RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 SH3GLB2Q9NR46 395 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 DPP3Q9NY33 737 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 NDOR1Q9UHB4 597 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 SLC45A1Q9Y2W3 748 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 FSBPO95073 299 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 TIMP1P01033 207 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 MYBL1P10243 752 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 PPARGP37231 505 aaPredicted RBP6.89□□□□□ -1.31
NEDD9-202ENST00000379446 ATP2C1P98194 919 aaPredicted RBP6.89□□□□□ -1.31
NEDD9-202ENST00000379446 TBX2Q13207 712 aaPredicted RBP6.89□□□□□ -1.31
NEDD9-202ENST00000379446 EXOC3L4Q17RC7 722 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 SHROOM1Q2M3G4 852 aaPredicted RBP6.89□□□□□ -1.31
NEDD9-202ENST00000379446 USP39Q53GS9 565 aaKnown RBP6.89□□□□□ -1.31
NEDD9-202ENST00000379446 SNAP47Q5SQN1 464 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 MICALCLQ6ZW33 695 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 CCDC25Q86WR0 208 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 TMEM139Q8IV31 216 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 RAB42Q8N4Z0 105 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 TTC39CQ8N584 583 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 KCTD17Q8N5Z5 321 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 DYDC1Q8WWB3 177 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 CABS1Q96KC9 395 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.89□□□□□ -1.318e-8■■□□□ 12.3
NEDD9-202ENST00000379446 YY1AP1Q9H869 796 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 GPRC5CQ9NQ84 441 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 RAB20Q9NX57 234 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 BZW2Q9Y6E2 419 aaKnown RBP6.89□□□□□ -1.31
NEDD9-202ENST00000379446 AFDNP55196 1824 aaKnown RBP6.89□□□□□ -1.31
NEDD9-202ENST00000379446 M0QYT0 321 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 ATP8B1O43520 1251 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 BUB1O43683 1085 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 ATP1A1P05023 1023 aaKnown RBP6.89□□□□□ -1.31
NEDD9-202ENST00000379446 PTPN2P17706 415 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 SDC4P31431 198 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 GGCXP38435 758 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 KLK7P49862 253 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 CRYBB1P53674 252 aaPredicted RBP6.89□□□□□ -1.31
NEDD9-202ENST00000379446 KDSRQ06136 332 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 HABP4Q5JVS0 413 aaKnown RBP6.89□□□□□ -1.31
NEDD9-202ENST00000379446 COLEC12Q5KU26 742 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 SLC51AQ86UW1 340 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.89□□□□□ -1.31
NEDD9-202ENST00000379446 SAMD3Q8N6K7 520 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 RDM1Q8NG50 284 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 HAUS4Q9H6D7 363 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 TSR3Q9UJK0 312 aaKnown RBP6.89□□□□□ -1.31
NEDD9-202ENST00000379446 CNOT1A5YKK6 2376 aaKnown RBP6.89□□□□□ -1.31
NEDD9-202ENST00000379446 NFASCO94856 1347 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.89□□□□□ -1.31
NEDD9-202ENST00000379446 ENO4A6NNW6 628 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 PODXLO00592 558 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 RECQL4O94761 1208 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 IL1BP01584 269 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 MCM3P25205 808 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 GUCY2FP51841 1108 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 ERVK-21P61565 698 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 PSMC1P62191 440 aaKnown RBP6.89□□□□□ -1.31
NEDD9-202ENST00000379446 SLC7A5Q01650 507 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 TROAPQ12815 778 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 LRRC32Q14392 662 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 SUZ12Q15022 739 aaKnown RBP6.89□□□□□ -1.31
NEDD9-202ENST00000379446 SEC23AQ15436 765 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 DAB2IPQ5VWQ8 1189 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 TSHZ1Q6ZSZ6 1077 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 TMCO2Q7Z6W1 182 aaPredicted RBP6.89□□□□□ -1.31
NEDD9-202ENST00000379446 ZNF410Q86VK4 478 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 RSAD2Q8WXG1 361 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 NECTIN4Q96NY8 510 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 TMEM60Q9H2L4 133 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 PRDM16Q9HAZ2 1276 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 OLA1Q9NTK5 396 aaKnown RBP6.89□□□□□ -1.31
NEDD9-202ENST00000379446 FAM105AQ9NUU6 356 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 NCOR1O75376 2440 aa6.89□□□□□ -1.31
NEDD9-202ENST00000379446 CNTNAP5Q8WYK1 1306 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 FANCGO15287 622 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 DNAJC6O75061 913 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 POLR2EP19388 210 aaKnown RBP6.88□□□□□ -1.31
NEDD9-202ENST00000379446 NMT1P30419 496 aaKnown RBP6.88□□□□□ -1.31
NEDD9-202ENST00000379446 MAGEA1P43355 309 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 SARSP49591 514 aaKnown RBP6.88□□□□□ -1.31
NEDD9-202ENST00000379446 POM121L1PQ3SYA9 428 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 C6orf163Q5TEZ5 329 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 OLFML2BQ68BL8 750 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 RINT1Q6NUQ1 792 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 RFX6Q8HWS3 928 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 ARHGAP18Q8N392 663 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 IRF7Q92985 503 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 ATP6V1E2Q96A05 226 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 CALR3Q96L12 384 aaKnown RBP6.88□□□□□ -1.31
NEDD9-202ENST00000379446 MED15Q96RN5 788 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 BBS2Q9BXC9 721 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 SARS2Q9NP81 518 aaKnown RBP6.88□□□□□ -1.31
NEDD9-202ENST00000379446 DDX43Q9NXZ2 648 aaKnown RBP6.88□□□□□ -1.31
NEDD9-202ENST00000379446 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.88□□□□□ -1.31
NEDD9-202ENST00000379446 AFF4Q9UHB7 1163 aaKnown RBP6.88□□□□□ -1.31
NEDD9-202ENST00000379446 MRC1P22897 1456 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 TBX3O15119 743 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 ZNF185O15231 689 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 NCAM1P13591 858 aa6.88□□□□□ -1.31
NEDD9-202ENST00000379446 PAX7P23759 505 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms