RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 GRIK3Q13003 919 aa11.8□□□□□ -0.52
PDPN-202ENST00000376057 ZNF268Q14587 947 aaPredicted RBP11.8□□□□□ -0.52
PDPN-202ENST00000376057 GLE1Q53GS7 698 aaKnown RBP11.8□□□□□ -0.52
PDPN-202ENST00000376057 SCARA5Q6ZMJ2 495 aa11.8□□□□□ -0.52
PDPN-202ENST00000376057 ECHDC2Q86YB7 292 aa11.8□□□□□ -0.52
PDPN-202ENST00000376057 NIPA2Q8N8Q9 360 aa11.8□□□□□ -0.52
PDPN-202ENST00000376057 COG1Q8WTW3 980 aa11.8□□□□□ -0.52
PDPN-202ENST00000376057 MMS19Q96T76 1030 aa11.8□□□□□ -0.52
PDPN-202ENST00000376057 TRPV6Q9H1D0 765 aa11.8□□□□□ -0.52
PDPN-202ENST00000376057 TSPYL2Q9H2G4 693 aaPredicted RBP11.8□□□□□ -0.52
PDPN-202ENST00000376057 RNF216Q9NWF9 866 aaPredicted RBP11.8□□□□□ -0.52
PDPN-202ENST00000376057 C9IYK1 514 aa11.8□□□□□ -0.52
PDPN-202ENST00000376057 GABRDO14764 452 aa11.8□□□□□ -0.52
PDPN-202ENST00000376057 GHRP10912 638 aa11.8□□□□□ -0.52
PDPN-202ENST00000376057 CCL5P13501 91 aa11.8□□□□□ -0.52
PDPN-202ENST00000376057 RAP1GAPP47736 663 aa11.8□□□□□ -0.52
PDPN-202ENST00000376057 DNAAF5Q86Y56 855 aa11.8□□□□□ -0.52
PDPN-202ENST00000376057 UBL4BQ8N7F7 174 aa11.8□□□□□ -0.52
PDPN-202ENST00000376057 C3orf20Q8ND61 904 aa11.8□□□□□ -0.52
PDPN-202ENST00000376057 LRRN4CLQ8ND94 238 aa11.8□□□□□ -0.52
PDPN-202ENST00000376057 FNIP1Q8TF40 1166 aa11.8□□□□□ -0.52
PDPN-202ENST00000376057 KBTBD7Q8WVZ9 684 aa11.8□□□□□ -0.52
PDPN-202ENST00000376057 TWNKQ96RR1 684 aa11.8□□□□□ -0.52
PDPN-202ENST00000376057 PCDHA3Q9Y5H8 950 aa11.8□□□□□ -0.52
PDPN-202ENST00000376057 NCK2O43639 380 aa11.79□□□□□ -0.52
PDPN-202ENST00000376057 SRGAP2O75044 1071 aa11.79□□□□□ -0.52
PDPN-202ENST00000376057 RRM1P23921 792 aa11.79□□□□□ -0.52
PDPN-202ENST00000376057 SCNN1AP37088 669 aa11.79□□□□□ -0.52
PDPN-202ENST00000376057 GPD2P43304 727 aa11.79□□□□□ -0.52
PDPN-202ENST00000376057 PEX5P50542 639 aa11.79□□□□□ -0.52
PDPN-202ENST00000376057 SNX16P57768 344 aa11.79□□□□□ -0.52
PDPN-202ENST00000376057 MBTPS1Q14703 1052 aa11.79□□□□□ -0.52
PDPN-202ENST00000376057 PKN2Q16513 984 aaKnown RBP11.79□□□□□ -0.52
PDPN-202ENST00000376057 SLC24A5Q71RS6 500 aa11.79□□□□□ -0.52
PDPN-202ENST00000376057 LRRC8DQ7L1W4 858 aa11.79□□□□□ -0.52
PDPN-202ENST00000376057 ANKLE1Q8NAG6 615 aa11.79□□□□□ -0.52
PDPN-202ENST00000376057 APPL2Q8NEU8 664 aa11.79□□□□□ -0.52
PDPN-202ENST00000376057 SH3TC2Q8TF17 1288 aa11.79□□□□□ -0.52
PDPN-202ENST00000376057 RSAD1Q9HA92 442 aa11.79□□□□□ -0.52
PDPN-202ENST00000376057 KLK14Q9P0G3 267 aa11.79□□□□□ -0.52
PDPN-202ENST00000376057 SNX9Q9Y5X1 595 aa11.79□□□□□ -0.52
PDPN-202ENST00000376057 TMEM191CA6NGB0 347 aa11.79□□□□□ -0.52
PDPN-202ENST00000376057 PDE2AO00408 941 aaPredicted RBP11.79□□□□□ -0.52
PDPN-202ENST00000376057 PPEF2O14830 753 aa11.79□□□□□ -0.52
PDPN-202ENST00000376057 PROSCO94903 275 aa11.79□□□□□ -0.52
PDPN-202ENST00000376057 UPP1Q16831 310 aa11.79□□□□□ -0.52
PDPN-202ENST00000376057 ERICH1Q86X53 443 aa11.79□□□□□ -0.52
PDPN-202ENST00000376057 FEZF2Q8TBJ5 459 aa11.79□□□□□ -0.52
PDPN-202ENST00000376057 NAP1L3Q99457 506 aaPredicted RBP11.79□□□□□ -0.52
PDPN-202ENST00000376057 ADAM2Q99965 735 aa11.79□□□□□ -0.52
PDPN-202ENST00000376057 MRPL45Q9BRJ2 306 aaKnown RBP11.79□□□□□ -0.52
PDPN-202ENST00000376057 APOL6Q9BWW8 343 aa11.79□□□□□ -0.52
PDPN-202ENST00000376057 RAB21Q9UL25 225 aa11.79□□□□□ -0.52
PDPN-202ENST00000376057 SPTLC1O15269 473 aa11.78□□□□□ -0.52
PDPN-202ENST00000376057 MICAL2O94851 1124 aa11.78□□□□□ -0.52
PDPN-202ENST00000376057 CALCAP01258 141 aa11.78□□□□□ -0.52
PDPN-202ENST00000376057 CYP11A1P05108 521 aa11.78□□□□□ -0.52
PDPN-202ENST00000376057 ACAP1Q15027 740 aa11.78□□□□□ -0.52
PDPN-202ENST00000376057 PPP2R5EQ16537 467 aa11.78□□□□□ -0.52
PDPN-202ENST00000376057 ERCC6LQ2NKX8 1250 aa11.78□□□□□ -0.52
PDPN-202ENST00000376057 LRRC38Q5VT99 294 aa11.78□□□□□ -0.52
PDPN-202ENST00000376057 DENND1BQ6P3S1 775 aa11.78□□□□□ -0.52
PDPN-202ENST00000376057 ARCQ7LC44 396 aa11.78□□□□□ -0.52
PDPN-202ENST00000376057 ZDHHC17Q8IUH5 632 aa11.78□□□□□ -0.52
PDPN-202ENST00000376057 SPATA4Q8NEY3 305 aa11.78□□□□□ -0.52
PDPN-202ENST00000376057 HEXIM2Q96MH2 286 aaKnown RBP11.78□□□□□ -0.52
PDPN-202ENST00000376057 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.78□□□□□ -0.52
PDPN-202ENST00000376057 HMGXB4Q9UGU5 601 aa11.78□□□□□ -0.52
PDPN-202ENST00000376057 IP6K2Q9UHH9 426 aa11.78□□□□□ -0.52
PDPN-202ENST00000376057 TDRD15B5MCY1 1934 aaKnown RBP11.78□□□□□ -0.52
PDPN-202ENST00000376057 TSC2P49815 1807 aa11.78□□□□□ -0.52
PDPN-202ENST00000376057 ARHGEF37A1IGU5 675 aa11.78□□□□□ -0.52
PDPN-202ENST00000376057 SIGLEC16A6NMB1 481 aa11.78□□□□□ -0.52
PDPN-202ENST00000376057 TMEM189-UBE2V1I3L0A0 370 aa11.78□□□□□ -0.52
PDPN-202ENST00000376057 ZNF185O15231 689 aa11.78□□□□□ -0.52
PDPN-202ENST00000376057 HUS1O60921 280 aa11.78□□□□□ -0.52
PDPN-202ENST00000376057 CXCL10P02778 98 aa11.78□□□□□ -0.52
PDPN-202ENST00000376057 H2AFXP16104 143 aaPredicted RBP11.78□□□□□ -0.52
PDPN-202ENST00000376057 MCM3P25205 808 aa11.78□□□□□ -0.52
PDPN-202ENST00000376057 PLEKHG4Q58EX7 1191 aa11.78□□□□□ -0.52
PDPN-202ENST00000376057 GLRA4Q5JXX5 417 aa11.78□□□□□ -0.52
PDPN-202ENST00000376057 WDR93Q6P2C0 686 aa11.78□□□□□ -0.52
PDPN-202ENST00000376057 MMS22LQ6ZRQ5 1243 aa11.78□□□□□ -0.52
PDPN-202ENST00000376057 ARMC5Q96C12 935 aa11.78□□□□□ -0.52
PDPN-202ENST00000376057 MCRS1Q96EZ8 462 aa11.78□□□□□ -0.52
PDPN-202ENST00000376057 TNIP3Q96KP6 325 aa11.78□□□□□ -0.52
PDPN-202ENST00000376057 GAD1Q99259 594 aa11.78□□□□□ -0.52
PDPN-202ENST00000376057 OSBPL7Q9BZF2 842 aa11.78□□□□□ -0.52
PDPN-202ENST00000376057 KANSL3Q9P2N6 904 aa11.78□□□□□ -0.52
PDPN-202ENST00000376057 PUF60Q9UHX1 559 aaKnown RBP11.78□□□□□ -0.52
PDPN-202ENST00000376057 CCDC188H7C350 402 aa11.78□□□□□ -0.52
PDPN-202ENST00000376057 MYCNP04198 464 aaPredicted RBP11.78□□□□□ -0.52
PDPN-202ENST00000376057 COMTP21964 271 aa11.78□□□□□ -0.52
PDPN-202ENST00000376057 GNL1P36915 607 aaPredicted RBP11.78□□□□□ -0.52
PDPN-202ENST00000376057 MLH1P40692 756 aa11.78□□□□□ -0.52
PDPN-202ENST00000376057 LHX1P48742 406 aa11.78□□□□□ -0.52
PDPN-202ENST00000376057 MNX1P50219 401 aaPredicted RBP11.78□□□□□ -0.52
PDPN-202ENST00000376057 CCDC181Q5TID7 509 aa11.78□□□□□ -0.52
PDPN-202ENST00000376057 RTN4RL1Q86UN2 441 aaPredicted RBP11.78□□□□□ -0.52
PDPN-202ENST00000376057 C1orf131Q8NDD1 294 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms