00000381323 CELF5Q8N6W0 485 aaKnown RBP8.39□□□□□ -1.07
FAM49A-201ENST00000381323 C3orf58Q8NDZ4 430 aa8.39□□□□□ -1.07
FAM49A-201ENST00000381323 C11orf16Q9NQ32 467 aa8.39□□□□□ -1.07
FAM49A-201ENST00000381323 A0A1B0GVL5 298 aa8.39□□□□□ -1.07
FAM49A-201ENST00000381323 MTMR11A4FU01 709 aa8.39□□□□□ -1.07
FAM49A-201ENST00000381323 TISP43B9A030 160 aa8.39□□□□□ -1.07
FAM49A-201ENST00000381323 ECI2O75521 394 aa8.39□□□□□ -1.07
FAM49A-201ENST00000381323 MBL2P11226 248 aaPredicted RBP8.39□□□□□ -1.07
FAM49A-201ENST00000381323 AP3M2P53677 418 aa8.39□□□□□ -1.07
FAM49A-201ENST00000381323 SNRNP35Q16560 246 aaKnown RBP8.39□□□□□ -1.07
FAM49A-201ENST00000381323 CCDC40Q4G0X9 1142 aa8.39□□□□□ -1.07
FAM49A-201ENST00000381323 SDE2Q6IQ49 451 aa8.39□□□□□ -1.07
FAM49A-201ENST00000381323 PDCL3Q9H2J4 239 aa8.39□□□□□ -1.07
FAM49A-201ENST00000381323 OLFML3Q9NRN5 406 aa8.39□□□□□ -1.07
FAM49A-201ENST00000381323 SERTAD1Q9UHV2 236 aa8.39□□□□□ -1.07
FAM49A-201ENST00000381323 LSM7Q9UK45 103 aaKnown RBP8.39□□□□□ -1.07
FAM49A-201ENST00000381323 SZT2Q5T011 3432 aa8.39□□□□□ -1.07
FAM49A-201ENST00000381323 USP17L7P0C7H9 530 aa8.38□□□□□ -1.07
FAM49A-201ENST00000381323 CCR3P51677 355 aa8.38□□□□□ -1.07
FAM49A-201ENST00000381323 PSMC1P62191 440 aaKnown RBP8.38□□□□□ -1.07
FAM49A-201ENST00000381323 ITPRIPL2Q3MIP1 535 aa8.38□□□□□ -1.07
FAM49A-201ENST00000381323 TMEM105Q8N8V8 129 aa8.38□□□□□ -1.07
FAM49A-201ENST00000381323 TCEAL4Q96EI5 215 aa8.38□□□□□ -1.07
FAM49A-201ENST00000381323 PTPRHQ9HD43 1115 aa8.38□□□□□ -1.07
FAM49A-201ENST00000381323 CGNQ9P2M7 1197 aaKnown RBP8.38□□□□□ -1.07
FAM49A-201ENST00000381323 BECN2A8MW95 431 aa8.38□□□□□ -1.07
FAM49A-201ENST00000381323 SLC9A3R1O14745 358 aaPredicted RBP8.38□□□□□ -1.07
FAM49A-201ENST00000381323 CETN3O15182 167 aa8.38□□□□□ -1.07
FAM49A-201ENST00000381323 CD19P15391 556 aa8.38□□□□□ -1.07
FAM49A-201ENST00000381323 DDR2Q16832 855 aa8.38□□□□□ -1.07
FAM49A-201ENST00000381323 FAM78AQ5JUQ0 283 aa8.38□□□□□ -1.07
FAM49A-201ENST00000381323 LRRC52Q8N7C0 313 aa8.38□□□□□ -1.07
FAM49A-201ENST00000381323 GOLGA1Q92805 767 aa8.38□□□□□ -1.07
FAM49A-201ENST00000381323 DNASE1L2Q92874 299 aa8.38□□□□□ -1.07
FAM49A-201ENST00000381323 ZFHX2Q9C0A1 2572 aaPredicted RBP8.38□□□□□ -1.07
FAM49A-201ENST00000381323 STX10O60499 249 aa8.38□□□□□ -1.07
FAM49A-201ENST00000381323 OAZ2O95190 189 aa8.38□□□□□ -1.07
FAM49A-201ENST00000381323 DCAF17Q5H9S7 520 aaPredicted RBP8.38□□□□□ -1.07
FAM49A-201ENST00000381323 SDHAF4Q5VUM1 108 aa8.38□□□□□ -1.07
FAM49A-201ENST00000381323 IL31Q6EBC2 164 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms