RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 USP6P35125 1406 aa12.98□□□□□ -0.33
VPS13A-204ENST00000376634 PDZK1P1A8MUH7 402 aa12.98□□□□□ -0.33
VPS13A-204ENST00000376634 SOX11P35716 441 aa12.98□□□□□ -0.33
VPS13A-204ENST00000376634 ERFP50548 548 aa12.98□□□□□ -0.33
VPS13A-204ENST00000376634 ZRANB3Q5FWF4 1079 aa12.98□□□□□ -0.33
VPS13A-204ENST00000376634 NEK10Q6ZWH5 1172 aa12.98□□□□□ -0.33
VPS13A-204ENST00000376634 SPRTNQ9H040 489 aaPredicted RBP12.98□□□□□ -0.33
VPS13A-204ENST00000376634 PCDHA10Q9Y5I2 948 aa12.98□□□□□ -0.33
VPS13A-204ENST00000376634 MTSS1O43312 755 aa12.98□□□□□ -0.33
VPS13A-204ENST00000376634 NMT2O60551 498 aa12.98□□□□□ -0.33
VPS13A-204ENST00000376634 CD4P01730 458 aa12.98□□□□□ -0.33
VPS13A-204ENST00000376634 PCSK1P29120 753 aa12.98□□□□□ -0.33
VPS13A-204ENST00000376634 FAM83EQ2M2I3 478 aa12.98□□□□□ -0.33
VPS13A-204ENST00000376634 WWOXQ9NZC7 414 aa12.98□□□□□ -0.33
VPS13A-204ENST00000376634 NEU2Q9Y3R4 380 aa12.98□□□□□ -0.33
VPS13A-204ENST00000376634 XPO1O14980 1071 aaKnown RBP12.98□□□□□ -0.33
VPS13A-204ENST00000376634 USP1O94782 785 aa12.98□□□□□ -0.33
VPS13A-204ENST00000376634 RHOBTB1O94844 696 aa12.98□□□□□ -0.33
VPS13A-204ENST00000376634 CCND1P24385 295 aa12.98□□□□□ -0.33
VPS13A-204ENST00000376634 CUL4AQ13619 759 aa12.98□□□□□ -0.33
VPS13A-204ENST00000376634 TRIP10Q15642 601 aa12.98□□□□□ -0.33
VPS13A-204ENST00000376634 GALNTL6Q49A17 601 aa12.98□□□□□ -0.33
VPS13A-204ENST00000376634 SLC35G2Q8TBE7 412 aa12.98□□□□□ -0.33
VPS13A-204ENST00000376634 PCDHB7Q9Y5E2 793 aa12.98□□□□□ -0.33
VPS13A-204ENST00000376634 TRIP11Q15643 1979 aa12.98□□□□□ -0.33
VPS13A-204ENST00000376634 SAMD9LQ8IVG5 1584 aa12.98□□□□□ -0.33
VPS13A-204ENST00000376634 ALOX15P16050 662 aaPredicted RBP12.98□□□□□ -0.33
VPS13A-204ENST00000376634 PRRG3Q9BZD7 231 aa12.98□□□□□ -0.33
VPS13A-204ENST00000376634 MBD2Q9UBB5 411 aa12.98□□□□□ -0.33
VPS13A-204ENST00000376634 NBPF26B4DH59 902 aa12.98□□□□□ -0.33
VPS13A-204ENST00000376634 PRKCBP05771 671 aa12.98□□□□□ -0.33
VPS13A-204ENST00000376634 TALDO1P37837 337 aa12.98□□□□□ -0.33
VPS13A-204ENST00000376634 RGS2P41220 211 aa12.98□□□□□ -0.33
VPS13A-204ENST00000376634 NBPF15Q8N660 670 aa12.98□□□□□ -0.33
VPS13A-204ENST00000376634 C1orf131Q8NDD1 294 aaKnown RBP12.98□□□□□ -0.33
VPS13A-204ENST00000376634 ANKRD65E5RJM6 399 aa12.98□□□□□ -0.33
VPS13A-204ENST00000376634 ARHGAP15Q53QZ3 475 aa12.98□□□□□ -0.33
VPS13A-204ENST00000376634 IL17RAQ96F46 866 aa12.98□□□□□ -0.33
VPS13A-204ENST00000376634 ZMYND8Q9ULU4 1186 aaPredicted RBP12.98□□□□□ -0.33
VPS13A-204ENST00000376634 RPS7P62081 194 aaKnown RBP12.98□□□□□ -0.33
VPS13A-204ENST00000376634 TRPM8Q7Z2W7 1104 aa12.98□□□□□ -0.33
VPS13A-204ENST00000376634 GPR101Q96P66 508 aaPredicted RBP12.98□□□□□ -0.33
VPS13A-204ENST00000376634 RFX7Q2KHR2 1363 aa12.98□□□□□ -0.33
VPS13A-204ENST00000376634 CYP26A1O43174 497 aa12.97□□□□□ -0.33
VPS13A-204ENST00000376634 CASP1P29466 404 aa12.97□□□□□ -0.33
VPS13A-204ENST00000376634 SH3BP5LQ7L8J4 393 aa12.97□□□□□ -0.33
VPS13A-204ENST00000376634 E2F8A0AVK6 867 aa12.97□□□□□ -0.33
VPS13A-204ENST00000376634 ATP1A1P05023 1023 aaKnown RBP12.97□□□□□ -0.33
VPS13A-204ENST00000376634 ATP6V1C1P21283 382 aa12.97□□□□□ -0.33
VPS13A-204ENST00000376634 COL15A1P39059 1388 aa12.97□□□□□ -0.33
VPS13A-204ENST00000376634 COG2Q14746 738 aa12.97□□□□□ -0.33
VPS13A-204ENST00000376634 CLEC4GQ6UXB4 293 aa12.97□□□□□ -0.33
VPS13A-204ENST00000376634 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.97□□□□□ -0.33
VPS13A-204ENST00000376634 SRLQ86TD4 932 aa12.97□□□□□ -0.33
VPS13A-204ENST00000376634 OTUD5Q96G74 571 aa12.97□□□□□ -0.33
VPS13A-204ENST00000376634 ZNF668Q96K58 619 aaPredicted RBP12.97□□□□□ -0.33
VPS13A-204ENST00000376634 FANCEQ9HB96 536 aa12.97□□□□□ -0.33
VPS13A-204ENST00000376634 ASXL3Q9C0F0 2248 aa12.97□□□□□ -0.33
VPS13A-204ENST00000376634 DGKIO75912 1065 aa12.97□□□□□ -0.33
VPS13A-204ENST00000376634 ACADSBP45954 432 aa12.97□□□□□ -0.33
VPS13A-204ENST00000376634 KCND2Q9NZV8 630 aa12.97□□□□□ -0.33
VPS13A-204ENST00000376634 STRNO43815 780 aa12.97□□□□□ -0.33
VPS13A-204ENST00000376634 C21orf2O43822 256 aa12.97□□□□□ -0.33
VPS13A-204ENST00000376634 TSC22D2O75157 780 aa12.97□□□□□ -0.33
VPS13A-204ENST00000376634 SCP2P22307 547 aa12.97□□□□□ -0.33
VPS13A-204ENST00000376634 KBTBD12Q3ZCT8 623 aa12.97□□□□□ -0.33
VPS13A-204ENST00000376634 GPR141Q7Z602 305 aa12.97□□□□□ -0.33
VPS13A-204ENST00000376634 TFB1MQ8WVM0 346 aaKnown RBP12.97□□□□□ -0.33
VPS13A-204ENST00000376634 MS4A14Q96JA4 679 aa12.97□□□□□ -0.33
VPS13A-204ENST00000376634 FOXP3Q9BZS1 431 aa12.97□□□□□ -0.33
VPS13A-204ENST00000376634 ZNF638Q14966 1978 aaKnown RBP12.97□□□□□ -0.33
VPS13A-204ENST00000376634 F8W810 466 aa12.97□□□□□ -0.33
VPS13A-204ENST00000376634 KPNB1Q14974 876 aaKnown RBP12.97□□□□□ -0.33
VPS13A-204ENST00000376634 DCAF6Q58WW2 860 aa12.97□□□□□ -0.33
VPS13A-204ENST00000376634 GUF1Q8N442 669 aaKnown RBP12.97□□□□□ -0.33
VPS13A-204ENST00000376634 EXD1Q8NHP7 514 aa12.97□□□□□ -0.33
VPS13A-204ENST00000376634 SLC30A5Q8TAD4 765 aa12.97□□□□□ -0.33
VPS13A-204ENST00000376634 OSBPL5Q9H0X9 879 aaPredicted RBP12.97□□□□□ -0.33
VPS13A-204ENST00000376634 HERC5Q9UII4 1024 aaKnown RBP12.97□□□□□ -0.33
VPS13A-204ENST00000376634 RNF112Q9ULX5 631 aa12.97□□□□□ -0.33
VPS13A-204ENST00000376634 COPAP53621 1224 aa12.97□□□□□ -0.33
VPS13A-204ENST00000376634 ATXN3P54252 364 aaPredicted RBP12.97□□□□□ -0.33
VPS13A-204ENST00000376634 SPATA4Q8NEY3 305 aa12.97□□□□□ -0.33
VPS13A-204ENST00000376634 RIN3Q8TB24 985 aa12.97□□□□□ -0.33
VPS13A-204ENST00000376634 GOLPH3Q9H4A6 298 aa12.97□□□□□ -0.33
VPS13A-204ENST00000376634 SMIM31A0A1B0GVY4 71 aa12.97□□□□□ -0.33
VPS13A-204ENST00000376634 ZNF839A8K0R7 811 aa12.97□□□□□ -0.33
VPS13A-204ENST00000376634 GRAP2O75791 330 aa12.97□□□□□ -0.33
VPS13A-204ENST00000376634 CYP2D6P10635 497 aa12.97□□□□□ -0.33
VPS13A-204ENST00000376634 HPGDP15428 266 aa12.97□□□□□ -0.33
VPS13A-204ENST00000376634 FEN1P39748 380 aaKnown RBP12.97□□□□□ -0.33
VPS13A-204ENST00000376634 SV2CQ496J9 727 aa12.97□□□□□ -0.33
VPS13A-204ENST00000376634 IER5Q5VY09 327 aa12.97□□□□□ -0.33
VPS13A-204ENST00000376634 KLHL24Q6TFL4 600 aa12.97□□□□□ -0.33
VPS13A-204ENST00000376634 C3orf62Q6ZUJ4 267 aa12.97□□□□□ -0.33
VPS13A-204ENST00000376634 DDHD1Q8NEL9 900 aa12.97□□□□□ -0.33
VPS13A-204ENST00000376634 DNAJC9Q8WXX5 260 aa12.97□□□□□ -0.33
VPS13A-204ENST00000376634 CD2BP2O95400 341 aaKnown RBP12.97□□□□□ -0.33
VPS13A-204ENST00000376634 LONRF1Q17RB8 773 aa12.97□□□□□ -0.33
VPS13A-204ENST00000376634 LRIG3Q6UXM1 1119 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms