RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 ACOT1Q86TX2 421 aa18.71■□□□□ 0.59
CLSTN1-202ENST00000377298 SH3KBP1Q96B97 665 aa18.71■□□□□ 0.59
CLSTN1-202ENST00000377298 GRAMD1AQ96CP6 724 aa18.71■□□□□ 0.59
CLSTN1-202ENST00000377298 FRMD8Q9BZ67 464 aaPredicted RBP18.71■□□□□ 0.59
CLSTN1-202ENST00000377298 MRPL40Q9NQ50 206 aaKnown RBP18.71■□□□□ 0.59
CLSTN1-202ENST00000377298 ZFP69BQ9UJL9 534 aa18.71■□□□□ 0.59
CLSTN1-202ENST00000377298 SLC30A1Q9Y6M5 507 aa18.71■□□□□ 0.59
CLSTN1-202ENST00000377298 A0A087X0T9 212 aa18.71■□□□□ 0.59
CLSTN1-202ENST00000377298 FAM228BP0C875 321 aa18.71■□□□□ 0.59
CLSTN1-202ENST00000377298 SH3BGRP55822 239 aaPredicted RBP18.71■□□□□ 0.59
CLSTN1-202ENST00000377298 SMTNL2Q2TAL5 461 aa18.71■□□□□ 0.59
CLSTN1-202ENST00000377298 HABP4Q5JVS0 413 aaKnown RBP18.71■□□□□ 0.59
CLSTN1-202ENST00000377298 ADGRF2Q8IZF7 708 aa18.71■□□□□ 0.59
CLSTN1-202ENST00000377298 ZNF507Q8TCN5 953 aa18.71■□□□□ 0.59
CLSTN1-202ENST00000377298 PBXIP1Q96AQ6 731 aa18.71■□□□□ 0.59
CLSTN1-202ENST00000377298 DDX27Q96GQ7 796 aaKnown RBP18.71■□□□□ 0.59
CLSTN1-202ENST00000377298 BTBD6Q96KE9 485 aa18.71■□□□□ 0.59
CLSTN1-202ENST00000377298 OSMRQ99650 979 aa18.71■□□□□ 0.59
CLSTN1-202ENST00000377298 A1CFQ9NQ94 594 aaKnown RBP18.71■□□□□ 0.59
CLSTN1-202ENST00000377298 SMG5Q9UPR3 1016 aaKnown RBP18.71■□□□□ 0.59
CLSTN1-202ENST00000377298 CCDC195A0A1B0GUA6 201 aa18.7■□□□□ 0.58
CLSTN1-202ENST00000377298 IRF1P10914 325 aa18.7■□□□□ 0.58
CLSTN1-202ENST00000377298 LHX1P48742 406 aa18.7■□□□□ 0.58
CLSTN1-202ENST00000377298 BCAT1P54687 386 aa18.7■□□□□ 0.58
CLSTN1-202ENST00000377298 VGLL4Q14135 290 aa18.7■□□□□ 0.58
CLSTN1-202ENST00000377298 RNF217Q8TC41 542 aa18.7■□□□□ 0.58
CLSTN1-202ENST00000377298 CPB2Q96IY4 423 aa18.7■□□□□ 0.58
CLSTN1-202ENST00000377298 DDIT4Q9NX09 232 aa18.7■□□□□ 0.58
CLSTN1-202ENST00000377298 TBC1D12O60347 775 aa18.7■□□□□ 0.58
CLSTN1-202ENST00000377298 ANGPTL8Q6UXH0 198 aa18.7■□□□□ 0.58
CLSTN1-202ENST00000377298 TAS1R2Q8TE23 839 aa18.7■□□□□ 0.58
CLSTN1-202ENST00000377298 TRABDQ9H4I3 376 aa18.7■□□□□ 0.58
CLSTN1-202ENST00000377298 NSMCE4AQ9NXX6 385 aa18.7■□□□□ 0.58
CLSTN1-202ENST00000377298 AK9Q5TCS8 1911 aa18.7■□□□□ 0.58
CLSTN1-202ENST00000377298 GYG2O15488 501 aa18.7■□□□□ 0.58
CLSTN1-202ENST00000377298 HAUS5O94927 633 aa18.7■□□□□ 0.58
CLSTN1-202ENST00000377298 YY1P25490 414 aa18.7■□□□□ 0.58
CLSTN1-202ENST00000377298 HSPA9P38646 679 aaKnown RBP18.7■□□□□ 0.58
CLSTN1-202ENST00000377298 RAB27AP51159 221 aa18.7■□□□□ 0.58
CLSTN1-202ENST00000377298 LRIG3Q6UXM1 1119 aa18.7■□□□□ 0.58
CLSTN1-202ENST00000377298 PGBD3Q8N328 593 aa18.7■□□□□ 0.58
CLSTN1-202ENST00000377298 CALML6Q8TD86 181 aa18.7■□□□□ 0.58
CLSTN1-202ENST00000377298 TSSK1BQ9BXA7 367 aa18.7■□□□□ 0.58
CLSTN1-202ENST00000377298 RIC1Q4ADV7 1423 aa18.7■□□□□ 0.58
CLSTN1-202ENST00000377298 M0QYT0 321 aa18.7■□□□□ 0.58
CLSTN1-202ENST00000377298 CYTH3O43739 400 aa18.7■□□□□ 0.58
CLSTN1-202ENST00000377298 DIAPH2O60879 1101 aa18.7■□□□□ 0.58
CLSTN1-202ENST00000377298 RPSAP08865 295 aaKnown RBP18.7■□□□□ 0.58
CLSTN1-202ENST00000377298 AMHR2Q16671 573 aa18.7■□□□□ 0.58
CLSTN1-202ENST00000377298 CDKAL1Q5VV42 579 aa18.7■□□□□ 0.58
CLSTN1-202ENST00000377298 RAB42Q8N4Z0 105 aa18.7■□□□□ 0.58
CLSTN1-202ENST00000377298 FHDC1Q9C0D6 1143 aaPredicted RBP18.7■□□□□ 0.58
CLSTN1-202ENST00000377298 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.7■□□□□ 0.58
CLSTN1-202ENST00000377298 L3MBTL1Q9Y468 752 aa18.7■□□□□ 0.58
CLSTN1-202ENST00000377298 NPM3O75607 178 aaKnown RBP18.69■□□□□ 0.58
CLSTN1-202ENST00000377298 EGFRP00533 1210 aa18.69■□□□□ 0.58
CLSTN1-202ENST00000377298 KITP10721 976 aa18.69■□□□□ 0.58
CLSTN1-202ENST00000377298 TAL1P17542 331 aaPredicted RBP18.69■□□□□ 0.58
CLSTN1-202ENST00000377298 EPHB2P29323 1055 aa18.69■□□□□ 0.58
CLSTN1-202ENST00000377298 IFNA8P32881 189 aa18.69■□□□□ 0.58
CLSTN1-202ENST00000377298 EARS2Q5JPH6 523 aaKnown RBP18.69■□□□□ 0.58
CLSTN1-202ENST00000377298 CERS5Q8N5B7 392 aa18.69■□□□□ 0.58
CLSTN1-202ENST00000377298 PNMA5Q96PV4 448 aa18.69■□□□□ 0.58
CLSTN1-202ENST00000377298 FRMD8P1Q9BZ68 369 aaPredicted RBP18.69■□□□□ 0.58
CLSTN1-202ENST00000377298 WDCPQ9H6R7 721 aa18.69■□□□□ 0.58
CLSTN1-202ENST00000377298 VIPAS39Q9H9C1 493 aa18.69■□□□□ 0.58
CLSTN1-202ENST00000377298 SLC11A2P49281 568 aa18.69■□□□□ 0.58
CLSTN1-202ENST00000377298 CCNI2Q6ZMN8 369 aaPredicted RBP18.69■□□□□ 0.58
CLSTN1-202ENST00000377298 SV2AQ7L0J3 742 aa18.69■□□□□ 0.58
CLSTN1-202ENST00000377298 CCDC124Q96CT7 223 aaKnown RBP18.69■□□□□ 0.58
CLSTN1-202ENST00000377298 TRAF3IP3Q9Y228 551 aa18.69■□□□□ 0.58
CLSTN1-202ENST00000377298 LSM8O95777 96 aaKnown RBP18.69■□□□□ 0.58
CLSTN1-202ENST00000377298 STIP1P31948 543 aaKnown RBP18.69■□□□□ 0.58
CLSTN1-202ENST00000377298 INHBEP58166 350 aa18.69■□□□□ 0.58
CLSTN1-202ENST00000377298 RPL10AP62906 217 aaKnown RBP18.69■□□□□ 0.58
CLSTN1-202ENST00000377298 SMAD1Q15797 465 aaKnown RBP18.69■□□□□ 0.58
CLSTN1-202ENST00000377298 RIOX2Q8IUF8 465 aa18.69■□□□□ 0.58
CLSTN1-202ENST00000377298 KIRREL3Q8IZU9 778 aa18.69■□□□□ 0.58
CLSTN1-202ENST00000377298 PTPRN2Q92932 1015 aa18.69■□□□□ 0.58
CLSTN1-202ENST00000377298 CYFIP2Q96F07 1278 aa18.69■□□□□ 0.58
CLSTN1-202ENST00000377298 LRRC37BQ96QE4 947 aa18.69■□□□□ 0.58
CLSTN1-202ENST00000377298 ZSWIM1Q9BR11 485 aa18.69■□□□□ 0.58
CLSTN1-202ENST00000377298 ERP44Q9BS26 406 aa18.69■□□□□ 0.58
CLSTN1-202ENST00000377298 EML4Q9HC35 981 aaKnown RBP18.69■□□□□ 0.58
CLSTN1-202ENST00000377298 AFF4Q9UHB7 1163 aaKnown RBP18.69■□□□□ 0.58
CLSTN1-202ENST00000377298 ITGA11Q9UKX5 1188 aa18.69■□□□□ 0.58
CLSTN1-202ENST00000377298 MYO1DO94832 1006 aa18.69■□□□□ 0.58
CLSTN1-202ENST00000377298 ELAVL2Q12926 359 aaKnown RBP18.69■□□□□ 0.58
CLSTN1-202ENST00000377298 GTF2H3Q13889 308 aa18.69■□□□□ 0.58
CLSTN1-202ENST00000377298 IQSEC1Q6DN90 963 aa18.69■□□□□ 0.58
CLSTN1-202ENST00000377298 CATSPERGQ6ZRH7 1159 aa18.69■□□□□ 0.58
CLSTN1-202ENST00000377298 FAM129AQ9BZQ8 928 aa18.69■□□□□ 0.58
CLSTN1-202ENST00000377298 SPAG7O75391 227 aa18.68■□□□□ 0.58
CLSTN1-202ENST00000377298 FBXO21O94952 628 aa18.68■□□□□ 0.58
CLSTN1-202ENST00000377298 NAPEPLDQ6IQ20 393 aa18.68■□□□□ 0.58
CLSTN1-202ENST00000377298 ZPBP2Q6X784 338 aa18.68■□□□□ 0.58
CLSTN1-202ENST00000377298 SLC13A5Q86YT5 568 aaPredicted RBP18.68■□□□□ 0.58
CLSTN1-202ENST00000377298 ATXN7L3BQ96GX2 97 aa18.68■□□□□ 0.58
CLSTN1-202ENST00000377298 AIPL1Q9NZN9 384 aa18.68■□□□□ 0.58
CLSTN1-202ENST00000377298 FRMPD4Q14CM0 1322 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms