RNA–Protein interactions for RNA: ENST00000375405.7

SCN1A-202, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,097 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-202ENST00000375405 DHX15O43143 795 aaKnown RBP4.83□□□□□ -1.64
SCN1A-202ENST00000375405 MGRN1O60291 552 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 USP1O94782 785 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 AMD1P17707 334 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 RPA1P27694 616 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 CCND2P30279 289 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 RRM2P31350 389 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 GRK4P32298 578 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 CCT3P49368 545 aaKnown RBP4.83□□□□□ -1.64
SCN1A-202ENST00000375405 SSTP61278 116 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 CSTF3Q12996 717 aaKnown RBP4.83□□□□□ -1.64
SCN1A-202ENST00000375405 MTX1Q13505 466 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 C11orf91Q3C1V1 193 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 USP41Q3LFD5 358 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 PPP1R15BQ5SWA1 713 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 P3H2Q8IVL5 708 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 SLC22A8Q8TCC7 542 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 SCFD1Q8WVM8 642 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 UBXN10Q96LJ8 280 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 GPR63Q9BZJ6 419 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 TUBB1Q9H4B7 451 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 CCSER2Q9H7U1 834 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 RASSF1Q9NS23 344 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 KLHL20Q9Y2M5 609 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 LMTK3Q96Q04 1460 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 MYOM3Q5VTT5 1437 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 NDUFS3O75489 264 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 KCNH1O95259 989 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 PLGP00747 810 aaPredicted RBP4.83□□□□□ -1.64
SCN1A-202ENST00000375405 GNGT1P63211 74 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 TMPRSS15P98073 1019 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 RASSF7Q02833 373 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 TOB2Q14106 344 aaPredicted RBP4.83□□□□□ -1.64
SCN1A-202ENST00000375405 EFR3AQ14156 821 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 PCSK7Q16549 785 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 DDR2Q16832 855 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 IFNEQ86WN2 208 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 MAPKAPK5Q8IW41 473 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 ZNF579Q8NAF0 562 aaKnown RBP4.83□□□□□ -1.64
SCN1A-202ENST00000375405 UCMAQ8WVF2 138 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 CASP10Q92851 521 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 MCRS1Q96EZ8 462 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 ESYT1Q9BSJ8 1104 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 TMEM168Q9H0V1 697 aa4.83□□□□□ -1.64
SCN1A-202ENST00000375405 MRPL11Q9Y3B7 192 aaKnown RBP4.83□□□□□ -1.64
SCN1A-202ENST00000375405 CENPXA8MT69 81 aa4.82□□□□□ -1.64
SCN1A-202ENST00000375405 ZNF879B4DU55 563 aa4.82□□□□□ -1.64
SCN1A-202ENST00000375405 TEX46H3BTG2 121 aa4.82□□□□□ -1.64
SCN1A-202ENST00000375405 H7C0S8 307 aa4.82□□□□□ -1.64
SCN1A-202ENST00000375405 DNALI1O14645 258 aaPredicted RBP4.82□□□□□ -1.64
SCN1A-202ENST00000375405 MAGEB3O15480 346 aa4.82□□□□□ -1.64
SCN1A-202ENST00000375405 NR2F1P10589 423 aa4.82□□□□□ -1.64
SCN1A-202ENST00000375405 GSTM2P28161 218 aa4.82□□□□□ -1.64
SCN1A-202ENST00000375405 RGS6P49758 472 aa4.82□□□□□ -1.64
SCN1A-202ENST00000375405 ANXA11P50995 505 aaKnown RBP4.82□□□□□ -1.64
SCN1A-202ENST00000375405 AKR1D1P51857 326 aa4.82□□□□□ -1.64
SCN1A-202ENST00000375405 DMPKQ09013 629 aa4.82□□□□□ -1.64
SCN1A-202ENST00000375405 GPS1Q13098 491 aa4.82□□□□□ -1.64
SCN1A-202ENST00000375405 EIF4A2Q14240 407 aaKnown RBP4.82□□□□□ -1.64
SCN1A-202ENST00000375405 TRIM65Q6PJ69 517 aa4.82□□□□□ -1.64
SCN1A-202ENST00000375405 CCNI2Q6ZMN8 369 aaPredicted RBP4.82□□□□□ -1.64
SCN1A-202ENST00000375405 RASGEF1CQ8N431 466 aa4.82□□□□□ -1.64
SCN1A-202ENST00000375405 GPRASP2Q96D09 838 aa4.82□□□□□ -1.64
SCN1A-202ENST00000375405 UBXN6Q9BZV1 441 aa4.82□□□□□ -1.64
SCN1A-202ENST00000375405 YIPF3Q9GZM5 350 aa4.82□□□□□ -1.64
SCN1A-202ENST00000375405 BLZF1Q9H2G9 400 aa4.82□□□□□ -1.64
SCN1A-202ENST00000375405 IL1RL2Q9HB29 575 aa4.82□□□□□ -1.64
SCN1A-202ENST00000375405 MRM3Q9HC36 420 aaKnown RBP4.82□□□□□ -1.64
SCN1A-202ENST00000375405 SMURF1Q9HCE7 757 aa4.82□□□□□ -1.64
SCN1A-202ENST00000375405 HIF1ANQ9NWT6 349 aa4.82□□□□□ -1.64
SCN1A-202ENST00000375405 MSH4O15457 936 aa4.82□□□□□ -1.64
SCN1A-202ENST00000375405 ATP5HO75947 161 aa4.82□□□□□ -1.64
SCN1A-202ENST00000375405 APOC1P02654 83 aa4.82□□□□□ -1.64
SCN1A-202ENST00000375405 RLN1P04808 185 aa4.82□□□□□ -1.64
SCN1A-202ENST00000375405 CSF1RP07333 972 aa4.82□□□□□ -1.64
SCN1A-202ENST00000375405 PDGFRBP09619 1106 aa4.82□□□□□ -1.64
SCN1A-202ENST00000375405 CHMLP26374 656 aa4.82□□□□□ -1.64
SCN1A-202ENST00000375405 RAB25P57735 213 aa4.82□□□□□ -1.64
SCN1A-202ENST00000375405 C1QBPQ07021 282 aaKnown RBP4.82□□□□□ -1.64
SCN1A-202ENST00000375405 ZSCAN26Q16670 478 aa4.82□□□□□ -1.64
SCN1A-202ENST00000375405 PUS10Q3MIT2 529 aaKnown RBP4.82□□□□□ -1.64
SCN1A-202ENST00000375405 IZUMO3Q5VZ72 239 aa4.82□□□□□ -1.64
SCN1A-202ENST00000375405 P4HA3Q7Z4N8 544 aa4.82□□□□□ -1.64
SCN1A-202ENST00000375405 ARHGEF19Q8IW93 802 aa4.82□□□□□ -1.64
SCN1A-202ENST00000375405 LNX2Q8N448 690 aa4.82□□□□□ -1.64
SCN1A-202ENST00000375405 KLHL23Q8NBE8 558 aa4.82□□□□□ -1.64
SCN1A-202ENST00000375405 ZNF671Q8TAW3 534 aa4.82□□□□□ -1.64
SCN1A-202ENST00000375405 PYROXD1Q8WU10 500 aa4.82□□□□□ -1.64
SCN1A-202ENST00000375405 KBTBD7Q8WVZ9 684 aa4.82□□□□□ -1.64
SCN1A-202ENST00000375405 DNAJC9Q8WXX5 260 aa4.82□□□□□ -1.64
SCN1A-202ENST00000375405 STAMBPL1Q96FJ0 436 aa4.82□□□□□ -1.64
SCN1A-202ENST00000375405 MED8Q96G25 268 aa4.82□□□□□ -1.64
SCN1A-202ENST00000375405 TRIM51Q9BSJ1 452 aa4.82□□□□□ -1.64
SCN1A-202ENST00000375405 BRIP1Q9BX63 1249 aa4.82□□□□□ -1.64
SCN1A-202ENST00000375405 CCDC86Q9H6F5 360 aaKnown RBP4.82□□□□□ -1.64
SCN1A-202ENST00000375405 CYP3A43Q9HB55 503 aa4.82□□□□□ -1.64
SCN1A-202ENST00000375405 PANK4Q9NVE7 773 aa4.82□□□□□ -1.64
SCN1A-202ENST00000375405 POU2F3Q9UKI9 436 aa4.82□□□□□ -1.64
SCN1A-202ENST00000375405 PCDHB11Q9Y5F2 797 aa4.82□□□□□ -1.64
SCN1A-202ENST00000375405 ABCC4O15439 1325 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms