RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 CRISPLD1Q9H336 500 aa14□□□□□ -0.17
RPAIN-202ENST00000381208 ATXN3LQ9H3M9 355 aa14□□□□□ -0.17
RPAIN-202ENST00000381208 C8orf33Q9H7E9 229 aaPredicted RBP14□□□□□ -0.17
RPAIN-202ENST00000381208 RBAKQ9NYW8 714 aaPredicted RBP14□□□□□ -0.17
RPAIN-202ENST00000381208 ITGA11Q9UKX5 1188 aa14□□□□□ -0.17
RPAIN-202ENST00000381208 SLC27A5Q9Y2P5 690 aa14□□□□□ -0.17
RPAIN-202ENST00000381208 DMDP11532 3685 aa14□□□□□ -0.17
RPAIN-202ENST00000381208 SOBPA7XYQ1 873 aa13.99□□□□□ -0.17
RPAIN-202ENST00000381208 SPTLC2O15270 562 aa13.99□□□□□ -0.17
RPAIN-202ENST00000381208 YEATS4O95619 227 aa13.99□□□□□ -0.17
RPAIN-202ENST00000381208 TFAMQ00059 246 aaKnown RBP13.99□□□□□ -0.17
RPAIN-202ENST00000381208 FCHO2Q0JRZ9 810 aa13.99□□□□□ -0.17
RPAIN-202ENST00000381208 SLC39A12Q504Y0 691 aa13.99□□□□□ -0.17
RPAIN-202ENST00000381208 ARHGAP29Q52LW3 1261 aa13.99□□□□□ -0.17
RPAIN-202ENST00000381208 WSCD1Q658N2 575 aa13.99□□□□□ -0.17
RPAIN-202ENST00000381208 EFCAB13Q8IY85 973 aa13.99□□□□□ -0.17
RPAIN-202ENST00000381208 CSGALNACT1Q8TDX6 532 aa13.99□□□□□ -0.17
RPAIN-202ENST00000381208 SNX21Q969T3 373 aa13.99□□□□□ -0.17
RPAIN-202ENST00000381208 ZSWIM3Q96MP5 696 aa13.99□□□□□ -0.17
RPAIN-202ENST00000381208 SEPT5Q99719 369 aaPredicted RBP13.99□□□□□ -0.17
RPAIN-202ENST00000381208 MAGEF1Q9HAY2 307 aa13.99□□□□□ -0.17
RPAIN-202ENST00000381208 KIAA1586Q9HCI6 787 aa13.99□□□□□ -0.17
RPAIN-202ENST00000381208 TBC1D7Q9P0N9 293 aa13.99□□□□□ -0.17
RPAIN-202ENST00000381208 MTF2Q9Y483 593 aaPredicted RBP13.99□□□□□ -0.17
RPAIN-202ENST00000381208 R4GN57 208 aa13.99□□□□□ -0.17
RPAIN-202ENST00000381208 CFAP54Q96N23 3096 aa13.99□□□□□ -0.17
RPAIN-202ENST00000381208 HUS1O60921 280 aa13.98□□□□□ -0.17
RPAIN-202ENST00000381208 LRRN2O75325 713 aa13.98□□□□□ -0.17
RPAIN-202ENST00000381208 GJA1P17302 382 aa13.98□□□□□ -0.17
RPAIN-202ENST00000381208 CD72P21854 359 aa13.98□□□□□ -0.17
RPAIN-202ENST00000381208 DDX6P26196 483 aaKnown RBP eCLIP13.98□□□□□ -0.17
RPAIN-202ENST00000381208 GABRR2P28476 465 aa13.98□□□□□ -0.17
RPAIN-202ENST00000381208 VIPR2P41587 438 aa13.98□□□□□ -0.17
RPAIN-202ENST00000381208 NRLP54845 237 aa13.98□□□□□ -0.17
RPAIN-202ENST00000381208 RBP5P82980 135 aa13.98□□□□□ -0.17
RPAIN-202ENST00000381208 MYL7Q01449 175 aa13.98□□□□□ -0.17
RPAIN-202ENST00000381208 KCNA1Q09470 495 aa13.98□□□□□ -0.17
RPAIN-202ENST00000381208 GAREM2Q75VX8 874 aa13.98□□□□□ -0.17
RPAIN-202ENST00000381208 ARID3BQ8IVW6 561 aaPredicted RBP13.98□□□□□ -0.17
RPAIN-202ENST00000381208 MAML2Q8IZL2 1156 aaPredicted RBP13.98□□□□□ -0.17
RPAIN-202ENST00000381208 GPD1LQ8N335 351 aa13.98□□□□□ -0.17
RPAIN-202ENST00000381208 TMEM130Q8N3G9 435 aa13.98□□□□□ -0.17
RPAIN-202ENST00000381208 IQUBQ8NA54 791 aa13.98□□□□□ -0.17
RPAIN-202ENST00000381208 LEO1Q8WVC0 666 aaPredicted RBP13.98□□□□□ -0.17
RPAIN-202ENST00000381208 ATRIPQ8WXE1 791 aa13.98□□□□□ -0.17
RPAIN-202ENST00000381208 FAM3CQ92520 227 aa13.98□□□□□ -0.17
RPAIN-202ENST00000381208 ANKRD36BP1Q96IX9 119 aa13.98□□□□□ -0.17
RPAIN-202ENST00000381208 TMEM209Q96SK2 561 aa13.98□□□□□ -0.17
RPAIN-202ENST00000381208 ACBD6Q9BR61 282 aa13.98□□□□□ -0.17
RPAIN-202ENST00000381208 PANK2Q9BZ23 570 aa13.98□□□□□ -0.17
RPAIN-202ENST00000381208 CHRDQ9H2X0 955 aa13.98□□□□□ -0.17
RPAIN-202ENST00000381208 TASP1Q9H6P5 420 aa13.98□□□□□ -0.17
RPAIN-202ENST00000381208 KBTBD4Q9NVX7 518 aa13.98□□□□□ -0.17
RPAIN-202ENST00000381208 ZSCAN32Q9NX65 697 aa13.98□□□□□ -0.17
RPAIN-202ENST00000381208 GDAP2Q9NXN4 497 aa13.98□□□□□ -0.17
RPAIN-202ENST00000381208 PCDHB5Q9Y5E4 795 aa13.98□□□□□ -0.17
RPAIN-202ENST00000381208 PIAS3Q9Y6X2 628 aa13.98□□□□□ -0.17
RPAIN-202ENST00000381208 VPS13AQ96RL7 3174 aa13.98□□□□□ -0.17
RPAIN-202ENST00000381208 MIA3Q5JRA6 1907 aa13.98□□□□□ -0.17
RPAIN-202ENST00000381208 SPTBN4Q9H254 2564 aa13.98□□□□□ -0.17
RPAIN-202ENST00000381208 ZNF233A6NK53 670 aa13.97□□□□□ -0.17
RPAIN-202ENST00000381208 EIF3DO15371 548 aaKnown RBP eCLIP13.97□□□□□ -0.17
RPAIN-202ENST00000381208 CUTAO60888 179 aa13.97□□□□□ -0.17
RPAIN-202ENST00000381208 TMEM191BP0C7N4 346 aa13.97□□□□□ -0.17
RPAIN-202ENST00000381208 HAPLN1P10915 354 aaPredicted RBP13.97□□□□□ -0.17
RPAIN-202ENST00000381208 POLR2BP30876 1174 aaKnown RBP13.97□□□□□ -0.17
RPAIN-202ENST00000381208 SNRPFP62306 86 aaKnown RBP13.97□□□□□ -0.17
RPAIN-202ENST00000381208 CSTF1Q05048 431 aaKnown RBP13.97□□□□□ -0.17
RPAIN-202ENST00000381208 MYO1EQ12965 1108 aa13.97□□□□□ -0.17
RPAIN-202ENST00000381208 LRRC32Q14392 662 aa13.97□□□□□ -0.17
RPAIN-202ENST00000381208 GPR158Q5T848 1215 aa13.97□□□□□ -0.17
RPAIN-202ENST00000381208 ATL3Q6DD88 541 aa13.97□□□□□ -0.17
RPAIN-202ENST00000381208 CNNM4Q6P4Q7 775 aa13.97□□□□□ -0.17
RPAIN-202ENST00000381208 DPH6Q7L8W6 267 aa13.97□□□□□ -0.17
RPAIN-202ENST00000381208 PDILTQ8N807 584 aa13.97□□□□□ -0.17
RPAIN-202ENST00000381208 C1orf127Q8N9H9 656 aa13.97□□□□□ -0.17
RPAIN-202ENST00000381208 RUBCNQ92622 972 aa13.97□□□□□ -0.17
RPAIN-202ENST00000381208 SAAL1Q96ER3 474 aa13.97□□□□□ -0.17
RPAIN-202ENST00000381208 CBWD1Q9BRT8 395 aa13.97□□□□□ -0.17
RPAIN-202ENST00000381208 ABCB6Q9NP58 842 aa13.97□□□□□ -0.17
RPAIN-202ENST00000381208 PRMT8Q9NR22 394 aaPredicted RBP13.97□□□□□ -0.17
RPAIN-202ENST00000381208 THG1LQ9NWX6 298 aaKnown RBP13.97□□□□□ -0.17
RPAIN-202ENST00000381208 AGAP1Q9UPQ3 857 aa13.97□□□□□ -0.17
RPAIN-202ENST00000381208 OTOGLQ3ZCN5 2332 aa13.97□□□□□ -0.17
RPAIN-202ENST00000381208 SCN1AP35498 2009 aa13.97□□□□□ -0.17
RPAIN-202ENST00000381208 ARNTLO00327 626 aa13.96□□□□□ -0.17
RPAIN-202ENST00000381208 ITGB3P05106 788 aa13.96□□□□□ -0.17
RPAIN-202ENST00000381208 CSH1P0DML2 217 aa13.96□□□□□ -0.17
RPAIN-202ENST00000381208 CSH2P0DML3 217 aa13.96□□□□□ -0.17
RPAIN-202ENST00000381208 PCSK1P29120 753 aa13.96□□□□□ -0.17
RPAIN-202ENST00000381208 LHX1P48742 406 aa13.96□□□□□ -0.17
RPAIN-202ENST00000381208 CCR3P51677 355 aa13.96□□□□□ -0.17
RPAIN-202ENST00000381208 CASP5P51878 434 aa13.96□□□□□ -0.17
RPAIN-202ENST00000381208 RPL10AP62906 217 aaKnown RBP13.96□□□□□ -0.17
RPAIN-202ENST00000381208 PDAP1Q13442 181 aaKnown RBP13.96□□□□□ -0.17
RPAIN-202ENST00000381208 FZD5Q13467 585 aa13.96□□□□□ -0.17
RPAIN-202ENST00000381208 RALGPS2Q86X27 583 aaPredicted RBP13.96□□□□□ -0.17
RPAIN-202ENST00000381208 HSCBQ8IWL3 235 aa13.96□□□□□ -0.17
RPAIN-202ENST00000381208 CSGALNACT2Q8N6G5 542 aa13.96□□□□□ -0.17
RPAIN-202ENST00000381208 TOP6BLQ8N6T0 577 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms