RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 ATP13A4Q4VNC1 1196 aa13.36□□□□□ -0.27
CLCN6-206ENST00000376496 PLEKHA7Q6IQ23 1121 aa13.36□□□□□ -0.27
CLCN6-206ENST00000376496 NT5DC4Q86YG4 428 aa13.36□□□□□ -0.27
CLCN6-206ENST00000376496 RASGEF1CQ8N431 466 aa13.36□□□□□ -0.27
CLCN6-206ENST00000376496 EMC1Q8N766 993 aa13.36□□□□□ -0.27
CLCN6-206ENST00000376496 PCSK9Q8NBP7 692 aaKnown RBP13.36□□□□□ -0.27
CLCN6-206ENST00000376496 ARFGAP3Q9NP61 516 aa13.36□□□□□ -0.27
CLCN6-206ENST00000376496 PCDHGC3Q9UN70 934 aa13.36□□□□□ -0.27
CLCN6-206ENST00000376496 TRIM17Q9Y577 477 aa13.36□□□□□ -0.27
CLCN6-206ENST00000376496 MKI67P46013 3256 aaKnown RBP13.36□□□□□ -0.27
CLCN6-206ENST00000376496 CCDC151A5D8V7 595 aa13.35□□□□□ -0.27
CLCN6-206ENST00000376496 ZRANB2O95218 330 aaKnown RBP eCLIP13.35□□□□□ -0.27
CLCN6-206ENST00000376496 ERBB2P04626 1255 aa13.35□□□□□ -0.27
CLCN6-206ENST00000376496 NKX3-2P78367 333 aa13.35□□□□□ -0.27
CLCN6-206ENST00000376496 C1QBPQ07021 282 aaKnown RBP13.35□□□□□ -0.27
CLCN6-206ENST00000376496 ZNF252P-AS1Q0IIN9 211 aa13.35□□□□□ -0.27
CLCN6-206ENST00000376496 LPIN1Q14693 890 aa13.35□□□□□ -0.27
CLCN6-206ENST00000376496 FBXO47Q5MNV8 452 aa13.35□□□□□ -0.27
CLCN6-206ENST00000376496 UBL4BQ8N7F7 174 aa13.35□□□□□ -0.27
CLCN6-206ENST00000376496 GSTCDQ8NEC7 633 aa13.35□□□□□ -0.27
CLCN6-206ENST00000376496 JOSD2Q8TAC2 188 aa13.35□□□□□ -0.27
CLCN6-206ENST00000376496 PAAF1Q9BRP4 392 aa13.35□□□□□ -0.27
CLCN6-206ENST00000376496 CYP3A43Q9HB55 503 aa13.35□□□□□ -0.27
CLCN6-206ENST00000376496 TMEM59LQ9UK28 342 aa13.35□□□□□ -0.27
CLCN6-206ENST00000376496 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.35□□□□□ -0.27
CLCN6-206ENST00000376496 PIRO00625 290 aa13.35□□□□□ -0.27
CLCN6-206ENST00000376496 FKTNO75072 461 aa13.35□□□□□ -0.27
CLCN6-206ENST00000376496 PAEPP09466 180 aa13.35□□□□□ -0.27
CLCN6-206ENST00000376496 MYBL1P10243 752 aa13.35□□□□□ -0.27
CLCN6-206ENST00000376496 CST5P28325 142 aaPredicted RBP13.35□□□□□ -0.27
CLCN6-206ENST00000376496 MAP2K2P36507 400 aa13.35□□□□□ -0.27
CLCN6-206ENST00000376496 GUCY2DQ02846 1103 aa13.35□□□□□ -0.27
CLCN6-206ENST00000376496 BEND6Q5SZJ8 279 aaPredicted RBP13.35□□□□□ -0.27
CLCN6-206ENST00000376496 PPP1R26Q5T8A7 1209 aaPredicted RBP13.35□□□□□ -0.27
CLCN6-206ENST00000376496 DNAJC24Q6P3W2 148 aa13.35□□□□□ -0.27
CLCN6-206ENST00000376496 FEZF2Q8TBJ5 459 aa13.35□□□□□ -0.27
CLCN6-206ENST00000376496 TRIM11Q96F44 468 aa13.35□□□□□ -0.27
CLCN6-206ENST00000376496 RPS6KC1Q96S38 1066 aa13.35□□□□□ -0.27
CLCN6-206ENST00000376496 HERPUD2Q9BSE4 406 aa13.35□□□□□ -0.27
CLCN6-206ENST00000376496 NT5C1AQ9BXI3 368 aa13.35□□□□□ -0.27
CLCN6-206ENST00000376496 SYNCQ9H7C4 482 aa13.35□□□□□ -0.27
CLCN6-206ENST00000376496 RNF14Q9UBS8 474 aa13.35□□□□□ -0.27
CLCN6-206ENST00000376496 AMACRQ9UHK6 382 aa13.35□□□□□ -0.27
CLCN6-206ENST00000376496 TSPAN16Q9UKR8 245 aa13.35□□□□□ -0.27
CLCN6-206ENST00000376496 DERAQ9Y315 318 aa13.35□□□□□ -0.27
CLCN6-206ENST00000376496 KPNA7A9QM74 516 aa13.34□□□□□ -0.27
CLCN6-206ENST00000376496 F8VP50 259 aa13.34□□□□□ -0.27
CLCN6-206ENST00000376496 HEXIM1O94992 359 aaKnown RBP13.34□□□□□ -0.27
CLCN6-206ENST00000376496 GRK4P32298 578 aa13.34□□□□□ -0.27
CLCN6-206ENST00000376496 CTNNA1P35221 906 aaKnown RBP13.34□□□□□ -0.27
CLCN6-206ENST00000376496 SCNN1GP51170 649 aa13.34□□□□□ -0.27
CLCN6-206ENST00000376496 ITIH3Q06033 890 aa13.34□□□□□ -0.27
CLCN6-206ENST00000376496 INCA1Q0VD86 236 aa13.34□□□□□ -0.27
CLCN6-206ENST00000376496 BRD3Q15059 726 aa13.34□□□□□ -0.27
CLCN6-206ENST00000376496 GOLGA7BQ2TAP0 167 aa13.34□□□□□ -0.27
CLCN6-206ENST00000376496 PAN2Q504Q3 1202 aaKnown RBP13.34□□□□□ -0.27
CLCN6-206ENST00000376496 SGO2Q562F6 1265 aa13.34□□□□□ -0.27
CLCN6-206ENST00000376496 PIWIL1Q96J94 861 aaKnown RBP13.34□□□□□ -0.27
CLCN6-206ENST00000376496 GLT1D1Q96MS3 346 aa13.34□□□□□ -0.27
CLCN6-206ENST00000376496 CARD9Q9H257 536 aa13.34□□□□□ -0.27
CLCN6-206ENST00000376496 CEP83Q9Y592 693 aa13.34□□□□□ -0.27
CLCN6-206ENST00000376496 PDCD11Q14690 1871 aaKnown RBP13.34□□□□□ -0.27
CLCN6-206ENST00000376496 PROSCO94903 275 aa13.34□□□□□ -0.27
CLCN6-206ENST00000376496 LSM8O95777 96 aaKnown RBP13.34□□□□□ -0.27
CLCN6-206ENST00000376496 POMCP01189 267 aa13.34□□□□□ -0.27
CLCN6-206ENST00000376496 KCNE1P15382 129 aa13.34□□□□□ -0.27
CLCN6-206ENST00000376496 ACAT1P24752 427 aaKnown RBP13.34□□□□□ -0.27
CLCN6-206ENST00000376496 PAK2Q13177 524 aa13.34□□□□□ -0.27
CLCN6-206ENST00000376496 TXNRD3NBQ6F5E7 133 aa13.34□□□□□ -0.27
CLCN6-206ENST00000376496 DCUN1D2Q6PH85 259 aa13.34□□□□□ -0.27
CLCN6-206ENST00000376496 AGMOQ6ZNB7 445 aa13.34□□□□□ -0.27
CLCN6-206ENST00000376496 DDX42Q86XP3 938 aaKnown RBP eCLIP13.34□□□□□ -0.27
CLCN6-206ENST00000376496 REM2Q8IYK8 340 aaPredicted RBP13.34□□□□□ -0.27
CLCN6-206ENST00000376496 KBTBD7Q8WVZ9 684 aa13.34□□□□□ -0.27
CLCN6-206ENST00000376496 IFT81Q8WYA0 676 aa13.34□□□□□ -0.27
CLCN6-206ENST00000376496 CFHR5Q9BXR6 569 aa13.34□□□□□ -0.27
CLCN6-206ENST00000376496 WNT8AQ9H1J5 351 aa13.34□□□□□ -0.27
CLCN6-206ENST00000376496 EPB41L5Q9HCM4 733 aa13.34□□□□□ -0.27
CLCN6-206ENST00000376496 HMX1Q9NP08 348 aaPredicted RBP13.34□□□□□ -0.27
CLCN6-206ENST00000376496 PARVAQ9NVD7 372 aa13.34□□□□□ -0.27
CLCN6-206ENST00000376496 L1RE1Q9UN81 338 aa13.34□□□□□ -0.27
CLCN6-206ENST00000376496 INPP5FQ9Y2H2 1132 aa13.34□□□□□ -0.27
CLCN6-206ENST00000376496 PCDHA3Q9Y5H8 950 aa13.34□□□□□ -0.27
CLCN6-206ENST00000376496 TIMM13Q9Y5L4 95 aaPredicted RBP13.34□□□□□ -0.27
CLCN6-206ENST00000376496 A0A1W2PQ45 241 aaPredicted RBP13.33□□□□□ -0.27
CLCN6-206ENST00000376496 A0A1W2PQY0 241 aa13.33□□□□□ -0.27
CLCN6-206ENST00000376496 TCRBV5S1A1TA0A578 114 aa13.33□□□□□ -0.27
CLCN6-206ENST00000376496 CASTOR2A6NHX0 329 aa13.33□□□□□ -0.27
CLCN6-206ENST00000376496 A8MXQ7 604 aa13.33□□□□□ -0.27
CLCN6-206ENST00000376496 MIF4GDA9UHW6 222 aaKnown RBP13.33□□□□□ -0.27
CLCN6-206ENST00000376496 CES2O00748 559 aa13.33□□□□□ -0.27
CLCN6-206ENST00000376496 SART1O43290 800 aaKnown RBP13.33□□□□□ -0.27
CLCN6-206ENST00000376496 MED7O43513 233 aa13.33□□□□□ -0.27
CLCN6-206ENST00000376496 ATP2C2O75185 946 aa13.33□□□□□ -0.27
CLCN6-206ENST00000376496 GRAP2O75791 330 aa13.33□□□□□ -0.27
CLCN6-206ENST00000376496 CCDC130P13994 396 aa13.33□□□□□ -0.27
CLCN6-206ENST00000376496 RFC1P35251 1148 aaPredicted RBP13.33□□□□□ -0.27
CLCN6-206ENST00000376496 PSMC1P62191 440 aaKnown RBP13.33□□□□□ -0.27
CLCN6-206ENST00000376496 XKR4Q5GH76 650 aa13.33□□□□□ -0.27
CLCN6-206ENST00000376496 WDR93Q6P2C0 686 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms