RNA–Protein interactions for RNA: ENST00000375001.7

COL15A1-201, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL15A1, Length 5,496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-201ENST00000375001 SYTL2Q9HCH5 934 aa20.64■□□□□ 0.89
COL15A1-201ENST00000375001 DCDC2Q9UHG0 476 aa20.64■□□□□ 0.89
COL15A1-201ENST00000375001 HPS5Q9UPZ3 1129 aa20.64■□□□□ 0.89
COL15A1-201ENST00000375001 HECW2Q9P2P5 1572 aa20.64■□□□□ 0.89
COL15A1-201ENST00000375001 NMT1P30419 496 aaKnown RBP20.64■□□□□ 0.89
COL15A1-201ENST00000375001 GEMIN4P57678 1058 aaKnown RBP20.64■□□□□ 0.89
COL15A1-201ENST00000375001 FUT11Q495W5 492 aa20.64■□□□□ 0.89
COL15A1-201ENST00000375001 FAM84BQ96KN1 310 aaPredicted RBP20.64■□□□□ 0.89
COL15A1-201ENST00000375001 C7orf25Q9BPX7 421 aa20.64■□□□□ 0.89
COL15A1-201ENST00000375001 ECSITQ9BQ95 431 aa20.64■□□□□ 0.89
COL15A1-201ENST00000375001 TRIM49D1C9J1S8 452 aa20.63■□□□□ 0.89
COL15A1-201ENST00000375001 SHCBP1Q8NEM2 672 aa20.63■□□□□ 0.89
COL15A1-201ENST00000375001 CD209Q9NNX6 404 aa20.63■□□□□ 0.89
COL15A1-201ENST00000375001 PPP1R3GB7ZBB8 358 aa20.63■□□□□ 0.89
COL15A1-201ENST00000375001 STX5Q13190 355 aa20.63■□□□□ 0.89
COL15A1-201ENST00000375001 TSPAN17Q96FV3 270 aa20.63■□□□□ 0.89
COL15A1-201ENST00000375001 EIF2AK1Q9BQI3 630 aaKnown RBP20.63■□□□□ 0.89
COL15A1-201ENST00000375001 COA1Q9GZY4 146 aa20.63■□□□□ 0.89
COL15A1-201ENST00000375001 ZHX2Q9Y6X8 837 aa20.63■□□□□ 0.89
COL15A1-201ENST00000375001 NFX1Q12986 1120 aaKnown RBP20.63■□□□□ 0.89
COL15A1-201ENST00000375001 ZCCHC7Q8N3Z6 543 aaKnown RBP20.63■□□□□ 0.89
COL15A1-201ENST00000375001 HES6Q96HZ4 224 aa20.63■□□□□ 0.89
COL15A1-201ENST00000375001 PABPC3Q9H361 631 aaKnown RBP20.63■□□□□ 0.89
COL15A1-201ENST00000375001 SPHKAPQ2M3C7 1700 aa20.63■□□□□ 0.89
COL15A1-201ENST00000375001 KLRC1P26715 233 aa20.63■□□□□ 0.89
COL15A1-201ENST00000375001 ANKS1AQ92625 1134 aa20.63■□□□□ 0.89
COL15A1-201ENST00000375001 L1RE1Q9UN81 338 aa20.63■□□□□ 0.89
COL15A1-201ENST00000375001 MYMKA6NI61 221 aa20.62■□□□□ 0.89
COL15A1-201ENST00000375001 SPAG6O75602 509 aa20.62■□□□□ 0.89
COL15A1-201ENST00000375001 ADARP55265 1226 aaKnown RBP20.62■□□□□ 0.89
COL15A1-201ENST00000375001 COG2Q14746 738 aa20.62■□□□□ 0.89
COL15A1-201ENST00000375001 ARMC4Q5T2S8 1044 aa20.62■□□□□ 0.89
COL15A1-201ENST00000375001 MTDHQ86UE4 582 aaKnown RBP20.62■□□□□ 0.89
COL15A1-201ENST00000375001 MAGEB18Q96M61 343 aa20.62■□□□□ 0.89
COL15A1-201ENST00000375001 UNC13BO14795 1591 aa20.62■□□□□ 0.89
COL15A1-201ENST00000375001 RNF17Q9BXT8 1623 aaKnown RBP20.62■□□□□ 0.89
COL15A1-201ENST00000375001 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.62■□□□□ 0.89
COL15A1-201ENST00000375001 TNFAIP2Q03169 654 aa20.62■□□□□ 0.89
COL15A1-201ENST00000375001 APEX2Q9UBZ4 518 aa20.62■□□□□ 0.89
COL15A1-201ENST00000375001 PRG3Q9Y2Y8 225 aaPredicted RBP20.62■□□□□ 0.89
COL15A1-201ENST00000375001 ALKQ9UM73 1620 aa20.62■□□□□ 0.89
COL15A1-201ENST00000375001 ZNF235Q14590 738 aa20.62■□□□□ 0.89
COL15A1-201ENST00000375001 NANOGNBQ7Z5D8 188 aa20.62■□□□□ 0.89
COL15A1-201ENST00000375001 THEM5Q8N1Q8 247 aa20.62■□□□□ 0.89
COL15A1-201ENST00000375001 GIMAP8Q8ND71 665 aaPredicted RBP20.62■□□□□ 0.89
COL15A1-201ENST00000375001 TMBIM4Q9HC24 238 aa20.62■□□□□ 0.89
COL15A1-201ENST00000375001 TOPORSQ9NS56 1045 aaPredicted RBP20.62■□□□□ 0.89
COL15A1-201ENST00000375001 RBAKQ9NYW8 714 aaPredicted RBP20.62■□□□□ 0.89
COL15A1-201ENST00000375001 NPHP4O75161 1426 aaPredicted RBP20.62■□□□□ 0.89
COL15A1-201ENST00000375001 CYP19A1P11511 503 aaPredicted RBP20.62■□□□□ 0.89
COL15A1-201ENST00000375001 RBBP8Q99708 897 aa20.62■□□□□ 0.89
COL15A1-201ENST00000375001 KPNA4O00629 521 aaPredicted RBP20.61■□□□□ 0.89
COL15A1-201ENST00000375001 BCL10O95999 233 aa20.61■□□□□ 0.89
COL15A1-201ENST00000375001 LCP1P13796 627 aa20.61■□□□□ 0.89
COL15A1-201ENST00000375001 GPD1LQ8N335 351 aa20.61■□□□□ 0.89
COL15A1-201ENST00000375001 ZNF341Q9BYN7 854 aa20.61■□□□□ 0.89
COL15A1-201ENST00000375001 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.61■□□□□ 0.89
COL15A1-201ENST00000375001 ALG6Q9Y672 507 aa20.61■□□□□ 0.89
COL15A1-201ENST00000375001 TULP4Q9NRJ4 1543 aa20.61■□□□□ 0.89
COL15A1-201ENST00000375001 SUPT3HB4E1H0 165 aa20.61■□□□□ 0.89
COL15A1-201ENST00000375001 PDXKO00764 312 aa20.61■□□□□ 0.89
COL15A1-201ENST00000375001 PDIA5Q14554 519 aa20.61■□□□□ 0.89
COL15A1-201ENST00000375001 RCSD1Q6JBY9 416 aa20.61■□□□□ 0.89
COL15A1-201ENST00000375001 WDR93Q6P2C0 686 aa20.61■□□□□ 0.89
COL15A1-201ENST00000375001 ASAP3Q8TDY4 903 aa20.61■□□□□ 0.89
COL15A1-201ENST00000375001 LRRC39Q96DD0 335 aa20.61■□□□□ 0.89
COL15A1-201ENST00000375001 METTL5Q9NRN9 209 aaKnown RBP20.61■□□□□ 0.89
COL15A1-201ENST00000375001 ARHGEF40Q8TER5 1519 aa20.61■□□□□ 0.89
COL15A1-201ENST00000375001 NEDD1Q8NHV4 660 aa20.61■□□□□ 0.89
COL15A1-201ENST00000375001 USP33Q8TEY7 942 aa20.61■□□□□ 0.89
COL15A1-201ENST00000375001 RGL1Q9NZL6 768 aa20.61■□□□□ 0.89
COL15A1-201ENST00000375001 PDZK1P1A8MUH7 402 aa20.61■□□□□ 0.89
COL15A1-201ENST00000375001 COILP38432 576 aaPredicted RBP20.61■□□□□ 0.89
COL15A1-201ENST00000375001 ERVK-24P63145 666 aa20.61■□□□□ 0.89
COL15A1-201ENST00000375001 SGSM1Q2NKQ1 1148 aa20.61■□□□□ 0.89
COL15A1-201ENST00000375001 SH3BP5LQ7L8J4 393 aa20.61■□□□□ 0.89
COL15A1-201ENST00000375001 C18orf8Q96DM3 657 aa20.61■□□□□ 0.89
COL15A1-201ENST00000375001 MCRS1Q96EZ8 462 aa20.61■□□□□ 0.89
COL15A1-201ENST00000375001 LXNQ9BS40 222 aa20.61■□□□□ 0.89
COL15A1-201ENST00000375001 TMEM51Q9NW97 253 aa20.61■□□□□ 0.89
COL15A1-201ENST00000375001 ADGRA3Q8IWK6 1321 aa20.61■□□□□ 0.89
COL15A1-201ENST00000375001 A8MXQ7 604 aa20.6■□□□□ 0.89
COL15A1-201ENST00000375001 FAM58BPP0C7Q3 252 aa20.6■□□□□ 0.89
COL15A1-201ENST00000375001 CALB2P22676 271 aa20.6■□□□□ 0.89
COL15A1-201ENST00000375001 CCNA1P78396 465 aa20.6■□□□□ 0.89
COL15A1-201ENST00000375001 BNC2Q6ZN30 1099 aaPredicted RBP20.6■□□□□ 0.89
COL15A1-201ENST00000375001 THUMPD3Q9BV44 507 aaKnown RBP20.6■□□□□ 0.89
COL15A1-201ENST00000375001 EPB41L4AQ9HCS5 686 aaPredicted RBP20.6■□□□□ 0.89
COL15A1-201ENST00000375001 A2ML1A8K2U0 1454 aa20.6■□□□□ 0.89
COL15A1-201ENST00000375001 IQSEC2Q5JU85 1478 aa20.6■□□□□ 0.89
COL15A1-201ENST00000375001 O00370 1275 aa20.6■□□□□ 0.89
COL15A1-201ENST00000375001 SNPHO15079 494 aa20.6■□□□□ 0.89
COL15A1-201ENST00000375001 THRAP10827 490 aa20.6■□□□□ 0.89
COL15A1-201ENST00000375001 SGF29Q96ES7 293 aa20.6■□□□□ 0.89
COL15A1-201ENST00000375001 ARHGEF3Q9NR81 526 aa20.6■□□□□ 0.89
COL15A1-201ENST00000375001 EVPLLA8MZ36 301 aa20.6■□□□□ 0.89
COL15A1-201ENST00000375001 C12orf60Q5U649 245 aa20.6■□□□□ 0.89
COL15A1-201ENST00000375001 ZNF668Q96K58 619 aaPredicted RBP20.6■□□□□ 0.89
COL15A1-201ENST00000375001 TRAPPC9Q96Q05 1148 aa20.6■□□□□ 0.89
COL15A1-201ENST00000375001 TMEM79Q9BSE2 394 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms