RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 F5H5T6 163 aa14.23□□□□□ -0.13
GPC6-201ENST00000377047 CST8O60676 142 aa14.23□□□□□ -0.13
GPC6-201ENST00000377047 EGFRP00533 1210 aa14.23□□□□□ -0.13
GPC6-201ENST00000377047 MCF2P10911 925 aa14.23□□□□□ -0.13
GPC6-201ENST00000377047 TROAPQ12815 778 aa14.23□□□□□ -0.13
GPC6-201ENST00000377047 MAPRE2Q15555 327 aa14.23□□□□□ -0.13
GPC6-201ENST00000377047 LY6KQ17RY6 165 aa14.23□□□□□ -0.13
GPC6-201ENST00000377047 TEDDM1Q5T9Z0 273 aa14.23□□□□□ -0.13
GPC6-201ENST00000377047 SHCBP1Q8NEM2 672 aa14.23□□□□□ -0.13
GPC6-201ENST00000377047 CHMP2BQ9UQN3 213 aa14.23□□□□□ -0.13
GPC6-201ENST00000377047 ATP5HO75947 161 aa14.23□□□□□ -0.13
GPC6-201ENST00000377047 CSE1LP55060 971 aaKnown RBP14.23□□□□□ -0.13
GPC6-201ENST00000377047 HERVK_113P62684 666 aa14.23□□□□□ -0.13
GPC6-201ENST00000377047 CCDC157Q569K6 752 aa14.23□□□□□ -0.13
GPC6-201ENST00000377047 STX18Q9P2W9 335 aaKnown RBP14.23□□□□□ -0.13
GPC6-201ENST00000377047 RNF103-CHMP3A0A140T963 221 aa14.23□□□□□ -0.13
GPC6-201ENST00000377047 MANSC4A6NHS7 340 aaPredicted RBP14.23□□□□□ -0.13
GPC6-201ENST00000377047 SREBF1P36956 1147 aa14.23□□□□□ -0.13
GPC6-201ENST00000377047 CUL3Q13618 768 aa14.23□□□□□ -0.13
GPC6-201ENST00000377047 TRIM48Q8IWZ4 208 aa14.23□□□□□ -0.13
GPC6-201ENST00000377047 CD302Q8IX05 232 aa14.23□□□□□ -0.13
GPC6-201ENST00000377047 CARNMT1Q8N4J0 409 aa14.23□□□□□ -0.13
GPC6-201ENST00000377047 NAF1Q96HR8 494 aaKnown RBP14.23□□□□□ -0.13
GPC6-201ENST00000377047 SELENONQ9NZV5 590 aa14.23□□□□□ -0.13
GPC6-201ENST00000377047 TRIM10Q9UDY6 481 aa14.23□□□□□ -0.13
GPC6-201ENST00000377047 AGLP35573 1532 aa14.23□□□□□ -0.13
GPC6-201ENST00000377047 ASS1P00966 412 aaKnown RBP14.23□□□□□ -0.13
GPC6-201ENST00000377047 CKMP06732 381 aa14.23□□□□□ -0.13
GPC6-201ENST00000377047 THP07101 528 aa14.23□□□□□ -0.13
GPC6-201ENST00000377047 SLC2A3P11169 496 aa14.23□□□□□ -0.13
GPC6-201ENST00000377047 PEX19P40855 299 aa14.23□□□□□ -0.13
GPC6-201ENST00000377047 RGS4P49798 205 aa14.23□□□□□ -0.13
GPC6-201ENST00000377047 GRB10Q13322 594 aa14.23□□□□□ -0.13
GPC6-201ENST00000377047 OTUB1Q96FW1 271 aaPredicted RBP14.23□□□□□ -0.13
GPC6-201ENST00000377047 SPATA16Q9BXB7 569 aa14.23□□□□□ -0.13
GPC6-201ENST00000377047 INO80Q9ULG1 1556 aaPredicted RBP14.23□□□□□ -0.13
GPC6-201ENST00000377047 DDHD2O94830 711 aa14.23□□□□□ -0.13
GPC6-201ENST00000377047 MUTP22033 750 aa14.23□□□□□ -0.13
GPC6-201ENST00000377047 RAP1GAPP47736 663 aa14.23□□□□□ -0.13
GPC6-201ENST00000377047 GRIN1Q05586 938 aa14.23□□□□□ -0.13
GPC6-201ENST00000377047 KRT72Q14CN4 511 aa14.23□□□□□ -0.13
GPC6-201ENST00000377047 ATP6V1G3Q96LB4 118 aa14.23□□□□□ -0.13
GPC6-201ENST00000377047 AGO4Q9HCK5 861 aaKnown RBP14.23□□□□□ -0.13
GPC6-201ENST00000377047 SETD4Q9NVD3 440 aa14.23□□□□□ -0.13
GPC6-201ENST00000377047 CRLS1Q9UJA2 301 aa14.23□□□□□ -0.13
GPC6-201ENST00000377047 GMNCA6NCL1 334 aa14.22□□□□□ -0.13
GPC6-201ENST00000377047 C5orf58C9J3I9 102 aa14.22□□□□□ -0.13
GPC6-201ENST00000377047 CHRM3P20309 590 aa14.22□□□□□ -0.13
GPC6-201ENST00000377047 NUMBP49757 651 aa14.22□□□□□ -0.13
GPC6-201ENST00000377047 FXR1P51114 621 aaKnown RBP eCLIP14.22□□□□□ -0.13
GPC6-201ENST00000377047 NR1I3Q14994 352 aa14.22□□□□□ -0.13
GPC6-201ENST00000377047 POLD3Q15054 466 aaPredicted RBP14.22□□□□□ -0.13
GPC6-201ENST00000377047 FAM161BQ96MY7 647 aa14.22□□□□□ -0.13
GPC6-201ENST00000377047 OSMRQ99650 979 aa14.22□□□□□ -0.13
GPC6-201ENST00000377047 PCMTD2Q9NV79 361 aa14.22□□□□□ -0.13
GPC6-201ENST00000377047 ADGRA2Q96PE1 1338 aa14.22□□□□□ -0.13
GPC6-201ENST00000377047 KPNA6O60684 536 aa14.22□□□□□ -0.13
GPC6-201ENST00000377047 TAL1P17542 331 aaPredicted RBP14.22□□□□□ -0.13
GPC6-201ENST00000377047 NPTX2P47972 431 aa14.22□□□□□ -0.13
GPC6-201ENST00000377047 CALML6Q8TD86 181 aa14.22□□□□□ -0.13
GPC6-201ENST00000377047 CASTOR2A6NHX0 329 aa14.22□□□□□ -0.13
GPC6-201ENST00000377047 NKRFO15226 690 aaKnown RBP eCLIP14.22□□□□□ -0.13
GPC6-201ENST00000377047 ALDH18A1P54886 795 aaKnown RBP14.22□□□□□ -0.13
GPC6-201ENST00000377047 ZNF200P98182 395 aaPredicted RBP14.22□□□□□ -0.13
GPC6-201ENST00000377047 TFB1MQ8WVM0 346 aaKnown RBP14.22□□□□□ -0.13
GPC6-201ENST00000377047 WDR24Q96S15 920 aa14.22□□□□□ -0.13
GPC6-201ENST00000377047 ANGPT2O15123 496 aa14.22□□□□□ -0.13
GPC6-201ENST00000377047 POLBP06746 335 aa14.22□□□□□ -0.13
GPC6-201ENST00000377047 IL1R1P14778 569 aa14.22□□□□□ -0.13
GPC6-201ENST00000377047 ITIH2P19823 946 aa14.22□□□□□ -0.13
GPC6-201ENST00000377047 ZC3H12BQ5HYM0 836 aaKnown RBP14.22□□□□□ -0.13
GPC6-201ENST00000377047 PCDHB12Q9Y5F1 795 aa14.22□□□□□ -0.13
GPC6-201ENST00000377047 HSPA9P38646 679 aaKnown RBP14.22□□□□□ -0.13
GPC6-201ENST00000377047 MTM1Q13496 603 aa14.22□□□□□ -0.13
GPC6-201ENST00000377047 TRADDQ15628 312 aa14.22□□□□□ -0.13
GPC6-201ENST00000377047 FAM71DQ8N9W8 422 aa14.22□□□□□ -0.13
GPC6-201ENST00000377047 ZCWPW1Q9H0M4 648 aa14.22□□□□□ -0.13
GPC6-201ENST00000377047 A0A087WZ62 844 aa14.22□□□□□ -0.13
GPC6-201ENST00000377047 ARIH2O95376 493 aa14.22□□□□□ -0.13
GPC6-201ENST00000377047 CBWD2Q8IUF1 395 aa14.22□□□□□ -0.13
GPC6-201ENST00000377047 FDXACB1Q9BRP7 624 aaPredicted RBP14.22□□□□□ -0.13
GPC6-201ENST00000377047 TNS2Q63HR2 1409 aa14.21□□□□□ -0.13
GPC6-201ENST00000377047 TMEM253P0C7T8 217 aa14.21□□□□□ -0.13
GPC6-201ENST00000377047 CASP4P49662 377 aa14.21□□□□□ -0.13
GPC6-201ENST00000377047 MAP3K7CLP57077 242 aa14.21□□□□□ -0.13
GPC6-201ENST00000377047 LONRF1Q17RB8 773 aa14.21□□□□□ -0.13
GPC6-201ENST00000377047 MDH1BQ5I0G3 518 aa14.21□□□□□ -0.13
GPC6-201ENST00000377047 MTG1Q9BT17 334 aaPredicted RBP14.21□□□□□ -0.13
GPC6-201ENST00000377047 FOXP2O15409 715 aa14.21□□□□□ -0.13
GPC6-201ENST00000377047 CCDC22O60826 627 aa14.21□□□□□ -0.13
GPC6-201ENST00000377047 CYP2C8P10632 490 aa14.21□□□□□ -0.13
GPC6-201ENST00000377047 DSG3P32926 999 aa14.21□□□□□ -0.13
GPC6-201ENST00000377047 EPHB3P54753 998 aa14.21□□□□□ -0.13
GPC6-201ENST00000377047 C11orf96Q7Z7L8 435 aa14.21□□□□□ -0.13
GPC6-201ENST00000377047 UCMAQ8WVF2 138 aa14.21□□□□□ -0.13
GPC6-201ENST00000377047 C9orf72Q96LT7 481 aa14.21□□□□□ -0.13
GPC6-201ENST00000377047 CCDC90BQ9GZT6 254 aa14.21□□□□□ -0.13
GPC6-201ENST00000377047 NCOA3Q9Y6Q9 1424 aa14.21□□□□□ -0.13
GPC6-201ENST00000377047 PMPCBO75439 489 aa14.21□□□□□ -0.13
GPC6-201ENST00000377047 RHOBTB1O94844 696 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms