RNA–Protein interactions for RNA: ENST00000381077.9

PUDP-201, Transcript of pseudouridine 5'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUDP, Length 2,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-201ENST00000381077 CCDC142Q17RM4 750 aa13.36□□□□□ -0.27
PUDP-201ENST00000381077 ZNF484Q5JVG2 852 aa13.36□□□□□ -0.27
PUDP-201ENST00000381077 CCDC13Q8IYE1 715 aa13.36□□□□□ -0.27
PUDP-201ENST00000381077 ANKRD13AQ8IZ07 590 aa13.36□□□□□ -0.27
PUDP-201ENST00000381077 GRAMD1AQ96CP6 724 aa13.36□□□□□ -0.27
PUDP-201ENST00000381077 MCEEQ96PE7 176 aa13.36□□□□□ -0.27
PUDP-201ENST00000381077 DDX23Q9BUQ8 820 aaKnown RBP13.36□□□□□ -0.27
PUDP-201ENST00000381077 HEMGNQ9BXL5 484 aa13.36□□□□□ -0.27
PUDP-201ENST00000381077 OSBPL7Q9BZF2 842 aa13.36□□□□□ -0.27
PUDP-201ENST00000381077 RPF1Q9H9Y2 349 aaKnown RBP13.36□□□□□ -0.27
PUDP-201ENST00000381077 USTQ9Y2C2 406 aa13.36□□□□□ -0.27
PUDP-201ENST00000381077 COL1A2P08123 1366 aa13.35□□□□□ -0.27
PUDP-201ENST00000381077 ASB14A6NK59 587 aa13.35□□□□□ -0.27
PUDP-201ENST00000381077 CCT8L1PA6NM43 557 aa13.35□□□□□ -0.27
PUDP-201ENST00000381077 O00370 1275 aa13.35□□□□□ -0.27
PUDP-201ENST00000381077 SOCS7O14512 581 aa13.35□□□□□ -0.27
PUDP-201ENST00000381077 MAGEB2O15479 319 aa13.35□□□□□ -0.27
PUDP-201ENST00000381077 DNAJC8O75937 253 aaPredicted RBP13.35□□□□□ -0.27
PUDP-201ENST00000381077 MCF2P10911 925 aa13.35□□□□□ -0.27
PUDP-201ENST00000381077 HARSP12081 509 aaKnown RBP13.35□□□□□ -0.27
PUDP-201ENST00000381077 CD58P19256 250 aa13.35□□□□□ -0.27
PUDP-201ENST00000381077 CDKN2BP42772 138 aa13.35□□□□□ -0.27
PUDP-201ENST00000381077 SSR1P43307 286 aaKnown RBP13.35□□□□□ -0.27
PUDP-201ENST00000381077 LACTBP83111 547 aaPredicted RBP13.35□□□□□ -0.27
PUDP-201ENST00000381077 CBLBQ13191 982 aa13.35□□□□□ -0.27
PUDP-201ENST00000381077 KCTD2Q14681 263 aa13.35□□□□□ -0.27
PUDP-201ENST00000381077 KYNUQ16719 465 aa13.35□□□□□ -0.27
PUDP-201ENST00000381077 LONRF1Q17RB8 773 aa13.35□□□□□ -0.27
PUDP-201ENST00000381077 LY6KQ17RY6 165 aa13.35□□□□□ -0.27
PUDP-201ENST00000381077 ZNF667Q5HYK9 610 aa13.35□□□□□ -0.27
PUDP-201ENST00000381077 LLGL2Q6P1M3 1020 aa13.35□□□□□ -0.27
PUDP-201ENST00000381077 MFSD7Q6UXD7 560 aa13.35□□□□□ -0.27
PUDP-201ENST00000381077 FASTKD5Q7L8L6 764 aaKnown RBP13.35□□□□□ -0.27
PUDP-201ENST00000381077 SULF1Q8IWU6 871 aa13.35□□□□□ -0.27
PUDP-201ENST00000381077 DHX37Q8IY37 1157 aaKnown RBP13.35□□□□□ -0.27
PUDP-201ENST00000381077 SLC35B2Q8TB61 432 aa13.35□□□□□ -0.27
PUDP-201ENST00000381077 DCPSQ96C86 337 aaKnown RBP13.35□□□□□ -0.27
PUDP-201ENST00000381077 RBM15Q96T37 977 aaKnown RBP eCLIP13.35□□□□□ -0.27
PUDP-201ENST00000381077 PRMT1Q99873 361 aaKnown RBP13.35□□□□□ -0.27
PUDP-201ENST00000381077 ASCC2Q9H1I8 757 aaPredicted RBP13.35□□□□□ -0.27
PUDP-201ENST00000381077 FZD1Q9UP38 647 aa13.35□□□□□ -0.27
PUDP-201ENST00000381077 IVNS1ABPQ9Y6Y0 642 aa13.35□□□□□ -0.27
PUDP-201ENST00000381077 TMEM120BA0PK00 339 aa13.34□□□□□ -0.27
PUDP-201ENST00000381077 SMIM23A6NLE4 172 aa13.34□□□□□ -0.27
PUDP-201ENST00000381077 OSBPP22059 807 aa13.34□□□□□ -0.27
PUDP-201ENST00000381077 BRD2P25440 801 aaKnown RBP13.34□□□□□ -0.27
PUDP-201ENST00000381077 MAGEA4P43358 317 aa13.34□□□□□ -0.27
PUDP-201ENST00000381077 PHKA2P46019 1235 aa13.34□□□□□ -0.27
PUDP-201ENST00000381077 SLCO1A2P46721 670 aa13.34□□□□□ -0.27
PUDP-201ENST00000381077 GABRB2P47870 512 aa13.34□□□□□ -0.27
PUDP-201ENST00000381077 PPIL2Q13356 520 aa13.34□□□□□ -0.27
PUDP-201ENST00000381077 TTLL4Q14679 1199 aa13.34□□□□□ -0.27
PUDP-201ENST00000381077 ZC3H12AQ5D1E8 599 aaKnown RBP13.34□□□□□ -0.27
PUDP-201ENST00000381077 VSTM1Q6UX27 236 aa13.34□□□□□ -0.27
PUDP-201ENST00000381077 GADL1Q6ZQY3 521 aa13.34□□□□□ -0.27
PUDP-201ENST00000381077 ZBTB33Q86T24 672 aa13.34□□□□□ -0.27
PUDP-201ENST00000381077 WDTC1Q8N5D0 677 aa13.34□□□□□ -0.27
PUDP-201ENST00000381077 DYDC1Q8WWB3 177 aa13.34□□□□□ -0.27
PUDP-201ENST00000381077 CKAP2Q8WWK9 683 aa13.34□□□□□ -0.27
PUDP-201ENST00000381077 FAM84AQ96KN4 292 aa13.34□□□□□ -0.27
PUDP-201ENST00000381077 FGD4Q96M96 766 aa13.34□□□□□ -0.27
PUDP-201ENST00000381077 ERAP1Q9NZ08 941 aa13.34□□□□□ -0.27
PUDP-201ENST00000381077 KIAA1257Q9ULG3 409 aa13.34□□□□□ -0.27
PUDP-201ENST00000381077 ZNF148Q9UQR1 794 aa13.34□□□□□ -0.27
PUDP-201ENST00000381077 POLR2AP24928 1970 aaKnown RBP13.34□□□□□ -0.27
PUDP-201ENST00000381077 CAPN15O75808 1086 aa13.34□□□□□ -0.27
PUDP-201ENST00000381077 RASSF9O75901 435 aa13.34□□□□□ -0.27
PUDP-201ENST00000381077 OAS1P00973 400 aaKnown RBP13.34□□□□□ -0.27
PUDP-201ENST00000381077 SRGAP2CP0DJJ0 459 aa13.34□□□□□ -0.27
PUDP-201ENST00000381077 KRT3P12035 628 aa13.34□□□□□ -0.27
PUDP-201ENST00000381077 TFAMQ00059 246 aaKnown RBP13.34□□□□□ -0.27
PUDP-201ENST00000381077 MBTD1Q05BQ5 628 aa13.34□□□□□ -0.27
PUDP-201ENST00000381077 XRCC4Q13426 336 aa13.34□□□□□ -0.27
PUDP-201ENST00000381077 STILQ15468 1287 aa13.34□□□□□ -0.27
PUDP-201ENST00000381077 P3H1Q32P28 736 aa13.34□□□□□ -0.27
PUDP-201ENST00000381077 HSDL1Q3SXM5 330 aa13.34□□□□□ -0.27
PUDP-201ENST00000381077 C2CD6Q53TS8 623 aa13.34□□□□□ -0.27
PUDP-201ENST00000381077 LRRC34Q8IZ02 419 aa13.34□□□□□ -0.27
PUDP-201ENST00000381077 SPATA33Q96N06 139 aa13.34□□□□□ -0.27
PUDP-201ENST00000381077 MMP19Q99542 508 aa13.34□□□□□ -0.27
PUDP-201ENST00000381077 PPP1R1BQ9UD71 204 aaPredicted RBP13.34□□□□□ -0.27
PUDP-201ENST00000381077 SLC24A2Q9UI40 661 aa13.34□□□□□ -0.27
PUDP-201ENST00000381077 DNPEPQ9ULA0 475 aa13.34□□□□□ -0.27
PUDP-201ENST00000381077 ALOX15BO15296 676 aa13.33□□□□□ -0.28
PUDP-201ENST00000381077 SNX3O60493 162 aa13.33□□□□□ -0.28
PUDP-201ENST00000381077 ARIH2O95376 493 aa13.33□□□□□ -0.28
PUDP-201ENST00000381077 HMGCRP04035 888 aa13.33□□□□□ -0.28
PUDP-201ENST00000381077 NF2P35240 595 aa13.33□□□□□ -0.28
PUDP-201ENST00000381077 SLC25A11Q02978 314 aaKnown RBP13.33□□□□□ -0.28
PUDP-201ENST00000381077 WDR78Q5VTH9 848 aa13.33□□□□□ -0.28
PUDP-201ENST00000381077 BBS12Q6ZW61 710 aa13.33□□□□□ -0.28
PUDP-201ENST00000381077 CENPUQ71F23 418 aa13.33□□□□□ -0.28
PUDP-201ENST00000381077 VSIG1Q86XK7 387 aa13.33□□□□□ -0.28
PUDP-201ENST00000381077 RHPN2Q8IUC4 686 aa13.33□□□□□ -0.28
PUDP-201ENST00000381077 KAT2BQ92831 832 aa13.33□□□□□ -0.28
PUDP-201ENST00000381077 MAGEB18Q96M61 343 aa13.33□□□□□ -0.28
PUDP-201ENST00000381077 NCAPGQ9BPX3 1015 aa13.33□□□□□ -0.28
PUDP-201ENST00000381077 CDT1Q9H211 546 aa13.33□□□□□ -0.28
PUDP-201ENST00000381077 SSU72Q9NP77 194 aaKnown RBP13.33□□□□□ -0.28
PUDP-201ENST00000381077 NKIRAS1Q9NYS0 192 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms