RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 TAF1LQ8IZX4 1826 aa16.48■□□□□ 0.23
CSNK1A1-202ENST00000377843 SUPT3HO75486 399 aa16.47■□□□□ 0.23
CSNK1A1-202ENST00000377843 OATP04181 439 aa16.47■□□□□ 0.23
CSNK1A1-202ENST00000377843 VARSP26640 1264 aaKnown RBP16.47■□□□□ 0.23
CSNK1A1-202ENST00000377843 NOVP48745 357 aa16.47■□□□□ 0.23
CSNK1A1-202ENST00000377843 PDE1BQ01064 536 aa16.47■□□□□ 0.23
CSNK1A1-202ENST00000377843 TMED1Q13445 227 aa16.47■□□□□ 0.23
CSNK1A1-202ENST00000377843 PRR16Q569H4 304 aa16.47■□□□□ 0.23
CSNK1A1-202ENST00000377843 CCDC174Q6PII3 467 aa16.47■□□□□ 0.23
CSNK1A1-202ENST00000377843 DHDDSQ86SQ9 333 aa16.47■□□□□ 0.23
CSNK1A1-202ENST00000377843 BBOF1Q8ND07 529 aa16.47■□□□□ 0.23
CSNK1A1-202ENST00000377843 ELMO3Q96BJ8 720 aa16.47■□□□□ 0.23
CSNK1A1-202ENST00000377843 HAUS1Q96CS2 278 aa16.47■□□□□ 0.23
CSNK1A1-202ENST00000377843 KREMEN1Q96MU8 473 aa16.47■□□□□ 0.23
CSNK1A1-202ENST00000377843 CATSPER2Q96P56 530 aa16.47■□□□□ 0.23
CSNK1A1-202ENST00000377843 VPS11Q9H270 941 aa16.47■□□□□ 0.23
CSNK1A1-202ENST00000377843 UVRAGQ9P2Y5 699 aa16.47■□□□□ 0.23
CSNK1A1-202ENST00000377843 FRMD4BQ9Y2L6 1034 aa16.47■□□□□ 0.23
CSNK1A1-202ENST00000377843 DDX60LQ5H9U9 1706 aaKnown RBP16.47■□□□□ 0.23
CSNK1A1-202ENST00000377843 TISP43B9A030 160 aa16.47■□□□□ 0.23
CSNK1A1-202ENST00000377843 ONECUT3O60422 494 aaPredicted RBP16.47■□□□□ 0.23
CSNK1A1-202ENST00000377843 CIB2O75838 187 aa16.47■□□□□ 0.23
CSNK1A1-202ENST00000377843 SORBS2O94875 1100 aaKnown RBP16.47■□□□□ 0.23
CSNK1A1-202ENST00000377843 EIF4BP23588 611 aaKnown RBP16.47■□□□□ 0.23
CSNK1A1-202ENST00000377843 GCLMP48507 274 aa16.47■□□□□ 0.23
CSNK1A1-202ENST00000377843 SH3BGRP55822 239 aaPredicted RBP16.47■□□□□ 0.23
CSNK1A1-202ENST00000377843 CENPCQ03188 943 aa16.47■□□□□ 0.23
CSNK1A1-202ENST00000377843 GAD2Q05329 585 aa16.47■□□□□ 0.23
CSNK1A1-202ENST00000377843 ASPHQ12797 758 aa16.47■□□□□ 0.23
CSNK1A1-202ENST00000377843 CCNG2Q16589 344 aa16.47■□□□□ 0.23
CSNK1A1-202ENST00000377843 NFIL3Q16649 462 aa16.47■□□□□ 0.23
CSNK1A1-202ENST00000377843 PARP10Q53GL7 1025 aa16.47■□□□□ 0.23
CSNK1A1-202ENST00000377843 SH3D19Q5HYK7 790 aa16.47■□□□□ 0.23
CSNK1A1-202ENST00000377843 KLC3Q6P597 504 aa16.47■□□□□ 0.23
CSNK1A1-202ENST00000377843 B3GNT6Q6ZMB0 384 aa16.47■□□□□ 0.23
CSNK1A1-202ENST00000377843 GSTA5Q7RTV2 222 aa16.47■□□□□ 0.23
CSNK1A1-202ENST00000377843 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.47■□□□□ 0.23
CSNK1A1-202ENST00000377843 PLVAPQ9BX97 442 aa16.47■□□□□ 0.23
CSNK1A1-202ENST00000377843 GPAMQ9HCL2 828 aa16.47■□□□□ 0.23
CSNK1A1-202ENST00000377843 S100A14Q9HCY8 104 aa16.47■□□□□ 0.23
CSNK1A1-202ENST00000377843 CLUHO75153 1309 aa16.47■□□□□ 0.23
CSNK1A1-202ENST00000377843 MEI4A8MW99 385 aa16.46■□□□□ 0.23
CSNK1A1-202ENST00000377843 USP17L10C9JJH3 530 aa16.46■□□□□ 0.23
CSNK1A1-202ENST00000377843 ADRA2BP18089 450 aa16.46■□□□□ 0.23
CSNK1A1-202ENST00000377843 SEPT7Q16181 437 aaKnown RBP16.46■□□□□ 0.23
CSNK1A1-202ENST00000377843 C2CD6Q53TS8 623 aa16.46■□□□□ 0.23
CSNK1A1-202ENST00000377843 EFHC2Q5JST6 749 aa16.46■□□□□ 0.23
CSNK1A1-202ENST00000377843 FAM91A1Q658Y4 838 aa16.46■□□□□ 0.23
CSNK1A1-202ENST00000377843 KRT27Q7Z3Y8 459 aa16.46■□□□□ 0.23
CSNK1A1-202ENST00000377843 LARGE2Q8N3Y3 721 aa16.46■□□□□ 0.23
CSNK1A1-202ENST00000377843 RBM38Q9H0Z9 239 aaKnown RBP16.46■□□□□ 0.23
CSNK1A1-202ENST00000377843 SSU72Q9NP77 194 aaKnown RBP16.46■□□□□ 0.23
CSNK1A1-202ENST00000377843 SLC24A2Q9UI40 661 aa16.46■□□□□ 0.23
CSNK1A1-202ENST00000377843 BTAF1O14981 1849 aa16.46■□□□□ 0.23
CSNK1A1-202ENST00000377843 DNALI1O14645 258 aaPredicted RBP16.46■□□□□ 0.23
CSNK1A1-202ENST00000377843 EIF3DO15371 548 aaKnown RBP eCLIP16.46■□□□□ 0.23
CSNK1A1-202ENST00000377843 RPS6KA4O75676 772 aa16.46■□□□□ 0.23
CSNK1A1-202ENST00000377843 YY1P25490 414 aa16.46■□□□□ 0.23
CSNK1A1-202ENST00000377843 MAPK4P31152 587 aa16.46■□□□□ 0.23
CSNK1A1-202ENST00000377843 CHN2P52757 468 aa16.46■□□□□ 0.23
CSNK1A1-202ENST00000377843 ITGA9Q13797 1035 aa16.46■□□□□ 0.23
CSNK1A1-202ENST00000377843 RASA3Q14644 834 aa16.46■□□□□ 0.23
CSNK1A1-202ENST00000377843 C1orf220Q5T0J3 134 aa16.46■□□□□ 0.23
CSNK1A1-202ENST00000377843 PPP1R18Q6NYC8 613 aa16.46■□□□□ 0.23
CSNK1A1-202ENST00000377843 ZNF554Q86TJ5 538 aa16.46■□□□□ 0.23
CSNK1A1-202ENST00000377843 FAM71AQ8IYT1 594 aa16.46■□□□□ 0.23
CSNK1A1-202ENST00000377843 ZBTB8BQ8NAP8 495 aaPredicted RBP16.46■□□□□ 0.23
CSNK1A1-202ENST00000377843 ZSWIM2Q8NEG5 633 aa16.46■□□□□ 0.23
CSNK1A1-202ENST00000377843 SLC35B4Q969S0 331 aa16.46■□□□□ 0.23
CSNK1A1-202ENST00000377843 ARHGEF38Q9NXL2 777 aa16.46■□□□□ 0.23
CSNK1A1-202ENST00000377843 RABGEF1Q9UJ41 708 aa16.46■□□□□ 0.23
CSNK1A1-202ENST00000377843 A0A088AWK7 358 aa16.45■□□□□ 0.22
CSNK1A1-202ENST00000377843 C15orf38-AP3S2A0A0A6YYH1 394 aa16.45■□□□□ 0.22
CSNK1A1-202ENST00000377843 GOLGA8SH3BPF8 625 aa16.45■□□□□ 0.22
CSNK1A1-202ENST00000377843 GOLGA8MH3BSY2 632 aa16.45■□□□□ 0.22
CSNK1A1-202ENST00000377843 TGDSO95455 350 aa16.45■□□□□ 0.22
CSNK1A1-202ENST00000377843 RFX1P22670 979 aa16.45■□□□□ 0.22
CSNK1A1-202ENST00000377843 SSTR1P30872 391 aa16.45■□□□□ 0.22
CSNK1A1-202ENST00000377843 MTM1Q13496 603 aa16.45■□□□□ 0.22
CSNK1A1-202ENST00000377843 TFDP1Q14186 410 aa16.45■□□□□ 0.22
CSNK1A1-202ENST00000377843 NADK2Q4G0N4 442 aa16.45■□□□□ 0.22
CSNK1A1-202ENST00000377843 EPC2Q52LR7 807 aa16.45■□□□□ 0.22
CSNK1A1-202ENST00000377843 ARPINQ7Z6K5 226 aa16.45■□□□□ 0.22
CSNK1A1-202ENST00000377843 LENG9Q96B70 501 aa16.45■□□□□ 0.22
CSNK1A1-202ENST00000377843 MBOAT7Q96N66 472 aa16.45■□□□□ 0.22
CSNK1A1-202ENST00000377843 THSD7AQ9UPZ6 1657 aa16.45■□□□□ 0.22
CSNK1A1-202ENST00000377843 CYP3A7-CYP3A51PA0A087WV96 503 aa16.45■□□□□ 0.22
CSNK1A1-202ENST00000377843 TULP1O00294 542 aaPredicted RBP16.45■□□□□ 0.22
CSNK1A1-202ENST00000377843 ALOX15BO15296 676 aa16.45■□□□□ 0.22
CSNK1A1-202ENST00000377843 SLC26A4O43511 780 aa16.45■□□□□ 0.22
CSNK1A1-202ENST00000377843 ZNF189O75820 626 aaPredicted RBP16.45■□□□□ 0.22
CSNK1A1-202ENST00000377843 FAM13AO94988 1023 aa16.45■□□□□ 0.22
CSNK1A1-202ENST00000377843 SNHG28P0DPA3 235 aa16.45■□□□□ 0.22
CSNK1A1-202ENST00000377843 CYP3A7P24462 503 aa16.45■□□□□ 0.22
CSNK1A1-202ENST00000377843 ETV4P43268 484 aa16.45■□□□□ 0.22
CSNK1A1-202ENST00000377843 MMEL1Q495T6 779 aa16.45■□□□□ 0.22
CSNK1A1-202ENST00000377843 ASPRV1Q53RT3 343 aa16.45■□□□□ 0.22
CSNK1A1-202ENST00000377843 PAOXQ6QHF9 649 aa16.45■□□□□ 0.22
CSNK1A1-202ENST00000377843 MAP7D3Q8IWC1 876 aa16.45■□□□□ 0.22
CSNK1A1-202ENST00000377843 GDPD5Q8WTR4 605 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms