RNA–Protein interactions for RNA: ENST00000376836.7

COMMD3-201, Transcript of COMM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-201ENST00000376836 DUSP4Q13115 394 aa29.07■■■□□ 2.24
COMMD3-201ENST00000376836 OTOP3Q7RTS5 596 aa29.07■■■□□ 2.24
COMMD3-201ENST00000376836 FRMD5Q7Z6J6 570 aa29.07■■■□□ 2.24
COMMD3-201ENST00000376836 DUSP9Q99956 384 aaKnown RBP29.07■■■□□ 2.24
COMMD3-201ENST00000376836 USTQ9Y2C2 406 aa29.07■■■□□ 2.24
COMMD3-201ENST00000376836 TTC28Q96AY4 2481 aa29.07■■■□□ 2.24
COMMD3-201ENST00000376836 CLUHO75153 1309 aa29.07■■■□□ 2.24
COMMD3-201ENST00000376836 MTMR11A4FU01 709 aa29.06■■■□□ 2.24
COMMD3-201ENST00000376836 LOC730098B7Z3J9 87 aa29.06■■■□□ 2.24
COMMD3-201ENST00000376836 GABRDO14764 452 aa29.06■■■□□ 2.24
COMMD3-201ENST00000376836 TACC1O75410 805 aa29.06■■■□□ 2.24
COMMD3-201ENST00000376836 HLA-DRAP01903 254 aa29.06■■■□□ 2.24
COMMD3-201ENST00000376836 WARSP23381 471 aaKnown RBP29.06■■■□□ 2.24
COMMD3-201ENST00000376836 GNL1P36915 607 aaPredicted RBP29.06■■■□□ 2.24
COMMD3-201ENST00000376836 TUFMP49411 452 aaKnown RBP29.06■■■□□ 2.24
COMMD3-201ENST00000376836 PPP3CAQ08209 521 aa29.06■■■□□ 2.24
COMMD3-201ENST00000376836 NFE2Q16621 373 aaPredicted RBP29.06■■■□□ 2.24
COMMD3-201ENST00000376836 IQCEQ6IPM2 695 aa29.06■■■□□ 2.24
COMMD3-201ENST00000376836 LIMS2Q7Z4I7 341 aa29.06■■■□□ 2.24
COMMD3-201ENST00000376836 GRASPQ7Z6J2 395 aaPredicted RBP29.06■■■□□ 2.24
COMMD3-201ENST00000376836 TDRD5Q8NAT2 981 aaKnown RBP29.06■■■□□ 2.24
COMMD3-201ENST00000376836 HSFX1Q9UBD0 423 aa29.06■■■□□ 2.24
COMMD3-201ENST00000376836 SP100P23497 879 aaPredicted RBP29.05■■■□□ 2.24
COMMD3-201ENST00000376836 MCCD1P59942 119 aaPredicted RBP29.05■■■□□ 2.24
COMMD3-201ENST00000376836 TWF1Q12792 350 aa29.05■■■□□ 2.24
COMMD3-201ENST00000376836 PLCD3Q8N3E9 789 aa29.05■■■□□ 2.24
COMMD3-201ENST00000376836 ATAD1Q8NBU5 361 aa29.05■■■□□ 2.24
COMMD3-201ENST00000376836 OR6B3Q8NGW1 331 aa29.05■■■□□ 2.24
COMMD3-201ENST00000376836 SPPL2BQ8TCT7 592 aa29.05■■■□□ 2.24
COMMD3-201ENST00000376836 ZNF512Q96ME7 567 aaPredicted RBP29.05■■■□□ 2.24
COMMD3-201ENST00000376836 CDH9Q9ULB4 789 aa29.05■■■□□ 2.24
COMMD3-201ENST00000376836 PCDHB5Q9Y5E4 795 aa29.05■■■□□ 2.24
COMMD3-201ENST00000376836 PTPN2P17706 415 aa29.04■■■□□ 2.24
COMMD3-201ENST00000376836 ACAT1P24752 427 aaKnown RBP29.04■■■□□ 2.24
COMMD3-201ENST00000376836 MXI1P50539 228 aa29.04■■■□□ 2.24
COMMD3-201ENST00000376836 EPHB3P54753 998 aa29.04■■■□□ 2.24
COMMD3-201ENST00000376836 NLRP12P59046 1061 aa29.04■■■□□ 2.24
COMMD3-201ENST00000376836 TPD52L1Q16890 204 aaPredicted RBP29.04■■■□□ 2.24
COMMD3-201ENST00000376836 INTS6LQ5JSJ4 861 aaKnown RBP29.04■■■□□ 2.24
COMMD3-201ENST00000376836 FEZF2Q8TBJ5 459 aa29.04■■■□□ 2.24
COMMD3-201ENST00000376836 SRRTQ9BXP5 876 aaKnown RBP29.04■■■□□ 2.24
COMMD3-201ENST00000376836 SLC27A5Q9Y2P5 690 aa29.04■■■□□ 2.24
COMMD3-201ENST00000376836 FSHRP23945 695 aa29.03■■■□□ 2.24
COMMD3-201ENST00000376836 MAPRE1Q15691 268 aaKnown RBP29.03■■■□□ 2.24
COMMD3-201ENST00000376836 OSTM1Q86WC4 334 aa29.03■■■□□ 2.24
COMMD3-201ENST00000376836 KBTBD7Q8WVZ9 684 aa29.03■■■□□ 2.24
COMMD3-201ENST00000376836 SEPT5Q99719 369 aaPredicted RBP29.03■■■□□ 2.24
COMMD3-201ENST00000376836 ABI2Q9NYB9 513 aaPredicted RBP29.03■■■□□ 2.24
COMMD3-201ENST00000376836 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP29.03■■■□□ 2.24
COMMD3-201ENST00000376836 YIPF1Q9Y548 306 aa29.03■■■□□ 2.24
COMMD3-201ENST00000376836 ASS1P00966 412 aaKnown RBP29.02■■■□□ 2.24
COMMD3-201ENST00000376836 PDGFRBP09619 1106 aa29.02■■■□□ 2.24
COMMD3-201ENST00000376836 GBP2P32456 591 aaPredicted RBP29.02■■■□□ 2.24
COMMD3-201ENST00000376836 MGAT5BQ3V5L5 792 aa29.02■■■□□ 2.24
COMMD3-201ENST00000376836 PABPC1LQ4VXU2 614 aaKnown RBP29.02■■■□□ 2.24
COMMD3-201ENST00000376836 LRRTM3Q86VH5 581 aa29.02■■■□□ 2.24
COMMD3-201ENST00000376836 FBXL13Q8NEE6 735 aa29.02■■■□□ 2.24
COMMD3-201ENST00000376836 TAS1R2Q8TE23 839 aa29.02■■■□□ 2.24
COMMD3-201ENST00000376836 SYT15Q9BQS2 421 aa29.02■■■□□ 2.24
COMMD3-201ENST00000376836 MRPL45Q9BRJ2 306 aaKnown RBP29.02■■■□□ 2.24
COMMD3-201ENST00000376836 TSC2P49815 1807 aa29.02■■■□□ 2.24
COMMD3-201ENST00000376836 A8MXQ7 604 aa29.01■■■□□ 2.23
COMMD3-201ENST00000376836 CCDC192P0DO97 292 aa29.01■■■□□ 2.23
COMMD3-201ENST00000376836 WDR44Q5JSH3 913 aa29.01■■■□□ 2.23
COMMD3-201ENST00000376836 SCARA5Q6ZMJ2 495 aa29.01■■■□□ 2.23
COMMD3-201ENST00000376836 C4orf50Q6ZRC1 276 aa29.01■■■□□ 2.23
COMMD3-201ENST00000376836 SPATA2LQ8IUW3 424 aaPredicted RBP29.01■■■□□ 2.23
COMMD3-201ENST00000376836 FAM200AQ8TCP9 573 aa29.01■■■□□ 2.23
COMMD3-201ENST00000376836 CORO1BQ9BR76 489 aa29.01■■■□□ 2.23
COMMD3-201ENST00000376836 CD320Q9NPF0 282 aa29.01■■■□□ 2.23
COMMD3-201ENST00000376836 DNMT3BQ9UBC3 853 aaKnown RBP29.01■■■□□ 2.23
COMMD3-201ENST00000376836 GTF3C4Q9UKN8 822 aa29.01■■■□□ 2.23
COMMD3-201ENST00000376836 C2CD4DB7Z1M9 353 aa29■■■□□ 2.23
COMMD3-201ENST00000376836 VNN2O95498 520 aa29■■■□□ 2.23
COMMD3-201ENST00000376836 TRIM21P19474 475 aaKnown RBP29■■■□□ 2.23
COMMD3-201ENST00000376836 LMO2P25791 158 aa29■■■□□ 2.23
COMMD3-201ENST00000376836 CYP4A22Q5TCH4 519 aa29■■■□□ 2.23
COMMD3-201ENST00000376836 GET4Q7L5D6 327 aaPredicted RBP29■■■□□ 2.23
COMMD3-201ENST00000376836 DNAI2Q9GZS0 605 aa29■■■□□ 2.23
COMMD3-201ENST00000376836 HCFC1R1Q9NWW0 138 aa29■■■□□ 2.23
COMMD3-201ENST00000376836 RAB20Q9NX57 234 aa29■■■□□ 2.23
COMMD3-201ENST00000376836 ASB3Q9Y575 518 aa29■■■□□ 2.23
COMMD3-201ENST00000376836 NOP14P78316 857 aaKnown RBP28.99■■■□□ 2.23
COMMD3-201ENST00000376836 CETN1Q12798 172 aa28.99■■■□□ 2.23
COMMD3-201ENST00000376836 VEPH1Q14D04 833 aa28.99■■■□□ 2.23
COMMD3-201ENST00000376836 TAF12Q16514 161 aa28.99■■■□□ 2.23
COMMD3-201ENST00000376836 CT47A1Q5JQC4 288 aaPredicted RBP28.99■■■□□ 2.23
COMMD3-201ENST00000376836 CCDC183Q5T5S1 534 aa28.99■■■□□ 2.23
COMMD3-201ENST00000376836 SASS6Q6UVJ0 657 aa28.99■■■□□ 2.23
COMMD3-201ENST00000376836 ITIH5Q86UX2 942 aa28.99■■■□□ 2.23
COMMD3-201ENST00000376836 RNF135Q8IUD6 432 aa28.99■■■□□ 2.23
COMMD3-201ENST00000376836 ZDHHC14Q8IZN3 488 aa28.99■■■□□ 2.23
COMMD3-201ENST00000376836 LEMD2Q8NC56 503 aa28.99■■■□□ 2.23
COMMD3-201ENST00000376836 SLC35C1Q96A29 364 aa28.99■■■□□ 2.23
COMMD3-201ENST00000376836 PI4K2AQ9BTU6 479 aa28.99■■■□□ 2.23
COMMD3-201ENST00000376836 SMYD3Q9H7B4 428 aa28.99■■■□□ 2.23
COMMD3-201ENST00000376836 ABCB6Q9NP58 842 aa28.99■■■□□ 2.23
COMMD3-201ENST00000376836 UTP3Q9NQZ2 479 aaKnown RBP eCLIP28.99■■■□□ 2.23
COMMD3-201ENST00000376836 ZNF197O14709 1029 aa28.98■■■□□ 2.23
COMMD3-201ENST00000376836 N4BP1O75113 896 aaKnown RBP28.98■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms