RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 ERP44Q9BS26 406 aa12.52□□□□□ -0.41
PCDHA9-201ENST00000378122 NFKBIL1Q9UBC1 381 aaPredicted RBP12.52□□□□□ -0.41
PCDHA9-201ENST00000378122 NPM3O75607 178 aaKnown RBP12.52□□□□□ -0.41
PCDHA9-201ENST00000378122 RBBP8NLQ8NC74 664 aaPredicted RBP12.52□□□□□ -0.41
PCDHA9-201ENST00000378122 OR9Q1Q8NGQ5 310 aa12.52□□□□□ -0.41
PCDHA9-201ENST00000378122 C18orf8Q96DM3 657 aa12.52□□□□□ -0.41
PCDHA9-201ENST00000378122 SYTL2Q9HCH5 934 aa12.52□□□□□ -0.41
PCDHA9-201ENST00000378122 CNTNAP5Q8WYK1 1306 aa12.52□□□□□ -0.41
PCDHA9-201ENST00000378122 TULP4Q9NRJ4 1543 aa12.52□□□□□ -0.41
PCDHA9-201ENST00000378122 TBC1D4O60343 1298 aa12.52□□□□□ -0.41
PCDHA9-201ENST00000378122 RALAP11233 206 aa12.52□□□□□ -0.41
PCDHA9-201ENST00000378122 CPT1AP50416 773 aa12.52□□□□□ -0.41
PCDHA9-201ENST00000378122 PDAP1Q13442 181 aaKnown RBP12.52□□□□□ -0.41
PCDHA9-201ENST00000378122 MTHFD1LQ6UB35 978 aa12.52□□□□□ -0.41
PCDHA9-201ENST00000378122 TRAPPC11Q7Z392 1133 aa12.52□□□□□ -0.41
PCDHA9-201ENST00000378122 LDHDQ86WU2 507 aa12.52□□□□□ -0.41
PCDHA9-201ENST00000378122 TEX12Q9BXU0 123 aa12.52□□□□□ -0.41
PCDHA9-201ENST00000378122 H2AFXP16104 143 aaPredicted RBP12.51□□□□□ -0.41
PCDHA9-201ENST00000378122 CLEC10AQ8IUN9 316 aa12.51□□□□□ -0.41
PCDHA9-201ENST00000378122 NEUROG2Q9H2A3 272 aa12.51□□□□□ -0.41
PCDHA9-201ENST00000378122 MRPL42Q9Y6G3 142 aaKnown RBP12.51□□□□□ -0.41
PCDHA9-201ENST00000378122 MAGEA13PA6NCF6 341 aa12.51□□□□□ -0.41
PCDHA9-201ENST00000378122 TMBIM4Q9HC24 238 aa12.51□□□□□ -0.41
PCDHA9-201ENST00000378122 ZSCAN32Q9NX65 697 aa12.51□□□□□ -0.41
PCDHA9-201ENST00000378122 H0Y626 953 aa12.51□□□□□ -0.41
PCDHA9-201ENST00000378122 POLRMTO00411 1230 aaKnown RBP12.51□□□□□ -0.41
PCDHA9-201ENST00000378122 ZC3H11AO75152 810 aaKnown RBP eCLIP12.51□□□□□ -0.41
PCDHA9-201ENST00000378122 GRAP2O75791 330 aa12.51□□□□□ -0.41
PCDHA9-201ENST00000378122 TRIM16O95361 564 aa12.51□□□□□ -0.41
PCDHA9-201ENST00000378122 TMEM253P0C7T8 217 aa12.51□□□□□ -0.41
PCDHA9-201ENST00000378122 GFAPP14136 432 aa12.51□□□□□ -0.41
PCDHA9-201ENST00000378122 RCN1Q15293 331 aa12.51□□□□□ -0.41
PCDHA9-201ENST00000378122 RABL6Q3YEC7 729 aaPredicted RBP12.51□□□□□ -0.41
PCDHA9-201ENST00000378122 KLHDC7AQ5VTJ3 777 aa12.51□□□□□ -0.41
PCDHA9-201ENST00000378122 TPCN2Q8NHX9 752 aa12.51□□□□□ -0.41
PCDHA9-201ENST00000378122 PI4K2AQ9BTU6 479 aa12.51□□□□□ -0.41
PCDHA9-201ENST00000378122 CCDC134Q9H6E4 229 aa12.51□□□□□ -0.41
PCDHA9-201ENST00000378122 CERS4Q9HA82 394 aa12.51□□□□□ -0.41
PCDHA9-201ENST00000378122 IL1RL2Q9HB29 575 aa12.51□□□□□ -0.41
PCDHA9-201ENST00000378122 TLR2O60603 784 aa12.51□□□□□ -0.41
PCDHA9-201ENST00000378122 IFNA8P32881 189 aa12.51□□□□□ -0.41
PCDHA9-201ENST00000378122 UBE3AQ05086 875 aa12.51□□□□□ -0.41
PCDHA9-201ENST00000378122 PIGHQ14442 188 aaPredicted RBP12.51□□□□□ -0.41
PCDHA9-201ENST00000378122 USP10Q14694 798 aaKnown RBP12.51□□□□□ -0.41
PCDHA9-201ENST00000378122 CYP4A22Q5TCH4 519 aa12.51□□□□□ -0.41
PCDHA9-201ENST00000378122 IL31Q6EBC2 164 aa12.51□□□□□ -0.41
PCDHA9-201ENST00000378122 TMED8Q6PL24 325 aaPredicted RBP12.51□□□□□ -0.41
PCDHA9-201ENST00000378122 PIK3R5Q8WYR1 880 aa12.51□□□□□ -0.41
PCDHA9-201ENST00000378122 DONSONQ9NYP3 566 aa12.51□□□□□ -0.41
PCDHA9-201ENST00000378122 HPS5Q9UPZ3 1129 aa12.51□□□□□ -0.41
PCDHA9-201ENST00000378122 PLEKHG2Q9H7P9 1386 aa12.51□□□□□ -0.41
PCDHA9-201ENST00000378122 KLHL2O95198 593 aa12.51□□□□□ -0.41
PCDHA9-201ENST00000378122 NLRP11P59045 1033 aaKnown RBP12.51□□□□□ -0.41
PCDHA9-201ENST00000378122 OVGP1Q12889 678 aa12.51□□□□□ -0.41
PCDHA9-201ENST00000378122 RNF149Q8NC42 400 aa12.51□□□□□ -0.41
PCDHA9-201ENST00000378122 RMDN1Q96DB5 314 aa12.51□□□□□ -0.41
PCDHA9-201ENST00000378122 HAO1Q9UJM8 370 aa12.51□□□□□ -0.41
PCDHA9-201ENST00000378122 PCDHA10Q9Y5I2 948 aa12.51□□□□□ -0.41
PCDHA9-201ENST00000378122 MYO1GB0I1T2 1018 aa12.51□□□□□ -0.41
PCDHA9-201ENST00000378122 KRT8P05787 483 aa12.51□□□□□ -0.41
PCDHA9-201ENST00000378122 ACTR2P61160 394 aa12.51□□□□□ -0.41
PCDHA9-201ENST00000378122 RPS6P62753 249 aaKnown RBP12.51□□□□□ -0.41
PCDHA9-201ENST00000378122 EPC2Q52LR7 807 aa12.51□□□□□ -0.41
PCDHA9-201ENST00000378122 CLEC4FQ8N1N0 589 aa12.51□□□□□ -0.41
PCDHA9-201ENST00000378122 B4GALNT2Q8NHY0 566 aa12.51□□□□□ -0.41
PCDHA9-201ENST00000378122 KCNK16Q96T55 309 aa12.51□□□□□ -0.41
PCDHA9-201ENST00000378122 TJP2Q9UDY2 1190 aa12.51□□□□□ -0.41
PCDHA9-201ENST00000378122 SLC25A13Q9UJS0 675 aa12.51□□□□□ -0.41
PCDHA9-201ENST00000378122 HERVK_113P62684 666 aa12.5□□□□□ -0.41
PCDHA9-201ENST00000378122 DMC1Q14565 340 aa12.5□□□□□ -0.41
PCDHA9-201ENST00000378122 POTEAQ6S8J7 498 aa12.5□□□□□ -0.41
PCDHA9-201ENST00000378122 RUBCNLQ9H714 662 aa12.5□□□□□ -0.41
PCDHA9-201ENST00000378122 METTL5Q9NRN9 209 aaKnown RBP12.5□□□□□ -0.41
PCDHA9-201ENST00000378122 DUSP10Q9Y6W6 482 aa12.5□□□□□ -0.41
PCDHA9-201ENST00000378122 FLT1P17948 1338 aa12.5□□□□□ -0.41
PCDHA9-201ENST00000378122 TTC23LQ6PF05 361 aa12.5□□□□□ -0.41
PCDHA9-201ENST00000378122 COL23A1Q86Y22 540 aaPredicted RBP12.5□□□□□ -0.41
PCDHA9-201ENST00000378122 ENGASEQ8NFI3 743 aa12.5□□□□□ -0.41
PCDHA9-201ENST00000378122 THAP2Q9H0W7 228 aa12.5□□□□□ -0.41
PCDHA9-201ENST00000378122 JPH1Q9HDC5 661 aaPredicted RBP12.5□□□□□ -0.41
PCDHA9-201ENST00000378122 ZNF70Q9UC06 446 aaPredicted RBP12.5□□□□□ -0.41
PCDHA9-201ENST00000378122 TRAPPC3O43617 180 aa12.5□□□□□ -0.41
PCDHA9-201ENST00000378122 MYO1DO94832 1006 aa12.5□□□□□ -0.41
PCDHA9-201ENST00000378122 SERPINB9P50453 376 aa12.5□□□□□ -0.41
PCDHA9-201ENST00000378122 GEMIN4P57678 1058 aaKnown RBP12.5□□□□□ -0.41
PCDHA9-201ENST00000378122 PLA2G4FQ68DD2 849 aa12.5□□□□□ -0.41
PCDHA9-201ENST00000378122 MYCBPAPQ8TBZ2 947 aa12.5□□□□□ -0.41
PCDHA9-201ENST00000378122 CMTM5Q96DZ9 223 aa12.5□□□□□ -0.41
PCDHA9-201ENST00000378122 L3MBTL3Q96JM7 780 aaPredicted RBP12.5□□□□□ -0.41
PCDHA9-201ENST00000378122 PHTF1Q9UMS5 762 aa12.5□□□□□ -0.41
PCDHA9-201ENST00000378122 ALG6Q9Y672 507 aa12.5□□□□□ -0.41
PCDHA9-201ENST00000378122 SETBP1Q9Y6X0 1596 aa12.5□□□□□ -0.41
PCDHA9-201ENST00000378122 IQSEC2Q5JU85 1478 aa12.5□□□□□ -0.41
PCDHA9-201ENST00000378122 RAP1GDS1P52306 607 aa12.5□□□□□ -0.41
PCDHA9-201ENST00000378122 OSBPL8Q9BZF1 889 aa12.5□□□□□ -0.41
PCDHA9-201ENST00000378122 MUC3BQ9H195 1237 aa12.5□□□□□ -0.41
PCDHA9-201ENST00000378122 AIPL1Q9NZN9 384 aa12.5□□□□□ -0.41
PCDHA9-201ENST00000378122 PPIEQ9UNP9 301 aaKnown RBP12.5□□□□□ -0.41
PCDHA9-201ENST00000378122 PCDHB9Q9Y5E1 797 aa12.5□□□□□ -0.41
PCDHA9-201ENST00000378122 PNPLA6Q8IY17 1366 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms