RNA–Protein interactions for RNA: ENST00000380874.3

FOXC1-201, Transcript of forkhead box C1, humanhuman

APPRIS P1 BASIC

Gene FOXC1, Length 3,926 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1-201ENST00000380874 TXNP10599 105 aaKnown RBP20.57■□□□□ 0.88
FOXC1-201ENST00000380874 KCNA3P22001 575 aa20.57■□□□□ 0.88
FOXC1-201ENST00000380874 MAP2K2P36507 400 aa20.57■□□□□ 0.88
FOXC1-201ENST00000380874 HIRAP54198 1017 aaPredicted RBP20.57■□□□□ 0.88
FOXC1-201ENST00000380874 YARSP54577 528 aaKnown RBP20.57■□□□□ 0.88
FOXC1-201ENST00000380874 HIF1AQ16665 826 aa20.57■□□□□ 0.88
FOXC1-201ENST00000380874 TREML2Q5T2D2 321 aa20.57■□□□□ 0.88
FOXC1-201ENST00000380874 PPP1R2P3Q6NXS1 205 aa20.57■□□□□ 0.88
FOXC1-201ENST00000380874 YTHDF3Q7Z739 585 aaKnown RBP20.57■□□□□ 0.88
FOXC1-201ENST00000380874 TTLL13PA6NNM8 815 aa20.56■□□□□ 0.88
FOXC1-201ENST00000380874 RGS7P49802 495 aa20.56■□□□□ 0.88
FOXC1-201ENST00000380874 MKRN3Q13064 507 aaKnown RBP20.56■□□□□ 0.88
FOXC1-201ENST00000380874 EFCAB12Q6NXP0 572 aa20.56■□□□□ 0.88
FOXC1-201ENST00000380874 PMM2O15305 246 aa20.56■□□□□ 0.88
FOXC1-201ENST00000380874 GRIN3BO60391 1043 aa20.56■□□□□ 0.88
FOXC1-201ENST00000380874 MSH2P43246 934 aa20.56■□□□□ 0.88
FOXC1-201ENST00000380874 OAZ1P54368 228 aa20.56■□□□□ 0.88
FOXC1-201ENST00000380874 SPARCL1Q14515 664 aa20.56■□□□□ 0.88
FOXC1-201ENST00000380874 SURF1Q15526 300 aa20.56■□□□□ 0.88
FOXC1-201ENST00000380874 C1orf228Q6PIY5 440 aa20.56■□□□□ 0.88
FOXC1-201ENST00000380874 BRSK2Q8IWQ3 736 aa20.56■□□□□ 0.88
FOXC1-201ENST00000380874 KATNAL2Q8IYT4 538 aa20.56■□□□□ 0.88
FOXC1-201ENST00000380874 ACTL9Q8TC94 416 aa20.56■□□□□ 0.88
FOXC1-201ENST00000380874 COPS5Q92905 334 aa20.56■□□□□ 0.88
FOXC1-201ENST00000380874 SGSM3Q96HU1 749 aa20.56■□□□□ 0.88
FOXC1-201ENST00000380874 TGFB2P61812 414 aa20.56■□□□□ 0.88
FOXC1-201ENST00000380874 OTUD4Q01804 1114 aaKnown RBP20.56■□□□□ 0.88
FOXC1-201ENST00000380874 PIGHQ14442 188 aaPredicted RBP20.56■□□□□ 0.88
FOXC1-201ENST00000380874 SIX1Q15475 284 aaPredicted RBP20.56■□□□□ 0.88
FOXC1-201ENST00000380874 IER5Q5VY09 327 aa20.56■□□□□ 0.88
FOXC1-201ENST00000380874 PDIK1LQ8N165 341 aa20.56■□□□□ 0.88
FOXC1-201ENST00000380874 NLRP7Q8WX94 980 aa20.56■□□□□ 0.88
FOXC1-201ENST00000380874 NFASCO94856 1347 aa20.56■□□□□ 0.88
FOXC1-201ENST00000380874 FAM47DPA6NHR8 397 aa20.55■□□□□ 0.88
FOXC1-201ENST00000380874 RTP1P59025 263 aa20.55■□□□□ 0.88
FOXC1-201ENST00000380874 SPRED3Q2MJR0 410 aa20.55■□□□□ 0.88
FOXC1-201ENST00000380874 PPP6R3Q5H9R7 873 aaPredicted RBP20.55■□□□□ 0.88
FOXC1-201ENST00000380874 BSPRYQ5W0U4 402 aa20.55■□□□□ 0.88
FOXC1-201ENST00000380874 CYP4X1Q8N118 509 aa20.55■□□□□ 0.88
FOXC1-201ENST00000380874 COL2A1P02458 1487 aaPredicted RBP20.55■□□□□ 0.88
FOXC1-201ENST00000380874 B4GALT5O43286 388 aa20.55■□□□□ 0.88
FOXC1-201ENST00000380874 CPP00450 1065 aa20.55■□□□□ 0.88
FOXC1-201ENST00000380874 ITGB3P05106 788 aa20.55■□□□□ 0.88
FOXC1-201ENST00000380874 DENND1BQ6P3S1 775 aa20.55■□□□□ 0.88
FOXC1-201ENST00000380874 GLIS1Q8NBF1 620 aa20.55■□□□□ 0.88
FOXC1-201ENST00000380874 CENPTQ96BT3 561 aa20.55■□□□□ 0.88
FOXC1-201ENST00000380874 TXLNGYQ9BZA5 131 aa20.55■□□□□ 0.88
FOXC1-201ENST00000380874 DHX33Q9H6R0 707 aaKnown RBP20.55■□□□□ 0.88
FOXC1-201ENST00000380874 KIF9Q9HAQ2 790 aa20.55■□□□□ 0.88
FOXC1-201ENST00000380874 F5H423 210 aaPredicted RBP20.55■□□□□ 0.88
FOXC1-201ENST00000380874 CYP1A1P04798 512 aaPredicted RBP20.55■□□□□ 0.88
FOXC1-201ENST00000380874 ATP4AP20648 1035 aa20.55■□□□□ 0.88
FOXC1-201ENST00000380874 RFC1P35251 1148 aaPredicted RBP20.55■□□□□ 0.88
FOXC1-201ENST00000380874 CDH6P55285 790 aa20.55■□□□□ 0.88
FOXC1-201ENST00000380874 ARL4CP56559 192 aa20.55■□□□□ 0.88
FOXC1-201ENST00000380874 TFDP3Q5H9I0 405 aa20.55■□□□□ 0.88
FOXC1-201ENST00000380874 FAM71DQ8N9W8 422 aa20.55■□□□□ 0.88
FOXC1-201ENST00000380874 DCTN4Q9UJW0 460 aa20.55■□□□□ 0.88
FOXC1-201ENST00000380874 STRIP2Q9ULQ0 834 aa20.55■□□□□ 0.88
FOXC1-201ENST00000380874 EIF3EP60228 445 aaKnown RBP20.54■□□□□ 0.88
FOXC1-201ENST00000380874 MXD4Q14582 209 aaPredicted RBP20.54■□□□□ 0.88
FOXC1-201ENST00000380874 FYB2Q5VWT5 728 aa20.54■□□□□ 0.88
FOXC1-201ENST00000380874 TXNRD3NBQ6F5E7 133 aa20.54■□□□□ 0.88
FOXC1-201ENST00000380874 SESTD1Q86VW0 696 aa20.54■□□□□ 0.88
FOXC1-201ENST00000380874 ATXN2LQ8WWM7 1075 aaKnown RBP20.54■□□□□ 0.88
FOXC1-201ENST00000380874 CFAP36Q96G28 342 aa20.54■□□□□ 0.88
FOXC1-201ENST00000380874 VPS33BQ9H267 617 aa20.54■□□□□ 0.88
FOXC1-201ENST00000380874 ARL2BPQ9Y2Y0 163 aa20.54■□□□□ 0.88
FOXC1-201ENST00000380874 SRRM3A6NNA2 597 aaPredicted RBP20.54■□□□□ 0.88
FOXC1-201ENST00000380874 P4HA1P13674 534 aa20.54■□□□□ 0.88
FOXC1-201ENST00000380874 FASTKD3Q14CZ7 662 aaKnown RBP20.54■□□□□ 0.88
FOXC1-201ENST00000380874 WDR49Q8IV35 697 aa20.54■□□□□ 0.88
FOXC1-201ENST00000380874 FUKQ8N0W3 1084 aa20.54■□□□□ 0.88
FOXC1-201ENST00000380874 KLRG1Q96E93 195 aa20.54■□□□□ 0.88
FOXC1-201ENST00000380874 SLITRK1Q96PX8 696 aa20.54■□□□□ 0.88
FOXC1-201ENST00000380874 SPATC1LQ9H0A9 340 aa20.54■□□□□ 0.88
FOXC1-201ENST00000380874 AGAP1Q9UPQ3 857 aa20.54■□□□□ 0.88
FOXC1-201ENST00000380874 SYNJ2BP-COX16A0A087WUM0 186 aa20.54■□□□□ 0.88
FOXC1-201ENST00000380874 ASAP2O43150 1006 aa20.54■□□□□ 0.88
FOXC1-201ENST00000380874 KRT7P08729 469 aa20.54■□□□□ 0.88
FOXC1-201ENST00000380874 CTCFP49711 727 aaPredicted RBP20.54■□□□□ 0.88
FOXC1-201ENST00000380874 SMAD1Q15797 465 aaKnown RBP20.54■□□□□ 0.88
FOXC1-201ENST00000380874 CRELD2Q6UXH1 353 aaPredicted RBP20.54■□□□□ 0.88
FOXC1-201ENST00000380874 C12orf50Q8NA57 414 aaPredicted RBP20.54■□□□□ 0.88
FOXC1-201ENST00000380874 DDX56Q9NY93 547 aaKnown RBP20.54■□□□□ 0.88
FOXC1-201ENST00000380874 COX16Q9P0S2 106 aa20.54■□□□□ 0.88
FOXC1-201ENST00000380874 CHMP2BQ9UQN3 213 aa20.54■□□□□ 0.88
FOXC1-201ENST00000380874 MAD1L1Q9Y6D9 718 aa20.54■□□□□ 0.88
FOXC1-201ENST00000380874 HSDL1Q3SXM5 330 aa20.53■□□□□ 0.88
FOXC1-201ENST00000380874 EMC10Q5UCC4 262 aa20.53■□□□□ 0.88
FOXC1-201ENST00000380874 SCARA3Q6AZY7 606 aa20.53■□□□□ 0.88
FOXC1-201ENST00000380874 HAPLN2Q9GZV7 340 aa20.53■□□□□ 0.88
FOXC1-201ENST00000380874 AP3M2P53677 418 aa20.53■□□□□ 0.88
FOXC1-201ENST00000380874 VGLL4Q14135 290 aa20.53■□□□□ 0.88
FOXC1-201ENST00000380874 PKN2Q16513 984 aaKnown RBP20.53■□□□□ 0.88
FOXC1-201ENST00000380874 EAPPQ56P03 285 aaPredicted RBP20.53■□□□□ 0.88
FOXC1-201ENST00000380874 EEF1DP3Q658K8 133 aa20.53■□□□□ 0.88
FOXC1-201ENST00000380874 C3orf62Q6ZUJ4 267 aa20.53■□□□□ 0.88
FOXC1-201ENST00000380874 PHF13Q86YI8 300 aaPredicted RBP20.53■□□□□ 0.88
FOXC1-201ENST00000380874 VCPIP1Q96JH7 1222 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms