RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 AMACRQ9UHK6 382 aa12.95□□□□□ -0.34
CHD3-203ENST00000380358 SYNJ1O43426 1573 aa12.95□□□□□ -0.34
CHD3-203ENST00000380358 F5H6K3 240 aa12.95□□□□□ -0.34
CHD3-203ENST00000380358 KLRC3Q07444 240 aa12.95□□□□□ -0.34
CHD3-203ENST00000380358 DPP10Q8N608 796 aa12.95□□□□□ -0.34
CHD3-203ENST00000380358 CALML6Q8TD86 181 aa12.95□□□□□ -0.34
CHD3-203ENST00000380358 C18orf8Q96DM3 657 aa12.95□□□□□ -0.34
CHD3-203ENST00000380358 TOPBP1Q92547 1522 aa12.95□□□□□ -0.34
CHD3-203ENST00000380358 GLRBP48167 497 aa12.95□□□□□ -0.34
CHD3-203ENST00000380358 KCNK10P57789 538 aa12.95□□□□□ -0.34
CHD3-203ENST00000380358 TMEM132BQ14DG7 1078 aa12.95□□□□□ -0.34
CHD3-203ENST00000380358 TXNRD1Q16881 649 aa12.95□□□□□ -0.34
CHD3-203ENST00000380358 CYFIP2Q96F07 1278 aa12.95□□□□□ -0.34
CHD3-203ENST00000380358 NARS2Q96I59 477 aaKnown RBP12.95□□□□□ -0.34
CHD3-203ENST00000380358 DNAJC1Q96KC8 554 aaKnown RBP12.95□□□□□ -0.34
CHD3-203ENST00000380358 A2MP01023 1474 aa12.95□□□□□ -0.34
CHD3-203ENST00000380358 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.95□□□□□ -0.34
CHD3-203ENST00000380358 RAB14P61106 215 aa12.95□□□□□ -0.34
CHD3-203ENST00000380358 ZNF177Q13360 481 aaPredicted RBP12.95□□□□□ -0.34
CHD3-203ENST00000380358 RCN1Q15293 331 aa12.95□□□□□ -0.34
CHD3-203ENST00000380358 MAPRE2Q15555 327 aa12.95□□□□□ -0.34
CHD3-203ENST00000380358 GPRASP2Q96D09 838 aa12.95□□□□□ -0.34
CHD3-203ENST00000380358 METTL5Q9NRN9 209 aaKnown RBP12.95□□□□□ -0.34
CHD3-203ENST00000380358 TBC1D22BQ9NU19 505 aa12.95□□□□□ -0.34
CHD3-203ENST00000380358 CYP39A1Q9NYL5 469 aa12.95□□□□□ -0.34
CHD3-203ENST00000380358 CKBP12277 381 aa12.95□□□□□ -0.34
CHD3-203ENST00000380358 MARSP56192 900 aaKnown RBP12.95□□□□□ -0.34
CHD3-203ENST00000380358 ANGEL2Q5VTE6 544 aaKnown RBP12.95□□□□□ -0.34
CHD3-203ENST00000380358 ZSCAN18Q8TBC5 510 aaPredicted RBP12.95□□□□□ -0.34
CHD3-203ENST00000380358 TMEM169Q96HH4 297 aa12.95□□□□□ -0.34
CHD3-203ENST00000380358 SCN3BQ9NY72 215 aa12.95□□□□□ -0.34
CHD3-203ENST00000380358 ZFYVE9O95405 1425 aa12.95□□□□□ -0.34
CHD3-203ENST00000380358 CCL15-CCL14A0A0B4J2E2 113 aa12.95□□□□□ -0.34
CHD3-203ENST00000380358 LRRIQ3A6PVS8 624 aaPredicted RBP12.95□□□□□ -0.34
CHD3-203ENST00000380358 CFAP99D6REC4 459 aa12.95□□□□□ -0.34
CHD3-203ENST00000380358 CCL15Q16663 113 aa12.95□□□□□ -0.34
CHD3-203ENST00000380358 TRMT11Q7Z4G4 463 aaKnown RBP12.95□□□□□ -0.34
CHD3-203ENST00000380358 MAP3K1Q13233 1512 aa12.95□□□□□ -0.34
CHD3-203ENST00000380358 KATNA1O75449 491 aa12.94□□□□□ -0.34
CHD3-203ENST00000380358 LARGE1O95461 756 aa12.94□□□□□ -0.34
CHD3-203ENST00000380358 PCP11498 1178 aaKnown RBP12.94□□□□□ -0.34
CHD3-203ENST00000380358 IL6STP40189 918 aaPredicted RBP12.94□□□□□ -0.34
CHD3-203ENST00000380358 PSMC6P62333 389 aa12.94□□□□□ -0.34
CHD3-203ENST00000380358 KRT76Q01546 638 aa12.94□□□□□ -0.34
CHD3-203ENST00000380358 POLD3Q15054 466 aaPredicted RBP12.94□□□□□ -0.34
CHD3-203ENST00000380358 MTSS1LQ765P7 747 aa12.94□□□□□ -0.34
CHD3-203ENST00000380358 SKIV2L2P42285 1042 aaKnown RBP12.94□□□□□ -0.34
CHD3-203ENST00000380358 NR1H3Q13133 447 aa12.94□□□□□ -0.34
CHD3-203ENST00000380358 DGKDQ16760 1214 aa12.94□□□□□ -0.34
CHD3-203ENST00000380358 NEK10Q6ZWH5 1172 aa12.94□□□□□ -0.34
CHD3-203ENST00000380358 GLMNQ92990 594 aa12.94□□□□□ -0.34
CHD3-203ENST00000380358 LAMC3Q9Y6N6 1575 aa12.94□□□□□ -0.34
CHD3-203ENST00000380358 ASB14A6NK59 587 aa12.94□□□□□ -0.34
CHD3-203ENST00000380358 SCAMP3O14828 347 aaKnown RBP12.94□□□□□ -0.34
CHD3-203ENST00000380358 BAATQ14032 418 aaPredicted RBP12.94□□□□□ -0.34
CHD3-203ENST00000380358 EPHX4Q8IUS5 362 aa12.94□□□□□ -0.34
CHD3-203ENST00000380358 DHX40Q8IX18 779 aaKnown RBP12.94□□□□□ -0.34
CHD3-203ENST00000380358 WDR36Q8NI36 951 aaKnown RBP12.94□□□□□ -0.34
CHD3-203ENST00000380358 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.94□□□□□ -0.34
CHD3-203ENST00000380358 MSH4O15457 936 aa12.94□□□□□ -0.34
CHD3-203ENST00000380358 PQBP1O60828 265 aaKnown RBP12.94□□□□□ -0.34
CHD3-203ENST00000380358 TFE3P19532 575 aaPredicted RBP12.94□□□□□ -0.34
CHD3-203ENST00000380358 TCEA1P23193 301 aaKnown RBP12.94□□□□□ -0.34
CHD3-203ENST00000380358 SERPINB5P36952 375 aa12.94□□□□□ -0.34
CHD3-203ENST00000380358 SNAP47Q5SQN1 464 aa12.94□□□□□ -0.34
CHD3-203ENST00000380358 SCFD2Q8WU76 684 aa12.94□□□□□ -0.34
CHD3-203ENST00000380358 FAR2Q96K12 515 aa12.94□□□□□ -0.34
CHD3-203ENST00000380358 TK2O00142 265 aa12.94□□□□□ -0.34
CHD3-203ENST00000380358 CDH2P19022 906 aaPredicted RBP12.94□□□□□ -0.34
CHD3-203ENST00000380358 UNC13DQ70J99 1090 aa12.94□□□□□ -0.34
CHD3-203ENST00000380358 CYB5R4Q7L1T6 521 aa12.94□□□□□ -0.34
CHD3-203ENST00000380358 CPB2Q96IY4 423 aa12.94□□□□□ -0.34
CHD3-203ENST00000380358 RPRD1AQ96P16 312 aaPredicted RBP12.94□□□□□ -0.34
CHD3-203ENST00000380358 CEP72Q9P209 647 aa12.94□□□□□ -0.34
CHD3-203ENST00000380358 COX10Q12887 443 aa12.94□□□□□ -0.34
CHD3-203ENST00000380358 SENP7Q9BQF6 1050 aa12.94□□□□□ -0.34
CHD3-203ENST00000380358 SIKE1Q9BRV8 207 aa12.94□□□□□ -0.34
CHD3-203ENST00000380358 PIGBQ92521 554 aa12.93□□□□□ -0.34
CHD3-203ENST00000380358 KLHL31Q9H511 634 aa12.93□□□□□ -0.34
CHD3-203ENST00000380358 TRMT6Q9UJA5 497 aaKnown RBP12.93□□□□□ -0.34
CHD3-203ENST00000380358 MT-CO1P00395 513 aa12.93□□□□□ -0.34
CHD3-203ENST00000380358 RGS2P41220 211 aa12.93□□□□□ -0.34
CHD3-203ENST00000380358 SCARF1Q14162 830 aa12.93□□□□□ -0.34
CHD3-203ENST00000380358 TPD52L3Q96J77 140 aa12.93□□□□□ -0.34
CHD3-203ENST00000380358 CCDC85CA6NKD9 419 aa12.93□□□□□ -0.34
CHD3-203ENST00000380358 MCAMP43121 646 aa12.93□□□□□ -0.34
CHD3-203ENST00000380358 PPP2R2AP63151 447 aa12.93□□□□□ -0.34
CHD3-203ENST00000380358 KLC1Q07866 573 aa12.93□□□□□ -0.34
CHD3-203ENST00000380358 QRICH1Q2TAL8 776 aa12.93□□□□□ -0.34
CHD3-203ENST00000380358 LLGL2Q6P1M3 1020 aa12.93□□□□□ -0.34
CHD3-203ENST00000380358 LDHDQ86WU2 507 aa12.93□□□□□ -0.34
CHD3-203ENST00000380358 VPS37AQ8NEZ2 397 aa12.93□□□□□ -0.34
CHD3-203ENST00000380358 TM6SF1Q9BZW5 370 aa12.93□□□□□ -0.34
CHD3-203ENST00000380358 TRABDQ9H4I3 376 aa12.93□□□□□ -0.34
CHD3-203ENST00000380358 A0A1B0GW55 424 aa12.93□□□□□ -0.34
CHD3-203ENST00000380358 CYP2E1P05181 493 aaPredicted RBP12.93□□□□□ -0.34
CHD3-203ENST00000380358 HOXB7P09629 217 aa12.93□□□□□ -0.34
CHD3-203ENST00000380358 DUX4L2P0CJ85 424 aa12.93□□□□□ -0.34
CHD3-203ENST00000380358 DUX4L3P0CJ86 424 aa12.93□□□□□ -0.34
CHD3-203ENST00000380358 DUX4L4P0CJ87 422 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms