RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 GOLGA8RI6L899 631 aa14.88□□□□□ -0.03
CLCNKA-202ENST00000375692 SESN3P58005 492 aa14.88□□□□□ -0.03
CLCNKA-202ENST00000375692 PDIA2Q13087 525 aaKnown RBP14.88□□□□□ -0.03
CLCNKA-202ENST00000375692 VGLL4Q14135 290 aa14.88□□□□□ -0.03
CLCNKA-202ENST00000375692 RGS9BPQ6ZS82 235 aa14.88□□□□□ -0.03
CLCNKA-202ENST00000375692 CPXCR1Q8N123 301 aa14.88□□□□□ -0.03
CLCNKA-202ENST00000375692 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.88□□□□□ -0.03
CLCNKA-202ENST00000375692 WNK4Q96J92 1243 aa14.88□□□□□ -0.03
CLCNKA-202ENST00000375692 KLF6Q99612 283 aaPredicted RBP14.88□□□□□ -0.03
CLCNKA-202ENST00000375692 ZFP69BQ9UJL9 534 aa14.88□□□□□ -0.03
CLCNKA-202ENST00000375692 SMG5Q9UPR3 1016 aaKnown RBP14.88□□□□□ -0.03
CLCNKA-202ENST00000375692 CCNE2O96020 404 aa14.88□□□□□ -0.03
CLCNKA-202ENST00000375692 IFNB1P01574 187 aa14.88□□□□□ -0.03
CLCNKA-202ENST00000375692 EIF2AK2P19525 551 aaKnown RBP14.88□□□□□ -0.03
CLCNKA-202ENST00000375692 ADRA1DP25100 572 aa14.88□□□□□ -0.03
CLCNKA-202ENST00000375692 MCCD1P59942 119 aaPredicted RBP14.88□□□□□ -0.03
CLCNKA-202ENST00000375692 SATB1Q01826 763 aa14.88□□□□□ -0.03
CLCNKA-202ENST00000375692 DMP1Q13316 513 aaPredicted RBP14.88□□□□□ -0.03
CLCNKA-202ENST00000375692 LIN9Q5TKA1 542 aa14.88□□□□□ -0.03
CLCNKA-202ENST00000375692 TDRPQ86YL5 185 aa14.88□□□□□ -0.03
CLCNKA-202ENST00000375692 ZNF280CQ8ND82 737 aa14.88□□□□□ -0.03
CLCNKA-202ENST00000375692 RFWD2Q8NHY2 731 aa14.88□□□□□ -0.03
CLCNKA-202ENST00000375692 ASAP3Q8TDY4 903 aa14.88□□□□□ -0.03
CLCNKA-202ENST00000375692 CLMNQ96JQ2 1002 aa14.88□□□□□ -0.03
CLCNKA-202ENST00000375692 FBXL18Q96ME1 805 aa14.88□□□□□ -0.03
CLCNKA-202ENST00000375692 MIPEPQ99797 713 aa14.88□□□□□ -0.03
CLCNKA-202ENST00000375692 CYLDQ9NQC7 956 aa14.88□□□□□ -0.03
CLCNKA-202ENST00000375692 KANSL3Q9P2N6 904 aa14.88□□□□□ -0.03
CLCNKA-202ENST00000375692 PPP2R3BQ9Y5P8 575 aa14.88□□□□□ -0.03
CLCNKA-202ENST00000375692 LIN7AO14910 233 aaPredicted RBP14.87□□□□□ -0.03
CLCNKA-202ENST00000375692 HNRNPDLO14979 420 aaKnown RBP14.87□□□□□ -0.03
CLCNKA-202ENST00000375692 MYCLP12524 364 aaPredicted RBP14.87□□□□□ -0.03
CLCNKA-202ENST00000375692 HSD17B4P51659 736 aa14.87□□□□□ -0.03
CLCNKA-202ENST00000375692 BACE1P56817 501 aa14.87□□□□□ -0.03
CLCNKA-202ENST00000375692 IRX1P78414 480 aaPredicted RBP14.87□□□□□ -0.03
CLCNKA-202ENST00000375692 KHDC1Q4VXA5 237 aaKnown RBP14.87□□□□□ -0.03
CLCNKA-202ENST00000375692 TXNRD3NBQ6F5E7 133 aa14.87□□□□□ -0.03
CLCNKA-202ENST00000375692 USP50Q70EL3 339 aaPredicted RBP14.87□□□□□ -0.03
CLCNKA-202ENST00000375692 ANO5Q75V66 913 aa14.87□□□□□ -0.03
CLCNKA-202ENST00000375692 NLRX1Q86UT6 975 aa14.87□□□□□ -0.03
CLCNKA-202ENST00000375692 TRIM11Q96F44 468 aa14.87□□□□□ -0.03
CLCNKA-202ENST00000375692 TMEM121Q9BTD3 319 aa14.87□□□□□ -0.03
CLCNKA-202ENST00000375692 LYPLA2O95372 231 aa14.87□□□□□ -0.03
CLCNKA-202ENST00000375692 ATP4AP20648 1035 aa14.87□□□□□ -0.03
CLCNKA-202ENST00000375692 SSTR1P30872 391 aa14.87□□□□□ -0.03
CLCNKA-202ENST00000375692 GPX6P59796 221 aa14.87□□□□□ -0.03
CLCNKA-202ENST00000375692 NOMO3P69849 1222 aa14.87□□□□□ -0.03
CLCNKA-202ENST00000375692 PLCB3Q01970 1234 aa14.87□□□□□ -0.03
CLCNKA-202ENST00000375692 MAP1SQ66K74 1059 aaPredicted RBP14.87□□□□□ -0.03
CLCNKA-202ENST00000375692 SCARA3Q6AZY7 606 aa14.87□□□□□ -0.03
CLCNKA-202ENST00000375692 TMEM270Q6UE05 265 aa14.87□□□□□ -0.03
CLCNKA-202ENST00000375692 GPD1LQ8N335 351 aa14.87□□□□□ -0.03
CLCNKA-202ENST00000375692 RPAP3Q9H6T3 665 aaPredicted RBP14.87□□□□□ -0.03
CLCNKA-202ENST00000375692 SAE1Q9UBE0 346 aaPredicted RBP14.87□□□□□ -0.03
CLCNKA-202ENST00000375692 UBIAD1Q9Y5Z9 338 aa14.87□□□□□ -0.03
CLCNKA-202ENST00000375692 IVNS1ABPQ9Y6Y0 642 aa14.87□□□□□ -0.03
CLCNKA-202ENST00000375692 ALOX15BO15296 676 aa14.86□□□□□ -0.03
CLCNKA-202ENST00000375692 MAP3K13O43283 966 aa14.86□□□□□ -0.03
CLCNKA-202ENST00000375692 HLA-DRAP01903 254 aa14.86□□□□□ -0.03
CLCNKA-202ENST00000375692 KRT1P04264 644 aa14.86□□□□□ -0.03
CLCNKA-202ENST00000375692 TNNI1P19237 187 aa14.86□□□□□ -0.03
CLCNKA-202ENST00000375692 GTF2H1P32780 548 aa14.86□□□□□ -0.03
CLCNKA-202ENST00000375692 PIK3CAP42336 1068 aa14.86□□□□□ -0.03
CLCNKA-202ENST00000375692 CTCFP49711 727 aaPredicted RBP14.86□□□□□ -0.03
CLCNKA-202ENST00000375692 PSMC5P62195 406 aa14.86□□□□□ -0.03
CLCNKA-202ENST00000375692 TFDP1Q14186 410 aa14.86□□□□□ -0.03
CLCNKA-202ENST00000375692 WDR72Q3MJ13 1102 aa14.86□□□□□ -0.03
CLCNKA-202ENST00000375692 BRDTQ58F21 947 aaPredicted RBP14.86□□□□□ -0.03
CLCNKA-202ENST00000375692 DSTYKQ6XUX3 929 aa14.86□□□□□ -0.03
CLCNKA-202ENST00000375692 ENOSF1Q7L5Y1 443 aa14.86□□□□□ -0.03
CLCNKA-202ENST00000375692 APBB1IPQ7Z5R6 666 aaPredicted RBP14.86□□□□□ -0.03
CLCNKA-202ENST00000375692 CLNKQ7Z7G1 428 aa14.86□□□□□ -0.03
CLCNKA-202ENST00000375692 C4orf19Q8IY42 314 aa14.86□□□□□ -0.03
CLCNKA-202ENST00000375692 ALLCQ8N6M5 410 aa14.86□□□□□ -0.03
CLCNKA-202ENST00000375692 ENDOVQ8N8Q3 282 aaKnown RBP14.86□□□□□ -0.03
CLCNKA-202ENST00000375692 CLEC4DQ8WXI8 215 aa14.86□□□□□ -0.03
CLCNKA-202ENST00000375692 CDCA5Q96FF9 252 aa14.86□□□□□ -0.03
CLCNKA-202ENST00000375692 BICD1Q96G01 975 aa14.86□□□□□ -0.03
CLCNKA-202ENST00000375692 TTC25Q96NG3 672 aa14.86□□□□□ -0.03
CLCNKA-202ENST00000375692 SLITRK1Q96PX8 696 aa14.86□□□□□ -0.03
CLCNKA-202ENST00000375692 TAAR1Q96RJ0 339 aa14.86□□□□□ -0.03
CLCNKA-202ENST00000375692 CLEC11AQ9Y240 323 aa14.86□□□□□ -0.03
CLCNKA-202ENST00000375692 PCDHB4Q9Y5E5 795 aa14.86□□□□□ -0.03
CLCNKA-202ENST00000375692 SNCAIPQ9Y6H5 919 aa14.86□□□□□ -0.03
CLCNKA-202ENST00000375692 ZNF536O15090 1300 aa14.86□□□□□ -0.03
CLCNKA-202ENST00000375692 PTPRJQ12913 1337 aa14.86□□□□□ -0.03
CLCNKA-202ENST00000375692 SPDYE5A6NIY4 337 aa14.86□□□□□ -0.03
CLCNKA-202ENST00000375692 ATP6V1C1P21283 382 aa14.86□□□□□ -0.03
CLCNKA-202ENST00000375692 ACO1P21399 889 aaKnown RBP14.86□□□□□ -0.03
CLCNKA-202ENST00000375692 PTPN4P29074 926 aa14.86□□□□□ -0.03
CLCNKA-202ENST00000375692 RASSF2P50749 326 aa14.86□□□□□ -0.03
CLCNKA-202ENST00000375692 CCDC142Q17RM4 750 aa14.86□□□□□ -0.03
CLCNKA-202ENST00000375692 CTC1Q2NKJ3 1217 aa14.86□□□□□ -0.03
CLCNKA-202ENST00000375692 WDR44Q5JSH3 913 aa14.86□□□□□ -0.03
CLCNKA-202ENST00000375692 WASHC2DQ5SRD0 308 aa14.86□□□□□ -0.03
CLCNKA-202ENST00000375692 THEMIS2Q5TEJ8 643 aa14.86□□□□□ -0.03
CLCNKA-202ENST00000375692 SPIRE2Q8WWL2 714 aa14.86□□□□□ -0.03
CLCNKA-202ENST00000375692 PRR11Q96HE9 360 aaPredicted RBP14.86□□□□□ -0.03
CLCNKA-202ENST00000375692 SYT15Q9BQS2 421 aa14.86□□□□□ -0.03
CLCNKA-202ENST00000375692 CADM1Q9BY67 442 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms