RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 TSPY1Q01534 308 aa22.66■■□□□ 1.22
VSX1-201ENST00000376707 FCHO2Q0JRZ9 810 aa22.66■■□□□ 1.22
VSX1-201ENST00000376707 MTAPQ13126 283 aa22.66■■□□□ 1.22
VSX1-201ENST00000376707 C1orf127Q8N9H9 656 aa22.66■■□□□ 1.22
VSX1-201ENST00000376707 GIPC2Q8TF65 315 aa22.66■■□□□ 1.22
VSX1-201ENST00000376707 ATRIPQ8WXE1 791 aa22.66■■□□□ 1.22
VSX1-201ENST00000376707 MKNK1Q9BUB5 465 aa22.66■■□□□ 1.22
VSX1-201ENST00000376707 TNMDQ9H2S6 317 aa22.66■■□□□ 1.22
VSX1-201ENST00000376707 TFIP11Q9UBB9 837 aaKnown RBP22.66■■□□□ 1.22
VSX1-201ENST00000376707 ITGA11Q9UKX5 1188 aa22.66■■□□□ 1.22
VSX1-201ENST00000376707 PCDHB5Q9Y5E4 795 aa22.66■■□□□ 1.22
VSX1-201ENST00000376707 PCDHGA2Q9Y5H1 932 aa22.66■■□□□ 1.22
VSX1-201ENST00000376707 ARNTLO00327 626 aa22.65■■□□□ 1.22
VSX1-201ENST00000376707 HUS1O60921 280 aa22.65■■□□□ 1.22
VSX1-201ENST00000376707 HAPLN1P10915 354 aaPredicted RBP22.65■■□□□ 1.22
VSX1-201ENST00000376707 CCNE1P24864 410 aa22.65■■□□□ 1.22
VSX1-201ENST00000376707 KPNA1P52294 538 aaPredicted RBP22.65■■□□□ 1.22
VSX1-201ENST00000376707 CYP4F8P98187 520 aa22.65■■□□□ 1.22
VSX1-201ENST00000376707 BFSP1Q12934 665 aa22.65■■□□□ 1.22
VSX1-201ENST00000376707 ZNF687Q8N1G0 1237 aa22.65■■□□□ 1.22
VSX1-201ENST00000376707 PDCL2Q8N4E4 241 aa22.65■■□□□ 1.22
VSX1-201ENST00000376707 CSGALNACT2Q8N6G5 542 aa22.65■■□□□ 1.22
VSX1-201ENST00000376707 LRRC52Q8N7C0 313 aa22.65■■□□□ 1.22
VSX1-201ENST00000376707 RUBCNQ92622 972 aa22.65■■□□□ 1.22
VSX1-201ENST00000376707 CHRDQ9H2X0 955 aa22.65■■□□□ 1.22
VSX1-201ENST00000376707 TASP1Q9H6P5 420 aa22.65■■□□□ 1.22
VSX1-201ENST00000376707 LMAN1LQ9HAT1 526 aa22.65■■□□□ 1.22
VSX1-201ENST00000376707 PDE11AQ9HCR9 933 aa22.65■■□□□ 1.22
VSX1-201ENST00000376707 ZSCAN32Q9NX65 697 aa22.65■■□□□ 1.22
VSX1-201ENST00000376707 SCN1AP35498 2009 aa22.65■■□□□ 1.22
VSX1-201ENST00000376707 CACNA1IQ9P0X4 2223 aa22.64■■□□□ 1.21
VSX1-201ENST00000376707 KRT19P08727 400 aa22.64■■□□□ 1.21
VSX1-201ENST00000376707 TMEM191BP0C7N4 346 aa22.64■■□□□ 1.21
VSX1-201ENST00000376707 ZSCAN22P10073 491 aaPredicted RBP22.64■■□□□ 1.21
VSX1-201ENST00000376707 MLLT6P55198 1093 aaPredicted RBP22.64■■□□□ 1.21
VSX1-201ENST00000376707 E2F4Q16254 413 aa22.64■■□□□ 1.21
VSX1-201ENST00000376707 ARHGAP29Q52LW3 1261 aa22.64■■□□□ 1.21
VSX1-201ENST00000376707 TSSK4Q6SA08 328 aa22.64■■□□□ 1.21
VSX1-201ENST00000376707 GPD1LQ8N335 351 aa22.64■■□□□ 1.21
VSX1-201ENST00000376707 MSANTD3Q96H12 275 aa22.64■■□□□ 1.21
VSX1-201ENST00000376707 IER2Q9BTL4 223 aa22.64■■□□□ 1.21
VSX1-201ENST00000376707 CUEDC2Q9H467 287 aa22.64■■□□□ 1.21
VSX1-201ENST00000376707 C8orf33Q9H7E9 229 aaPredicted RBP22.64■■□□□ 1.21
VSX1-201ENST00000376707 IL21Q9HBE4 155 aa22.64■■□□□ 1.21
VSX1-201ENST00000376707 PRMT8Q9NR22 394 aaPredicted RBP22.64■■□□□ 1.21
VSX1-201ENST00000376707 OBP2AQ9NY56 170 aa22.64■■□□□ 1.21
VSX1-201ENST00000376707 L1RE1Q9UN81 338 aa22.64■■□□□ 1.21
VSX1-201ENST00000376707 R3HCC1Q9Y3T6 440 aaKnown RBP22.64■■□□□ 1.21
VSX1-201ENST00000376707 PATJQ8NI35 1801 aa22.64■■□□□ 1.21
VSX1-201ENST00000376707 COL4A2P08572 1712 aa22.63■■□□□ 1.21
VSX1-201ENST00000376707 SLC38A8A6NNN8 435 aa22.63■■□□□ 1.21
VSX1-201ENST00000376707 KIAA0391O15091 583 aaKnown RBP22.63■■□□□ 1.21
VSX1-201ENST00000376707 CUTAO60888 179 aa22.63■■□□□ 1.21
VSX1-201ENST00000376707 HSP90AA1P07900 732 aaKnown RBP22.63■■□□□ 1.21
VSX1-201ENST00000376707 ID4P47928 161 aa22.63■■□□□ 1.21
VSX1-201ENST00000376707 RBP5P82980 135 aa22.63■■□□□ 1.21
VSX1-201ENST00000376707 AMPD3Q01432 767 aa22.63■■□□□ 1.21
VSX1-201ENST00000376707 NFE2Q16621 373 aaPredicted RBP22.63■■□□□ 1.21
VSX1-201ENST00000376707 C1orf228Q6PIY5 440 aa22.63■■□□□ 1.21
VSX1-201ENST00000376707 TMEM86AQ8N2M4 240 aa22.63■■□□□ 1.21
VSX1-201ENST00000376707 SUMF1Q8NBK3 374 aa22.63■■□□□ 1.21
VSX1-201ENST00000376707 ZBTB44Q8NCP5 570 aa22.63■■□□□ 1.21
VSX1-201ENST00000376707 DHX58Q96C10 678 aa22.63■■□□□ 1.21
VSX1-201ENST00000376707 FAM84AQ96KN4 292 aa22.63■■□□□ 1.21
VSX1-201ENST00000376707 MTMR12Q9C0I1 747 aa22.63■■□□□ 1.21
VSX1-201ENST00000376707 KBTBD4Q9NVX7 518 aa22.63■■□□□ 1.21
VSX1-201ENST00000376707 DDX43Q9NXZ2 648 aaKnown RBP22.63■■□□□ 1.21
VSX1-201ENST00000376707 GVINP1Q7Z2Y8 2422 aa22.62■■□□□ 1.21
VSX1-201ENST00000376707 PRPF40AO75400 957 aaKnown RBP22.62■■□□□ 1.21
VSX1-201ENST00000376707 PRAMEF12O95522 483 aa22.62■■□□□ 1.21
VSX1-201ENST00000376707 F13A1P00488 732 aa22.62■■□□□ 1.21
VSX1-201ENST00000376707 WEE1P30291 646 aa22.62■■□□□ 1.21
VSX1-201ENST00000376707 SOX9P48436 509 aa22.62■■□□□ 1.21
VSX1-201ENST00000376707 MYL7Q01449 175 aa22.62■■□□□ 1.21
VSX1-201ENST00000376707 PPP2R5DQ14738 602 aa22.62■■□□□ 1.21
VSX1-201ENST00000376707 SHC4Q6S5L8 630 aa22.62■■□□□ 1.21
VSX1-201ENST00000376707 KIAA2013Q8IYS2 634 aa22.62■■□□□ 1.21
VSX1-201ENST00000376707 GLIS3Q8NEA6 775 aa22.62■■□□□ 1.21
VSX1-201ENST00000376707 BPIFB1Q8TDL5 484 aa22.62■■□□□ 1.21
VSX1-201ENST00000376707 HPS3Q969F9 1004 aa22.62■■□□□ 1.21
VSX1-201ENST00000376707 ANKRD36BP1Q96IX9 119 aa22.62■■□□□ 1.21
VSX1-201ENST00000376707 ZFYVE19Q96K21 471 aa22.62■■□□□ 1.21
VSX1-201ENST00000376707 LRRC3BQ96PB8 259 aa22.62■■□□□ 1.21
VSX1-201ENST00000376707 ACBD6Q9BR61 282 aa22.62■■□□□ 1.21
VSX1-201ENST00000376707 PI4K2AQ9BTU6 479 aa22.62■■□□□ 1.21
VSX1-201ENST00000376707 TRIM9Q9C026 710 aa22.62■■□□□ 1.21
VSX1-201ENST00000376707 TMLHEQ9NVH6 421 aa22.62■■□□□ 1.21
VSX1-201ENST00000376707 GTF3C3Q9Y5Q9 886 aa22.62■■□□□ 1.21
VSX1-201ENST00000376707 SNX9Q9Y5X1 595 aa22.62■■□□□ 1.21
VSX1-201ENST00000376707 TICRRQ7Z2Z1 1910 aa22.62■■□□□ 1.21
VSX1-201ENST00000376707 ZNF233A6NK53 670 aa22.61■■□□□ 1.21
VSX1-201ENST00000376707 ASIC1P78348 528 aa22.61■■□□□ 1.21
VSX1-201ENST00000376707 FOXD4L5Q5VV16 416 aaPredicted RBP22.61■■□□□ 1.21
VSX1-201ENST00000376707 ATL3Q6DD88 541 aa22.61■■□□□ 1.21
VSX1-201ENST00000376707 IQUBQ8NA54 791 aa22.61■■□□□ 1.21
VSX1-201ENST00000376707 TTC8Q8TAM2 541 aa22.61■■□□□ 1.21
VSX1-201ENST00000376707 CXorf38Q8TB03 319 aa22.61■■□□□ 1.21
VSX1-201ENST00000376707 FOXD4L4Q8WXT5 416 aaPredicted RBP22.61■■□□□ 1.21
VSX1-201ENST00000376707 NELL1Q92832 810 aa22.61■■□□□ 1.21
VSX1-201ENST00000376707 FAM126AQ9BYI3 521 aaPredicted RBP22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms