RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 VWA5AO00534 786 aa14.6□□□□□ -0.07
SF1-205ENST00000377394 ZBED4O75132 1171 aa14.6□□□□□ -0.07
SF1-205ENST00000377394 T-ENOLP0DO92 83 aa14.6□□□□□ -0.07
SF1-205ENST00000377394 CCND2P30279 289 aa14.6□□□□□ -0.07
SF1-205ENST00000377394 SERPINB4P48594 390 aa14.6□□□□□ -0.07
SF1-205ENST00000377394 CACNA2D1P54289 1103 aa14.6□□□□□ -0.07
SF1-205ENST00000377394 KHDC1Q4VXA5 237 aaKnown RBP14.6□□□□□ -0.07
SF1-205ENST00000377394 TMEM63BQ5T3F8 832 aa14.6□□□□□ -0.07
SF1-205ENST00000377394 PLEKHA7Q6IQ23 1121 aa14.6□□□□□ -0.07
SF1-205ENST00000377394 APBB1IPQ7Z5R6 666 aaPredicted RBP14.6□□□□□ -0.07
SF1-205ENST00000377394 PRUNE1Q86TP1 453 aa14.6□□□□□ -0.07
SF1-205ENST00000377394 PASD1Q8IV76 773 aa14.6□□□□□ -0.07
SF1-205ENST00000377394 ABRAQ8N0Z2 381 aa14.6□□□□□ -0.07
SF1-205ENST00000377394 CCDC89Q8N998 374 aa14.6□□□□□ -0.07
SF1-205ENST00000377394 NRG4Q8WWG1 115 aa14.6□□□□□ -0.07
SF1-205ENST00000377394 TEPSINQ96N21 525 aa14.6□□□□□ -0.07
SF1-205ENST00000377394 HAPLN2Q9GZV7 340 aa14.6□□□□□ -0.07
SF1-205ENST00000377394 POLR3FQ9H1D9 316 aaPredicted RBP14.6□□□□□ -0.07
SF1-205ENST00000377394 RPAP3Q9H6T3 665 aaPredicted RBP14.6□□□□□ -0.07
SF1-205ENST00000377394 KIAA1586Q9HCI6 787 aa14.6□□□□□ -0.07
SF1-205ENST00000377394 CYP26B1Q9NR63 512 aa14.6□□□□□ -0.07
SF1-205ENST00000377394 SCOCQ9UIL1 159 aa14.6□□□□□ -0.07
SF1-205ENST00000377394 ARID2Q68CP9 1835 aa14.6□□□□□ -0.07
SF1-205ENST00000377394 FER1L6Q2WGJ9 1857 aa14.6□□□□□ -0.07
SF1-205ENST00000377394 SIGLEC16A6NMB1 481 aa14.59□□□□□ -0.07
SF1-205ENST00000377394 TNNI1P19237 187 aa14.59□□□□□ -0.07
SF1-205ENST00000377394 CMPK2Q5EBM0 449 aa14.59□□□□□ -0.07
SF1-205ENST00000377394 LIN9Q5TKA1 542 aa14.59□□□□□ -0.07
SF1-205ENST00000377394 IZUMO3Q5VZ72 239 aa14.59□□□□□ -0.07
SF1-205ENST00000377394 IRGCQ6NXR0 463 aa14.59□□□□□ -0.07
SF1-205ENST00000377394 CCDC60Q8IWA6 550 aaPredicted RBP14.59□□□□□ -0.07
SF1-205ENST00000377394 PAIP2Q9BPZ3 127 aaKnown RBP14.59□□□□□ -0.07
SF1-205ENST00000377394 SEPT9Q9UHD8 586 aaPredicted RBP14.59□□□□□ -0.07
SF1-205ENST00000377394 STYXL1Q9Y6J8 313 aa14.59□□□□□ -0.07
SF1-205ENST00000377394 MAFGO15525 162 aa14.59□□□□□ -0.07
SF1-205ENST00000377394 FAM163BP0C2L3 166 aa14.59□□□□□ -0.07
SF1-205ENST00000377394 TAC1P20366 129 aa14.59□□□□□ -0.07
SF1-205ENST00000377394 KCNA3P22001 575 aa14.59□□□□□ -0.07
SF1-205ENST00000377394 SSTR3P32745 418 aaPredicted RBP14.59□□□□□ -0.07
SF1-205ENST00000377394 PIK3CAP42336 1068 aa14.59□□□□□ -0.07
SF1-205ENST00000377394 ACOT2P49753 483 aa14.59□□□□□ -0.07
SF1-205ENST00000377394 LIG4P49917 911 aa14.59□□□□□ -0.07
SF1-205ENST00000377394 MTMR2Q13614 643 aa14.59□□□□□ -0.07
SF1-205ENST00000377394 CUL2Q13617 745 aa14.59□□□□□ -0.07
SF1-205ENST00000377394 MTFR1Q15390 333 aa14.59□□□□□ -0.07
SF1-205ENST00000377394 ZNF365Q70YC5 407 aa14.59□□□□□ -0.07
SF1-205ENST00000377394 ZC3H18Q86VM9 953 aaKnown RBP14.59□□□□□ -0.07
SF1-205ENST00000377394 PHF13Q86YI8 300 aaPredicted RBP14.59□□□□□ -0.07
SF1-205ENST00000377394 AGGF1Q8N302 714 aaeCLIP14.59□□□□□ -0.07
SF1-205ENST00000377394 BBOF1Q8ND07 529 aa14.59□□□□□ -0.07
SF1-205ENST00000377394 EXD1Q8NHP7 514 aa14.59□□□□□ -0.07
SF1-205ENST00000377394 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.59□□□□□ -0.07
SF1-205ENST00000377394 ATG4CQ96DT6 458 aa14.59□□□□□ -0.07
SF1-205ENST00000377394 C9orf72Q96LT7 481 aa14.59□□□□□ -0.07
SF1-205ENST00000377394 FNBP1Q96RU3 617 aa14.59□□□□□ -0.07
SF1-205ENST00000377394 RNF146Q9NTX7 359 aa14.59□□□□□ -0.07
SF1-205ENST00000377394 ZNF541Q9H0D2 1346 aa14.59□□□□□ -0.07
SF1-205ENST00000377394 CDH16O75309 829 aa14.59□□□□□ -0.07
SF1-205ENST00000377394 PSAPP07602 524 aa14.59□□□□□ -0.07
SF1-205ENST00000377394 CD58P19256 250 aa14.59□□□□□ -0.07
SF1-205ENST00000377394 PRKCEQ02156 737 aa14.59□□□□□ -0.07
SF1-205ENST00000377394 TRIM72Q6ZMU5 477 aa14.59□□□□□ -0.07
SF1-205ENST00000377394 VCPIP1Q96JH7 1222 aa14.59□□□□□ -0.07
SF1-205ENST00000377394 PITPNM3Q9BZ71 974 aa14.59□□□□□ -0.07
SF1-205ENST00000377394 PICK1Q9NRD5 415 aa14.59□□□□□ -0.07
SF1-205ENST00000377394 CTDP1Q9Y5B0 961 aaPredicted RBP14.59□□□□□ -0.07
SF1-205ENST00000377394 GSTT1P30711 240 aa14.58□□□□□ -0.08
SF1-205ENST00000377394 STAT4Q14765 748 aa14.58□□□□□ -0.08
SF1-205ENST00000377394 TMEM270Q6UE05 265 aa14.58□□□□□ -0.08
SF1-205ENST00000377394 TTLL6Q8N841 843 aa14.58□□□□□ -0.08
SF1-205ENST00000377394 LRRC8CQ8TDW0 803 aa14.58□□□□□ -0.08
SF1-205ENST00000377394 NDNQ99608 321 aa14.58□□□□□ -0.08
SF1-205ENST00000377394 MRPL47Q9HD33 250 aaKnown RBP14.58□□□□□ -0.08
SF1-205ENST00000377394 AGO2Q9UKV8 859 aaKnown RBP14.58□□□□□ -0.08
SF1-205ENST00000377394 ZNRF3Q9ULT6 936 aa14.58□□□□□ -0.08
SF1-205ENST00000377394 CNTN6Q9UQ52 1028 aa14.58□□□□□ -0.08
SF1-205ENST00000377394 PCDHB4Q9Y5E5 795 aa14.58□□□□□ -0.08
SF1-205ENST00000377394 TLR3O15455 904 aaKnown RBP14.58□□□□□ -0.08
SF1-205ENST00000377394 DKC1O60832 514 aaKnown RBP eCLIP14.58□□□□□ -0.08
SF1-205ENST00000377394 GNA15P30679 374 aa14.58□□□□□ -0.08
SF1-205ENST00000377394 ABHD15Q6UXT9 468 aa14.58□□□□□ -0.08
SF1-205ENST00000377394 APLFQ8IW19 511 aaPredicted RBP14.58□□□□□ -0.08
SF1-205ENST00000377394 SRRM1Q8IYB3 904 aaKnown RBP14.58□□□□□ -0.08
SF1-205ENST00000377394 ZCCHC9Q8N567 271 aaKnown RBP14.58□□□□□ -0.08
SF1-205ENST00000377394 SCG3Q8WXD2 468 aaKnown RBP14.58□□□□□ -0.08
SF1-205ENST00000377394 MAML1Q92585 1016 aa14.58□□□□□ -0.08
SF1-205ENST00000377394 MAGEB18Q96M61 343 aa14.58□□□□□ -0.08
SF1-205ENST00000377394 JPH1Q9HDC5 661 aaPredicted RBP14.58□□□□□ -0.08
SF1-205ENST00000377394 SLCO1B3Q9NPD5 702 aa14.58□□□□□ -0.08
SF1-205ENST00000377394 USTQ9Y2C2 406 aa14.58□□□□□ -0.08
SF1-205ENST00000377394 ACTL7BQ9Y614 415 aa14.58□□□□□ -0.08
SF1-205ENST00000377394 NFASCO94856 1347 aa14.57□□□□□ -0.08
SF1-205ENST00000377394 TTC36A6NLP5 189 aa14.57□□□□□ -0.08
SF1-205ENST00000377394 UBTFL6P0CB48 400 aaPredicted RBP14.57□□□□□ -0.08
SF1-205ENST00000377394 POLGP54098 1239 aaPredicted RBP14.57□□□□□ -0.08
SF1-205ENST00000377394 SP4Q02446 784 aa14.57□□□□□ -0.08
SF1-205ENST00000377394 P3H1Q32P28 736 aa14.57□□□□□ -0.08
SF1-205ENST00000377394 ATP13A4Q4VNC1 1196 aa14.57□□□□□ -0.08
SF1-205ENST00000377394 ZBTB41Q5SVQ8 909 aa14.57□□□□□ -0.08
SF1-205ENST00000377394 SNX30Q5VWJ9 437 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms