RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 EMC10Q5UCC4 262 aa12.82□□□□□ -0.36
HMGCL-202ENST00000374487 DENND2CQ68D51 928 aa12.82□□□□□ -0.36
HMGCL-202ENST00000374487 SCARA3Q6AZY7 606 aa12.82□□□□□ -0.36
HMGCL-202ENST00000374487 CCSAPQ6IQ19 270 aaPredicted RBP12.82□□□□□ -0.36
HMGCL-202ENST00000374487 PLEKHA7Q6IQ23 1121 aa12.82□□□□□ -0.36
HMGCL-202ENST00000374487 ZDHHC24Q6UX98 284 aa12.82□□□□□ -0.36
HMGCL-202ENST00000374487 KLHDC9Q8NEP7 349 aa12.82□□□□□ -0.36
HMGCL-202ENST00000374487 PKNOX2Q96KN3 472 aa12.82□□□□□ -0.36
HMGCL-202ENST00000374487 PABPC3Q9H361 631 aaKnown RBP12.82□□□□□ -0.36
HMGCL-202ENST00000374487 RABEP2Q9H5N1 569 aa12.82□□□□□ -0.36
HMGCL-202ENST00000374487 CISHQ9NSE2 258 aa12.82□□□□□ -0.36
HMGCL-202ENST00000374487 ERAP1Q9NZ08 941 aa12.82□□□□□ -0.36
HMGCL-202ENST00000374487 FEZ2Q9UHY8 353 aaPredicted RBP12.82□□□□□ -0.36
HMGCL-202ENST00000374487 DNM1LO00429 736 aa12.81□□□□□ -0.36
HMGCL-202ENST00000374487 ASAP2O43150 1006 aa12.81□□□□□ -0.36
HMGCL-202ENST00000374487 GUCY1A3Q02108 690 aa12.81□□□□□ -0.36
HMGCL-202ENST00000374487 ZFYVE27Q5T4F4 411 aa12.81□□□□□ -0.36
HMGCL-202ENST00000374487 DAB2IPQ5VWQ8 1189 aa12.81□□□□□ -0.36
HMGCL-202ENST00000374487 IQSEC1Q6DN90 963 aa12.81□□□□□ -0.36
HMGCL-202ENST00000374487 CDR2LQ86X02 465 aaPredicted RBP12.81□□□□□ -0.36
HMGCL-202ENST00000374487 FEZF2Q8TBJ5 459 aa12.81□□□□□ -0.36
HMGCL-202ENST00000374487 ZBTB10Q96DT7 871 aa12.81□□□□□ -0.36
HMGCL-202ENST00000374487 ANKRD36BP1Q96IX9 119 aa12.81□□□□□ -0.36
HMGCL-202ENST00000374487 TXLNGYQ9BZA5 131 aa12.81□□□□□ -0.36
HMGCL-202ENST00000374487 FZD8Q9H461 694 aa12.81□□□□□ -0.36
HMGCL-202ENST00000374487 GRIN2DO15399 1336 aa12.81□□□□□ -0.36
HMGCL-202ENST00000374487 RBM47A0AV96 593 aaKnown RBP12.81□□□□□ -0.36
HMGCL-202ENST00000374487 B4GALT5O43286 388 aa12.81□□□□□ -0.36
HMGCL-202ENST00000374487 PSTPIP1O43586 416 aa12.81□□□□□ -0.36
HMGCL-202ENST00000374487 ASGR1P07306 291 aa12.81□□□□□ -0.36
HMGCL-202ENST00000374487 WEE2P0C1S8 567 aa12.81□□□□□ -0.36
HMGCL-202ENST00000374487 MMP8P22894 467 aa12.81□□□□□ -0.36
HMGCL-202ENST00000374487 MAN1A1P33908 653 aa12.81□□□□□ -0.36
HMGCL-202ENST00000374487 GJC1P36383 396 aa12.81□□□□□ -0.36
HMGCL-202ENST00000374487 CETN2P41208 172 aa12.81□□□□□ -0.36
HMGCL-202ENST00000374487 ZNF132P52740 706 aa12.81□□□□□ -0.36
HMGCL-202ENST00000374487 GJA9P57773 515 aa12.81□□□□□ -0.36
HMGCL-202ENST00000374487 PTP4A2Q12974 167 aa12.81□□□□□ -0.36
HMGCL-202ENST00000374487 DUSP28Q4G0W2 176 aa12.81□□□□□ -0.36
HMGCL-202ENST00000374487 AGBL2Q5U5Z8 902 aa12.81□□□□□ -0.36
HMGCL-202ENST00000374487 CXCL17Q6UXB2 119 aa12.81□□□□□ -0.36
HMGCL-202ENST00000374487 HOOK3Q86VS8 718 aa12.81□□□□□ -0.36
HMGCL-202ENST00000374487 ANKLE1Q8NAG6 615 aa12.81□□□□□ -0.36
HMGCL-202ENST00000374487 TMEM35BQ8NCS4 154 aa12.81□□□□□ -0.36
HMGCL-202ENST00000374487 ARRDC4Q8NCT1 418 aa12.81□□□□□ -0.36
HMGCL-202ENST00000374487 DDX27Q96GQ7 796 aaKnown RBP12.81□□□□□ -0.36
HMGCL-202ENST00000374487 HEMGNQ9BXL5 484 aa12.81□□□□□ -0.36
HMGCL-202ENST00000374487 RNPEPQ9H4A4 650 aa12.81□□□□□ -0.36
HMGCL-202ENST00000374487 ASIC3Q9UHC3 531 aa12.81□□□□□ -0.36
HMGCL-202ENST00000374487 IP6K2Q9UHH9 426 aa12.81□□□□□ -0.36
HMGCL-202ENST00000374487 NOVA2Q9UNW9 492 aaKnown RBP12.81□□□□□ -0.36
HMGCL-202ENST00000374487 CEP83Q9Y592 693 aa12.81□□□□□ -0.36
HMGCL-202ENST00000374487 LOC102724159A0A0B4J2E5 919 aa12.8□□□□□ -0.36
HMGCL-202ENST00000374487 KBTBD13C9JR72 458 aa12.8□□□□□ -0.36
HMGCL-202ENST00000374487 ABLIM1O14639 778 aa12.8□□□□□ -0.36
HMGCL-202ENST00000374487 LSM8O95777 96 aaKnown RBP12.8□□□□□ -0.36
HMGCL-202ENST00000374487 GAS8O95995 478 aa12.8□□□□□ -0.36
HMGCL-202ENST00000374487 CALB1P05937 261 aa12.8□□□□□ -0.36
HMGCL-202ENST00000374487 KRT19P08727 400 aa12.8□□□□□ -0.36
HMGCL-202ENST00000374487 SYN1P17600 705 aa12.8□□□□□ -0.36
HMGCL-202ENST00000374487 PROZP22891 400 aa12.8□□□□□ -0.36
HMGCL-202ENST00000374487 BRD2P25440 801 aaKnown RBP12.8□□□□□ -0.36
HMGCL-202ENST00000374487 MDH1P40925 334 aaKnown RBP12.8□□□□□ -0.36
HMGCL-202ENST00000374487 ACLYP53396 1101 aa12.8□□□□□ -0.36
HMGCL-202ENST00000374487 KRT17Q04695 432 aa12.8□□□□□ -0.36
HMGCL-202ENST00000374487 LAMC2Q13753 1193 aa12.8□□□□□ -0.36
HMGCL-202ENST00000374487 SLMAPQ14BN4 828 aa12.8□□□□□ -0.36
HMGCL-202ENST00000374487 PWP2Q15269 919 aaKnown RBP12.8□□□□□ -0.36
HMGCL-202ENST00000374487 SCARA5Q6ZMJ2 495 aa12.8□□□□□ -0.36
HMGCL-202ENST00000374487 GRK7Q8WTQ7 553 aa12.8□□□□□ -0.36
HMGCL-202ENST00000374487 ATG4AQ8WYN0 398 aa12.8□□□□□ -0.36
HMGCL-202ENST00000374487 ART4Q93070 314 aa12.8□□□□□ -0.36
HMGCL-202ENST00000374487 CCDC114Q96M63 670 aa12.8□□□□□ -0.36
HMGCL-202ENST00000374487 RPF1Q9H9Y2 349 aaKnown RBP12.8□□□□□ -0.36
HMGCL-202ENST00000374487 PTPRHQ9HD43 1115 aa12.8□□□□□ -0.36
HMGCL-202ENST00000374487 HOMER3Q9NSC5 361 aa12.8□□□□□ -0.36
HMGCL-202ENST00000374487 NXF1Q9UBU9 619 aaKnown RBP12.8□□□□□ -0.36
HMGCL-202ENST00000374487 SIP14410 1827 aa12.8□□□□□ -0.36
HMGCL-202ENST00000374487 A0A1W2PQ45 241 aaPredicted RBP12.8□□□□□ -0.36
HMGCL-202ENST00000374487 A0A1W2PQY0 241 aa12.8□□□□□ -0.36
HMGCL-202ENST00000374487 B4GALT4O60513 344 aa12.8□□□□□ -0.36
HMGCL-202ENST00000374487 RALAP11233 206 aa12.8□□□□□ -0.36
HMGCL-202ENST00000374487 LSP1P33241 339 aa12.8□□□□□ -0.36
HMGCL-202ENST00000374487 PHKA2P46019 1235 aa12.8□□□□□ -0.36
HMGCL-202ENST00000374487 CCT5P48643 541 aa12.8□□□□□ -0.36
HMGCL-202ENST00000374487 YWHAEP62258 255 aaKnown RBP12.8□□□□□ -0.36
HMGCL-202ENST00000374487 DCUN1D2Q6PH85 259 aa12.8□□□□□ -0.36
HMGCL-202ENST00000374487 RNF180Q86T96 592 aa12.8□□□□□ -0.36
HMGCL-202ENST00000374487 CCDC25Q86WR0 208 aa12.8□□□□□ -0.36
HMGCL-202ENST00000374487 C7orf61Q8IZ16 206 aa12.8□□□□□ -0.36
HMGCL-202ENST00000374487 UBR7Q8N806 425 aa12.8□□□□□ -0.36
HMGCL-202ENST00000374487 OR6J1Q8NGC5 347 aa12.8□□□□□ -0.36
HMGCL-202ENST00000374487 SLCO2A1Q92959 643 aa12.8□□□□□ -0.36
HMGCL-202ENST00000374487 FAM129AQ9BZQ8 928 aa12.8□□□□□ -0.36
HMGCL-202ENST00000374487 UPF3AQ9H1J1 476 aaKnown RBP12.8□□□□□ -0.36
HMGCL-202ENST00000374487 CHST7Q9NS84 486 aa12.8□□□□□ -0.36
HMGCL-202ENST00000374487 EBAG9O00559 213 aa12.79□□□□□ -0.36
HMGCL-202ENST00000374487 NDUFAB1O14561 156 aa12.79□□□□□ -0.36
HMGCL-202ENST00000374487 IL18RAPO95256 599 aa12.79□□□□□ -0.36
HMGCL-202ENST00000374487 GJB6O95452 261 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms