RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 CLASP2O75122 1294 aaKnown RBP13.26□□□□□ -0.29
VRK3-202ENST00000377011 PRPF6O94906 941 aaKnown RBP13.26□□□□□ -0.29
VRK3-202ENST00000377011 PIGRP01833 764 aa13.26□□□□□ -0.29
VRK3-202ENST00000377011 CTSAP10619 480 aa13.26□□□□□ -0.29
VRK3-202ENST00000377011 ANXA13P27216 316 aa13.26□□□□□ -0.29
VRK3-202ENST00000377011 CA8P35219 290 aa13.26□□□□□ -0.29
VRK3-202ENST00000377011 CLCNKBP51801 687 aa13.26□□□□□ -0.29
VRK3-202ENST00000377011 KRT17Q04695 432 aa13.26□□□□□ -0.29
VRK3-202ENST00000377011 CCDC40Q4G0X9 1142 aa13.26□□□□□ -0.29
VRK3-202ENST00000377011 HERC4Q5GLZ8 1057 aaPredicted RBP13.26□□□□□ -0.29
VRK3-202ENST00000377011 C10orf76Q5T2E6 689 aa13.26□□□□□ -0.29
VRK3-202ENST00000377011 SFMBT2Q5VUG0 894 aa13.26□□□□□ -0.29
VRK3-202ENST00000377011 HGSNATQ68CP4 663 aa13.26□□□□□ -0.29
VRK3-202ENST00000377011 ZPBP2Q6X784 338 aa13.26□□□□□ -0.29
VRK3-202ENST00000377011 MAP4K3Q8IVH8 894 aa13.26□□□□□ -0.29
VRK3-202ENST00000377011 EFHBQ8N7U6 833 aa13.26□□□□□ -0.29
VRK3-202ENST00000377011 AENQ8WTP8 325 aaKnown RBP13.26□□□□□ -0.29
VRK3-202ENST00000377011 BICD1Q96G01 975 aa13.26□□□□□ -0.29
VRK3-202ENST00000377011 MSLNLQ96KJ4 702 aa13.26□□□□□ -0.29
VRK3-202ENST00000377011 CAPZA3Q96KX2 299 aa13.26□□□□□ -0.29
VRK3-202ENST00000377011 RPS6KC1Q96S38 1066 aa13.26□□□□□ -0.29
VRK3-202ENST00000377011 OSBPL9Q96SU4 736 aa13.26□□□□□ -0.29
VRK3-202ENST00000377011 CRACR2AQ9BSW2 395 aa13.26□□□□□ -0.29
VRK3-202ENST00000377011 TUBGCP4Q9UGJ1 667 aa13.26□□□□□ -0.29
VRK3-202ENST00000377011 COG5Q9UP83 839 aa13.26□□□□□ -0.29
VRK3-202ENST00000377011 CAPN6Q9Y6Q1 641 aa13.26□□□□□ -0.29
VRK3-202ENST00000377011 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.25□□□□□ -0.29
VRK3-202ENST00000377011 BTNL10A8MVZ5 291 aa13.25□□□□□ -0.29
VRK3-202ENST00000377011 DLL1O00548 723 aa13.25□□□□□ -0.29
VRK3-202ENST00000377011 HNRNPDLO14979 420 aaKnown RBP13.25□□□□□ -0.29
VRK3-202ENST00000377011 THP07101 528 aa13.25□□□□□ -0.29
VRK3-202ENST00000377011 PLEKP08567 350 aaPredicted RBP13.25□□□□□ -0.29
VRK3-202ENST00000377011 EPCAMP16422 314 aa13.25□□□□□ -0.29
VRK3-202ENST00000377011 RPL17P18621 184 aaKnown RBP13.25□□□□□ -0.29
VRK3-202ENST00000377011 PAFAH1B1P43034 410 aa13.25□□□□□ -0.29
VRK3-202ENST00000377011 TNNT3P45378 269 aaPredicted RBP13.25□□□□□ -0.29
VRK3-202ENST00000377011 KCNMA1Q12791 1236 aa13.25□□□□□ -0.29
VRK3-202ENST00000377011 NNTQ13423 1086 aa13.25□□□□□ -0.29
VRK3-202ENST00000377011 TUSC3Q13454 348 aa13.25□□□□□ -0.29
VRK3-202ENST00000377011 ENOX2Q16206 610 aaKnown RBP13.25□□□□□ -0.29
VRK3-202ENST00000377011 LEXMQ3ZCV2 418 aa13.25□□□□□ -0.29
VRK3-202ENST00000377011 RTP2Q5QGT7 225 aa13.25□□□□□ -0.29
VRK3-202ENST00000377011 SPATA4Q8NEY3 305 aa13.25□□□□□ -0.29
VRK3-202ENST00000377011 ADAMTS19Q8TE59 1207 aa13.25□□□□□ -0.29
VRK3-202ENST00000377011 KHSRPQ92945 711 aaKnown RBP eCLIP13.25□□□□□ -0.29
VRK3-202ENST00000377011 TFR2Q9UP52 801 aa13.25□□□□□ -0.29
VRK3-202ENST00000377011 HCFC2Q9Y5Z7 792 aa13.25□□□□□ -0.29
VRK3-202ENST00000377011 DUSP10Q9Y6W6 482 aa13.25□□□□□ -0.29
VRK3-202ENST00000377011 ZMYM2Q9UBW7 1377 aa13.25□□□□□ -0.29
VRK3-202ENST00000377011 A0A0B4J269 797 aa13.25□□□□□ -0.29
VRK3-202ENST00000377011 GRID2IPA4D2P6 1211 aa13.25□□□□□ -0.29
VRK3-202ENST00000377011 PPEF2O14830 753 aa13.25□□□□□ -0.29
VRK3-202ENST00000377011 CLDN3O15551 220 aa13.25□□□□□ -0.29
VRK3-202ENST00000377011 SYF2O95926 243 aaKnown RBP13.25□□□□□ -0.29
VRK3-202ENST00000377011 CNPP09543 421 aaKnown RBP13.25□□□□□ -0.29
VRK3-202ENST00000377011 BRCC3P46736 316 aa13.25□□□□□ -0.29
VRK3-202ENST00000377011 ACOT2P49753 483 aa13.25□□□□□ -0.29
VRK3-202ENST00000377011 LIG4P49917 911 aa13.25□□□□□ -0.29
VRK3-202ENST00000377011 KIAA0319Q5VV43 1072 aa13.25□□□□□ -0.29
VRK3-202ENST00000377011 EMBQ6PCB8 327 aa13.25□□□□□ -0.29
VRK3-202ENST00000377011 SYCE2Q6PIF2 218 aa13.25□□□□□ -0.29
VRK3-202ENST00000377011 PRSS55Q6UWB4 352 aaPredicted RBP13.25□□□□□ -0.29
VRK3-202ENST00000377011 CRELD2Q6UXH1 353 aaPredicted RBP13.25□□□□□ -0.29
VRK3-202ENST00000377011 HACE1Q8IYU2 909 aa13.25□□□□□ -0.29
VRK3-202ENST00000377011 C12orf76Q8N812 135 aaPredicted RBP13.25□□□□□ -0.29
VRK3-202ENST00000377011 EEF2KMTQ96G04 330 aa13.25□□□□□ -0.29
VRK3-202ENST00000377011 ACAP3Q96P50 834 aa13.25□□□□□ -0.29
VRK3-202ENST00000377011 SELENOOQ9BVL4 669 aa13.25□□□□□ -0.29
VRK3-202ENST00000377011 KCTD10Q9H3F6 313 aa13.25□□□□□ -0.29
VRK3-202ENST00000377011 ST6GALNAC4Q9H4F1 302 aa13.25□□□□□ -0.29
VRK3-202ENST00000377011 AIPL1Q9NZN9 384 aa13.25□□□□□ -0.29
VRK3-202ENST00000377011 DOCK6Q96HP0 2047 aa13.24□□□□□ -0.29
VRK3-202ENST00000377011 LACTBL1A8MY62 500 aa13.24□□□□□ -0.29
VRK3-202ENST00000377011 CES2O00748 559 aa13.24□□□□□ -0.29
VRK3-202ENST00000377011 ADAM12O43184 909 aa13.24□□□□□ -0.29
VRK3-202ENST00000377011 N4BP1O75113 896 aaKnown RBP13.24□□□□□ -0.29
VRK3-202ENST00000377011 RNF40O75150 1001 aa13.24□□□□□ -0.29
VRK3-202ENST00000377011 GCNT3O95395 438 aa13.24□□□□□ -0.29
VRK3-202ENST00000377011 MOCS3O95396 460 aa13.24□□□□□ -0.29
VRK3-202ENST00000377011 SOD2P04179 222 aa13.24□□□□□ -0.29
VRK3-202ENST00000377011 WEE2P0C1S8 567 aa13.24□□□□□ -0.29
VRK3-202ENST00000377011 MATR3P43243 847 aaKnown RBP eCLIP13.24□□□□□ -0.29
VRK3-202ENST00000377011 NDUFV1P49821 464 aa13.24□□□□□ -0.29
VRK3-202ENST00000377011 CCDC181Q5TID7 509 aa13.24□□□□□ -0.29
VRK3-202ENST00000377011 PTCRAQ6ISU1 281 aaPredicted RBP13.24□□□□□ -0.29
VRK3-202ENST00000377011 FUT10Q6P4F1 479 aa13.24□□□□□ -0.29
VRK3-202ENST00000377011 GLYCTKQ8IVS8 523 aa13.24□□□□□ -0.29
VRK3-202ENST00000377011 NGRNQ9NPE2 291 aaKnown RBP13.24□□□□□ -0.29
VRK3-202ENST00000377011 PLCB1Q9NQ66 1216 aa13.24□□□□□ -0.29
VRK3-202ENST00000377011 CNTN3Q9P232 1028 aa13.24□□□□□ -0.29
VRK3-202ENST00000377011 ADAM28Q9UKQ2 775 aa13.24□□□□□ -0.29
VRK3-202ENST00000377011 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.24□□□□□ -0.29
VRK3-202ENST00000377011 BZW2Q9Y6E2 419 aaKnown RBP13.24□□□□□ -0.29
VRK3-202ENST00000377011 CETN3O15182 167 aa13.23□□□□□ -0.29
VRK3-202ENST00000377011 ZNF185O15231 689 aa13.23□□□□□ -0.29
VRK3-202ENST00000377011 MBTPS2O43462 519 aa13.23□□□□□ -0.29
VRK3-202ENST00000377011 NOL4O94818 638 aa13.23□□□□□ -0.29
VRK3-202ENST00000377011 C2orf54Q08AI8 447 aa13.23□□□□□ -0.29
VRK3-202ENST00000377011 SLC18A3Q16572 532 aa13.23□□□□□ -0.29
VRK3-202ENST00000377011 UPP1Q16831 310 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms