RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 ALG3Q92685 438 aa20.6■□□□□ 0.89
SSU72-204ENST00000378726 NOC2LQ9Y3T9 749 aaKnown RBP20.6■□□□□ 0.89
SSU72-204ENST00000378726 RAD51CO43502 376 aa20.59■□□□□ 0.89
SSU72-204ENST00000378726 LIG3P49916 1009 aa20.59■□□□□ 0.89
SSU72-204ENST00000378726 C1QBPQ07021 282 aaKnown RBP20.59■□□□□ 0.89
SSU72-204ENST00000378726 UBXN11Q5T124 520 aa20.59■□□□□ 0.89
SSU72-204ENST00000378726 MREGQ8N565 214 aa20.59■□□□□ 0.89
SSU72-204ENST00000378726 TMEM35BQ8NCS4 154 aa20.59■□□□□ 0.89
SSU72-204ENST00000378726 KRT35Q92764 455 aa20.59■□□□□ 0.89
SSU72-204ENST00000378726 RNPC3Q96LT9 517 aaKnown RBP20.59■□□□□ 0.89
SSU72-204ENST00000378726 WNT8AQ9H1J5 351 aa20.59■□□□□ 0.89
SSU72-204ENST00000378726 RNF19AQ9NV58 838 aa20.59■□□□□ 0.89
SSU72-204ENST00000378726 PCDHGC3Q9UN70 934 aa20.59■□□□□ 0.89
SSU72-204ENST00000378726 SPOPO43791 374 aa20.59■□□□□ 0.89
SSU72-204ENST00000378726 LSM8O95777 96 aaKnown RBP20.59■□□□□ 0.89
SSU72-204ENST00000378726 STAU1O95793 577 aaKnown RBP20.59■□□□□ 0.89
SSU72-204ENST00000378726 MRPS6P82932 125 aaKnown RBP20.59■□□□□ 0.89
SSU72-204ENST00000378726 PTP4A2Q12974 167 aa20.59■□□□□ 0.89
SSU72-204ENST00000378726 GLRA4Q5JXX5 417 aa20.59■□□□□ 0.89
SSU72-204ENST00000378726 CPNE8Q86YQ8 564 aa20.59■□□□□ 0.89
SSU72-204ENST00000378726 KLHL7Q8IXQ5 586 aa20.59■□□□□ 0.89
SSU72-204ENST00000378726 WDTC1Q8N5D0 677 aa20.59■□□□□ 0.89
SSU72-204ENST00000378726 WHAMMQ8TF30 809 aa20.59■□□□□ 0.89
SSU72-204ENST00000378726 AP1M1Q9BXS5 423 aa20.59■□□□□ 0.89
SSU72-204ENST00000378726 TRIM7Q9C029 511 aa20.59■□□□□ 0.89
SSU72-204ENST00000378726 RNF39Q9H2S5 420 aa20.59■□□□□ 0.89
SSU72-204ENST00000378726 SRRDQ9UH36 339 aa20.59■□□□□ 0.89
SSU72-204ENST00000378726 TTC7AQ9ULT0 858 aaPredicted RBP20.59■□□□□ 0.89
SSU72-204ENST00000378726 CDY2AQ9Y6F7 541 aa20.59■□□□□ 0.89
SSU72-204ENST00000378726 M0QZ92 97 aa20.58■□□□□ 0.89
SSU72-204ENST00000378726 MYO1FO00160 1098 aa20.58■□□□□ 0.89
SSU72-204ENST00000378726 CILPO75339 1184 aa20.58■□□□□ 0.89
SSU72-204ENST00000378726 PAEPP09466 180 aa20.58■□□□□ 0.89
SSU72-204ENST00000378726 MMP8P22894 467 aa20.58■□□□□ 0.89
SSU72-204ENST00000378726 HOXD10P28358 340 aa20.58■□□□□ 0.89
SSU72-204ENST00000378726 PEX5P50542 639 aa20.58■□□□□ 0.89
SSU72-204ENST00000378726 TNNC1P63316 161 aa20.58■□□□□ 0.89
SSU72-204ENST00000378726 MYO1EQ12965 1108 aa20.58■□□□□ 0.89
SSU72-204ENST00000378726 ORC1Q13415 861 aa20.58■□□□□ 0.89
SSU72-204ENST00000378726 ICE2Q659A1 982 aa20.58■□□□□ 0.89
SSU72-204ENST00000378726 RSPH3Q86UC2 560 aa20.58■□□□□ 0.89
SSU72-204ENST00000378726 FAM228AQ86W67 206 aa20.58■□□□□ 0.89
SSU72-204ENST00000378726 C1orf131Q8NDD1 294 aaKnown RBP20.58■□□□□ 0.89
SSU72-204ENST00000378726 KLHDC9Q8NEP7 349 aa20.58■□□□□ 0.89
SSU72-204ENST00000378726 BEST2Q8NFU1 509 aa20.58■□□□□ 0.89
SSU72-204ENST00000378726 CD101Q93033 1021 aa20.58■□□□□ 0.89
SSU72-204ENST00000378726 ZNF518BQ9C0D4 1074 aa20.58■□□□□ 0.89
SSU72-204ENST00000378726 MRPL47Q9HD33 250 aaKnown RBP20.58■□□□□ 0.89
SSU72-204ENST00000378726 CREBZFQ9NS37 354 aa20.58■□□□□ 0.89
SSU72-204ENST00000378726 KLK14Q9P0G3 267 aa20.58■□□□□ 0.89
SSU72-204ENST00000378726 CNTN3Q9P232 1028 aa20.58■□□□□ 0.89
SSU72-204ENST00000378726 PARP2Q9UGN5 583 aa20.58■□□□□ 0.89
SSU72-204ENST00000378726 DNAH12Q6ZR08 3092 aa20.58■□□□□ 0.89
SSU72-204ENST00000378726 CITO14578 2027 aa20.58■□□□□ 0.89
SSU72-204ENST00000378726 KRIT1O00522 736 aa20.58■□□□□ 0.88
SSU72-204ENST00000378726 FGGP02679 453 aa20.58■□□□□ 0.88
SSU72-204ENST00000378726 ZNF211Q13398 564 aaPredicted RBP20.58■□□□□ 0.88
SSU72-204ENST00000378726 MAMLD1Q13495 774 aa20.58■□□□□ 0.88
SSU72-204ENST00000378726 KDM7AQ6ZMT4 941 aa20.58■□□□□ 0.88
SSU72-204ENST00000378726 SLC4A11Q8NBS3 891 aa20.58■□□□□ 0.88
SSU72-204ENST00000378726 C18orf25Q96B23 403 aaPredicted RBP20.58■□□□□ 0.88
SSU72-204ENST00000378726 TMEM176AQ96HP8 235 aa20.58■□□□□ 0.88
SSU72-204ENST00000378726 TWNKQ96RR1 684 aa20.58■□□□□ 0.88
SSU72-204ENST00000378726 ELOVL4Q9GZR5 314 aa20.58■□□□□ 0.88
SSU72-204ENST00000378726 MED7O43513 233 aa20.57■□□□□ 0.88
SSU72-204ENST00000378726 MARCKSL1P49006 195 aa20.57■□□□□ 0.88
SSU72-204ENST00000378726 PLEKHA7Q6IQ23 1121 aa20.57■□□□□ 0.88
SSU72-204ENST00000378726 CD99L2Q8TCZ2 262 aa20.57■□□□□ 0.88
SSU72-204ENST00000378726 TUBGCP4Q9UGJ1 667 aa20.57■□□□□ 0.88
SSU72-204ENST00000378726 HMGXB4Q9UGU5 601 aa20.57■□□□□ 0.88
SSU72-204ENST00000378726 CEP83Q9Y592 693 aa20.57■□□□□ 0.88
SSU72-204ENST00000378726 PCDHA3Q9Y5H8 950 aa20.57■□□□□ 0.88
SSU72-204ENST00000378726 TRPV2Q9Y5S1 764 aa20.57■□□□□ 0.88
SSU72-204ENST00000378726 NDUFAB1O14561 156 aa20.57■□□□□ 0.88
SSU72-204ENST00000378726 GUCY1A3Q02108 690 aa20.57■□□□□ 0.88
SSU72-204ENST00000378726 TWF2Q6IBS0 349 aaKnown RBP20.57■□□□□ 0.88
SSU72-204ENST00000378726 WNT8BQ93098 351 aa20.57■□□□□ 0.88
SSU72-204ENST00000378726 YY1AP1Q9H869 796 aa20.57■□□□□ 0.88
SSU72-204ENST00000378726 PARVAQ9NVD7 372 aa20.57■□□□□ 0.88
SSU72-204ENST00000378726 IPPQ9Y573 584 aa20.57■□□□□ 0.88
SSU72-204ENST00000378726 SMIM28A0A1B0GU29 152 aa20.56■□□□□ 0.88
SSU72-204ENST00000378726 PPEF2O14830 753 aa20.56■□□□□ 0.88
SSU72-204ENST00000378726 CDH5P33151 784 aaPredicted RBP20.56■□□□□ 0.88
SSU72-204ENST00000378726 GTF2A1P52655 376 aaPredicted RBP20.56■□□□□ 0.88
SSU72-204ENST00000378726 CCSAPQ6IQ19 270 aaPredicted RBP20.56■□□□□ 0.88
SSU72-204ENST00000378726 DENND1BQ6P3S1 775 aa20.56■□□□□ 0.88
SSU72-204ENST00000378726 SERINC5Q86VE9 423 aa20.56■□□□□ 0.88
SSU72-204ENST00000378726 CFHR5Q9BXR6 569 aa20.56■□□□□ 0.88
SSU72-204ENST00000378726 BARX2Q9UMQ3 279 aaPredicted RBP20.56■□□□□ 0.88
SSU72-204ENST00000378726 UBQLN1Q9UMX0 589 aaKnown RBP20.56■□□□□ 0.88
SSU72-204ENST00000378726 SCINQ9Y6U3 715 aa20.56■□□□□ 0.88
SSU72-204ENST00000378726 SCN10AQ9Y5Y9 1956 aa20.56■□□□□ 0.88
SSU72-204ENST00000378726 A6NNZ2 444 aa20.55■□□□□ 0.88
SSU72-204ENST00000378726 TLR3O15455 904 aaKnown RBP20.55■□□□□ 0.88
SSU72-204ENST00000378726 CALB1P05937 261 aa20.55■□□□□ 0.88
SSU72-204ENST00000378726 CTNNA1P35221 906 aaKnown RBP20.55■□□□□ 0.88
SSU72-204ENST00000378726 PTPN11Q06124 597 aaPredicted RBP20.55■□□□□ 0.88
SSU72-204ENST00000378726 NFX1Q12986 1120 aaKnown RBP20.55■□□□□ 0.88
SSU72-204ENST00000378726 TUBB8Q3ZCM7 444 aa20.55■□□□□ 0.88
SSU72-204ENST00000378726 ERICH1Q86X53 443 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms