RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 CYP3A43Q9HB55 503 aa22.54■■□□□ 1.2
HLA-C-201ENST00000376228 SEPT11Q9NVA2 429 aaKnown RBP22.54■■□□□ 1.2
HLA-C-201ENST00000376228 DPP3Q9NY33 737 aa22.54■■□□□ 1.2
HLA-C-201ENST00000376228 MRPL42Q9Y6G3 142 aaKnown RBP22.54■■□□□ 1.2
HLA-C-201ENST00000376228 ITGB3P05106 788 aa22.53■■□□□ 1.2
HLA-C-201ENST00000376228 CTNNB1P35222 781 aa22.53■■□□□ 1.2
HLA-C-201ENST00000376228 NAP1L1P55209 391 aaKnown RBP22.53■■□□□ 1.2
HLA-C-201ENST00000376228 FAM189BP81408 668 aa22.53■■□□□ 1.2
HLA-C-201ENST00000376228 CLEC16AQ2KHT3 1053 aa22.53■■□□□ 1.2
HLA-C-201ENST00000376228 ACAD10Q6JQN1 1059 aa22.53■■□□□ 1.2
HLA-C-201ENST00000376228 SLFN11Q7Z7L1 901 aa22.53■■□□□ 1.2
HLA-C-201ENST00000376228 RHOT2Q8IXI1 618 aa22.53■■□□□ 1.2
HLA-C-201ENST00000376228 LRRC57Q8N9N7 239 aa22.53■■□□□ 1.2
HLA-C-201ENST00000376228 TPCN2Q8NHX9 752 aa22.53■■□□□ 1.2
HLA-C-201ENST00000376228 CARD6Q9BX69 1037 aa22.53■■□□□ 1.2
HLA-C-201ENST00000376228 TRIM6Q9C030 488 aaPredicted RBP22.53■■□□□ 1.2
HLA-C-201ENST00000376228 ACP6Q9NPH0 428 aa22.53■■□□□ 1.2
HLA-C-201ENST00000376228 CISHQ9NSE2 258 aa22.53■■□□□ 1.2
HLA-C-201ENST00000376228 TMEM161AQ9NX61 479 aa22.53■■□□□ 1.2
HLA-C-201ENST00000376228 SNX12Q9UMY4 172 aa22.53■■□□□ 1.2
HLA-C-201ENST00000376228 SPTBN5Q9NRC6 3674 aaKnown RBP22.53■■□□□ 1.2
HLA-C-201ENST00000376228 GRID2IPA4D2P6 1211 aa22.52■■□□□ 1.2
HLA-C-201ENST00000376228 TBKBP1A7MCY6 615 aa22.52■■□□□ 1.2
HLA-C-201ENST00000376228 ENC1O14682 589 aa22.52■■□□□ 1.2
HLA-C-201ENST00000376228 PALMO75781 387 aa22.52■■□□□ 1.2
HLA-C-201ENST00000376228 MTA2O94776 668 aa22.52■■□□□ 1.2
HLA-C-201ENST00000376228 CYP1A1P04798 512 aaPredicted RBP22.52■■□□□ 1.2
HLA-C-201ENST00000376228 UNGP13051 313 aaPredicted RBP22.52■■□□□ 1.2
HLA-C-201ENST00000376228 KCNE1P15382 129 aa22.52■■□□□ 1.2
HLA-C-201ENST00000376228 TUBB4BP68371 445 aa22.52■■□□□ 1.2
HLA-C-201ENST00000376228 GPC5P78333 572 aa22.52■■□□□ 1.2
HLA-C-201ENST00000376228 TAF3Q5VWG9 929 aa22.52■■□□□ 1.2
HLA-C-201ENST00000376228 TWF2Q6IBS0 349 aaKnown RBP22.52■■□□□ 1.2
HLA-C-201ENST00000376228 ECHDC2Q86YB7 292 aa22.52■■□□□ 1.2
HLA-C-201ENST00000376228 CMTR2Q8IYT2 770 aaKnown RBP22.52■■□□□ 1.2
HLA-C-201ENST00000376228 MNS1Q8NEH6 495 aa22.52■■□□□ 1.2
HLA-C-201ENST00000376228 KIF12Q96FN5 646 aa22.52■■□□□ 1.2
HLA-C-201ENST00000376228 HCSTQ9UBK5 93 aa22.52■■□□□ 1.2
HLA-C-201ENST00000376228 EFCAB8A8MWE9 144 aa22.52■■□□□ 1.19
HLA-C-201ENST00000376228 KRT19P08727 400 aa22.52■■□□□ 1.19
HLA-C-201ENST00000376228 P4HA1P13674 534 aa22.52■■□□□ 1.19
HLA-C-201ENST00000376228 TCP1P17987 556 aaKnown RBP22.52■■□□□ 1.19
HLA-C-201ENST00000376228 MEI1Q5TIA1 1274 aa22.52■■□□□ 1.19
HLA-C-201ENST00000376228 SYCE1Q8N0S2 351 aa22.52■■□□□ 1.19
HLA-C-201ENST00000376228 TTC39CQ8N584 583 aa22.52■■□□□ 1.19
HLA-C-201ENST00000376228 SAMD11Q96NU1 681 aa22.52■■□□□ 1.19
HLA-C-201ENST00000376228 TLR10Q9BXR5 811 aa22.52■■□□□ 1.19
HLA-C-201ENST00000376228 NXF3Q9H4D5 531 aaKnown RBP22.52■■□□□ 1.19
HLA-C-201ENST00000376228 PRDM6Q9NQX0 595 aa22.52■■□□□ 1.19
HLA-C-201ENST00000376228 PLXNA4Q9HCM2 1894 aa22.51■■□□□ 1.19
HLA-C-201ENST00000376228 TMCO5BA8MYB1 307 aa22.51■■□□□ 1.19
HLA-C-201ENST00000376228 TADA3O75528 432 aa22.51■■□□□ 1.19
HLA-C-201ENST00000376228 RECQL4O94761 1208 aa22.51■■□□□ 1.19
HLA-C-201ENST00000376228 GNA15P30679 374 aa22.51■■□□□ 1.19
HLA-C-201ENST00000376228 NOP2P46087 812 aaKnown RBP22.51■■□□□ 1.19
HLA-C-201ENST00000376228 FAM43BQ6ZT52 329 aaPredicted RBP22.51■■□□□ 1.19
HLA-C-201ENST00000376228 BEST2Q8NFU1 509 aa22.51■■□□□ 1.19
HLA-C-201ENST00000376228 SLC35G2Q8TBE7 412 aa22.51■■□□□ 1.19
HLA-C-201ENST00000376228 CLP1Q92989 425 aaKnown RBP22.51■■□□□ 1.19
HLA-C-201ENST00000376228 THAP2Q9H0W7 228 aa22.51■■□□□ 1.19
HLA-C-201ENST00000376228 ELAC1Q9H777 363 aaKnown RBP22.51■■□□□ 1.19
HLA-C-201ENST00000376228 RNF19AQ9NV58 838 aa22.51■■□□□ 1.19
HLA-C-201ENST00000376228 GTF3C4Q9UKN8 822 aa22.51■■□□□ 1.19
HLA-C-201ENST00000376228 UBQLN1Q9UMX0 589 aaKnown RBP22.51■■□□□ 1.19
HLA-C-201ENST00000376228 HYOU1Q9Y4L1 999 aa22.51■■□□□ 1.19
HLA-C-201ENST00000376228 SCN1AP35498 2009 aa22.5■■□□□ 1.19
HLA-C-201ENST00000376228 A0A0U1RQF3 1178 aa22.5■■□□□ 1.19
HLA-C-201ENST00000376228 XPOTO43592 962 aaKnown RBP22.5■■□□□ 1.19
HLA-C-201ENST00000376228 ATF7P17544 494 aaPredicted RBP22.5■■□□□ 1.19
HLA-C-201ENST00000376228 POLR2BP30876 1174 aaKnown RBP22.5■■□□□ 1.19
HLA-C-201ENST00000376228 CENPCQ03188 943 aa22.5■■□□□ 1.19
HLA-C-201ENST00000376228 GPM6BQ13491 265 aa22.5■■□□□ 1.19
HLA-C-201ENST00000376228 WDR72Q3MJ13 1102 aa22.5■■□□□ 1.19
HLA-C-201ENST00000376228 DNAAF5Q86Y56 855 aa22.5■■□□□ 1.19
HLA-C-201ENST00000376228 LRRC52Q8N7C0 313 aa22.5■■□□□ 1.19
HLA-C-201ENST00000376228 SMG8Q8ND04 991 aaKnown RBP22.5■■□□□ 1.19
HLA-C-201ENST00000376228 HPDLQ96IR7 371 aa22.5■■□□□ 1.19
HLA-C-201ENST00000376228 ZMAT2Q96NC0 199 aaKnown RBP22.5■■□□□ 1.19
HLA-C-201ENST00000376228 TRAIPQ9BWF2 469 aa22.5■■□□□ 1.19
HLA-C-201ENST00000376228 AGAP1Q9UPQ3 857 aa22.5■■□□□ 1.19
HLA-C-201ENST00000376228 IPPQ9Y573 584 aa22.5■■□□□ 1.19
HLA-C-201ENST00000376228 H3BNC9 293 aa22.49■■□□□ 1.19
HLA-C-201ENST00000376228 CSPG5O95196 566 aa22.49■■□□□ 1.19
HLA-C-201ENST00000376228 CYP1A2P05177 515 aa22.49■■□□□ 1.19
HLA-C-201ENST00000376228 PAEPP09466 180 aa22.49■■□□□ 1.19
HLA-C-201ENST00000376228 CYP3A5P20815 502 aa22.49■■□□□ 1.19
HLA-C-201ENST00000376228 BMPR1AP36894 532 aa22.49■■□□□ 1.19
HLA-C-201ENST00000376228 ZNF606Q8WXB4 792 aa22.49■■□□□ 1.19
HLA-C-201ENST00000376228 LPPQ93052 612 aa22.49■■□□□ 1.19
HLA-C-201ENST00000376228 ARHGEF26Q96DR7 871 aa22.49■■□□□ 1.19
HLA-C-201ENST00000376228 TRIM11Q96F44 468 aa22.49■■□□□ 1.19
HLA-C-201ENST00000376228 VCPIP1Q96JH7 1222 aa22.49■■□□□ 1.19
HLA-C-201ENST00000376228 ABCB6Q9NP58 842 aa22.49■■□□□ 1.19
HLA-C-201ENST00000376228 RNF216Q9NWF9 866 aaPredicted RBP22.49■■□□□ 1.19
HLA-C-201ENST00000376228 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.49■■□□□ 1.19
HLA-C-201ENST00000376228 VCANP13611 3396 aa22.49■■□□□ 1.19
HLA-C-201ENST00000376228 MYBL1P10243 752 aa22.48■■□□□ 1.19
HLA-C-201ENST00000376228 POU3F3P20264 500 aaPredicted RBP22.48■■□□□ 1.19
HLA-C-201ENST00000376228 ABCB4P21439 1286 aa22.48■■□□□ 1.19
HLA-C-201ENST00000376228 CLLU1OSQ5K130 101 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms