RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 DAPK3O43293 454 aa9.22□□□□□ -0.93
SNRNP40-202ENST00000373720 CILPO75339 1184 aa9.22□□□□□ -0.93
SNRNP40-202ENST00000373720 ZMYND10O75800 440 aa9.22□□□□□ -0.93
SNRNP40-202ENST00000373720 RNF8O76064 485 aa9.22□□□□□ -0.93
SNRNP40-202ENST00000373720 F2P00734 622 aa9.22□□□□□ -0.93
SNRNP40-202ENST00000373720 AGTP01019 485 aa9.22□□□□□ -0.93
SNRNP40-202ENST00000373720 CST3P01034 146 aaPredicted RBP9.22□□□□□ -0.93
SNRNP40-202ENST00000373720 MMP3P08254 477 aa9.22□□□□□ -0.93
SNRNP40-202ENST00000373720 ECHS1P30084 290 aa9.22□□□□□ -0.93
SNRNP40-202ENST00000373720 STIP1P31948 543 aaKnown RBP9.22□□□□□ -0.93
SNRNP40-202ENST00000373720 HSD17B3P37058 310 aa9.22□□□□□ -0.93
SNRNP40-202ENST00000373720 ASPAP45381 313 aa9.22□□□□□ -0.93
SNRNP40-202ENST00000373720 LMAN1P49257 510 aa9.22□□□□□ -0.93
SNRNP40-202ENST00000373720 PMS2P54278 862 aa9.22□□□□□ -0.93
SNRNP40-202ENST00000373720 MYL6P60660 151 aa9.22□□□□□ -0.93
SNRNP40-202ENST00000373720 IFFO1Q0D2I5 559 aa9.22□□□□□ -0.93
SNRNP40-202ENST00000373720 MAP2K5Q13163 448 aa9.22□□□□□ -0.93
SNRNP40-202ENST00000373720 KLF1Q13351 362 aaPredicted RBP9.22□□□□□ -0.93
SNRNP40-202ENST00000373720 RASA2Q15283 850 aa9.22□□□□□ -0.93
SNRNP40-202ENST00000373720 PPP1R7Q15435 360 aa9.22□□□□□ -0.93
SNRNP40-202ENST00000373720 GRIK4Q16099 956 aa9.22□□□□□ -0.93
SNRNP40-202ENST00000373720 GPR162Q16538 588 aa9.22□□□□□ -0.93
SNRNP40-202ENST00000373720 AMHR2Q16671 573 aa9.22□□□□□ -0.93
SNRNP40-202ENST00000373720 TFDP3Q5H9I0 405 aa9.22□□□□□ -0.93
SNRNP40-202ENST00000373720 PPP1R15BQ5SWA1 713 aa9.22□□□□□ -0.93
SNRNP40-202ENST00000373720 DENND2CQ68D51 928 aa9.22□□□□□ -0.93
SNRNP40-202ENST00000373720 TAF2Q6P1X5 1199 aa9.22□□□□□ -0.93
SNRNP40-202ENST00000373720 ZNF365Q70YC5 407 aa9.22□□□□□ -0.93
SNRNP40-202ENST00000373720 MAP7D3Q8IWC1 876 aa9.22□□□□□ -0.93
SNRNP40-202ENST00000373720 BEST2Q8NFU1 509 aa9.22□□□□□ -0.93
SNRNP40-202ENST00000373720 P3H4Q92791 437 aa9.22□□□□□ -0.93
SNRNP40-202ENST00000373720 C18orf8Q96DM3 657 aa9.22□□□□□ -0.93
SNRNP40-202ENST00000373720 SCLT1Q96NL6 688 aa9.22□□□□□ -0.93
SNRNP40-202ENST00000373720 TBCBQ99426 244 aa9.22□□□□□ -0.93
SNRNP40-202ENST00000373720 PI4K2AQ9BTU6 479 aa9.22□□□□□ -0.93
SNRNP40-202ENST00000373720 NT5C1AQ9BXI3 368 aa9.22□□□□□ -0.93
SNRNP40-202ENST00000373720 OSBPL8Q9BZF1 889 aa9.22□□□□□ -0.93
SNRNP40-202ENST00000373720 MTMR12Q9C0I1 747 aa9.22□□□□□ -0.93
SNRNP40-202ENST00000373720 RNPEPQ9H4A4 650 aa9.22□□□□□ -0.93
SNRNP40-202ENST00000373720 EFCC1Q9HA90 598 aa9.22□□□□□ -0.93
SNRNP40-202ENST00000373720 TMBIM4Q9HC24 238 aa9.22□□□□□ -0.93
SNRNP40-202ENST00000373720 ASNSD1Q9NWL6 643 aa9.22□□□□□ -0.93
SNRNP40-202ENST00000373720 FETUBQ9UGM5 382 aa9.22□□□□□ -0.93
SNRNP40-202ENST00000373720 AKT3Q9Y243 479 aa9.22□□□□□ -0.93
SNRNP40-202ENST00000373720 ATXN2Q99700 1313 aaKnown RBP9.22□□□□□ -0.93
SNRNP40-202ENST00000373720 ZSWIM8A7E2V4 1837 aa9.21□□□□□ -0.93
SNRNP40-202ENST00000373720 TCRBV5S1A1TA0A578 114 aa9.21□□□□□ -0.94
SNRNP40-202ENST00000373720 H0YGN5 161 aa9.21□□□□□ -0.94
SNRNP40-202ENST00000373720 EIF3HO15372 352 aaKnown RBP eCLIP9.21□□□□□ -0.94
SNRNP40-202ENST00000373720 SORBS3O60504 671 aa9.21□□□□□ -0.94
SNRNP40-202ENST00000373720 SNAI1O95863 264 aaPredicted RBP9.21□□□□□ -0.94
SNRNP40-202ENST00000373720 ITGAVP06756 1048 aa9.21□□□□□ -0.94
SNRNP40-202ENST00000373720 RARAP10276 462 aa9.21□□□□□ -0.94
SNRNP40-202ENST00000373720 KRT3P12035 628 aa9.21□□□□□ -0.94
SNRNP40-202ENST00000373720 ITGA4P13612 1032 aa9.21□□□□□ -0.94
SNRNP40-202ENST00000373720 ACADSBP45954 432 aa9.21□□□□□ -0.94
SNRNP40-202ENST00000373720 DNA2P51530 1060 aa9.21□□□□□ -0.94
SNRNP40-202ENST00000373720 SLC8A3P57103 927 aa9.21□□□□□ -0.94
SNRNP40-202ENST00000373720 NKX3-2P78367 333 aa9.21□□□□□ -0.94
SNRNP40-202ENST00000373720 FOXK1P85037 733 aa9.21□□□□□ -0.94
SNRNP40-202ENST00000373720 PTPN11Q06124 597 aaPredicted RBP9.21□□□□□ -0.94
SNRNP40-202ENST00000373720 DHX9Q08211 1270 aaKnown RBP9.21□□□□□ -0.94
SNRNP40-202ENST00000373720 NFX1Q12986 1120 aaKnown RBP9.21□□□□□ -0.94
SNRNP40-202ENST00000373720 TFDP2Q14188 446 aa9.21□□□□□ -0.94
SNRNP40-202ENST00000373720 ZSCAN26Q16670 478 aa9.21□□□□□ -0.94
SNRNP40-202ENST00000373720 WDR72Q3MJ13 1102 aa9.21□□□□□ -0.94
SNRNP40-202ENST00000373720 BOLA3Q53S33 107 aa9.21□□□□□ -0.94
SNRNP40-202ENST00000373720 FAM47CQ5HY64 1035 aa9.21□□□□□ -0.94
SNRNP40-202ENST00000373720 MORN1Q5T089 497 aa9.21□□□□□ -0.94
SNRNP40-202ENST00000373720 MFSD5Q6N075 450 aa9.21□□□□□ -0.94
SNRNP40-202ENST00000373720 LCLAT1Q6UWP7 414 aa9.21□□□□□ -0.94
SNRNP40-202ENST00000373720 EEPD1Q7L9B9 569 aa9.21□□□□□ -0.94
SNRNP40-202ENST00000373720 RPAINQ86UA6 219 aa9.21□□□□□ -0.94
SNRNP40-202ENST00000373720 PSTKQ8IV42 348 aaKnown RBP9.21□□□□□ -0.94
SNRNP40-202ENST00000373720 OR6J1Q8NGC5 347 aa9.21□□□□□ -0.94
SNRNP40-202ENST00000373720 NLRP7Q8WX94 980 aa9.21□□□□□ -0.94
SNRNP40-202ENST00000373720 CPA5Q8WXQ8 436 aa9.21□□□□□ -0.94
SNRNP40-202ENST00000373720 BRI3BPQ8WY22 251 aa9.21□□□□□ -0.94
SNRNP40-202ENST00000373720 KRT35Q92764 455 aa9.21□□□□□ -0.94
SNRNP40-202ENST00000373720 NKD2Q969F2 451 aaPredicted RBP9.21□□□□□ -0.94
SNRNP40-202ENST00000373720 HPDLQ96IR7 371 aa9.21□□□□□ -0.94
SNRNP40-202ENST00000373720 ZNF560Q96MR9 790 aa9.21□□□□□ -0.94
SNRNP40-202ENST00000373720 SERPINB12Q96P63 405 aa9.21□□□□□ -0.94
SNRNP40-202ENST00000373720 ARID3AQ99856 593 aa9.21□□□□□ -0.94
SNRNP40-202ENST00000373720 AP5M1Q9H0R1 490 aa9.21□□□□□ -0.94
SNRNP40-202ENST00000373720 PDZD7Q9H5P4 517 aa9.21□□□□□ -0.94
SNRNP40-202ENST00000373720 CHST12Q9NRB3 414 aa9.21□□□□□ -0.94
SNRNP40-202ENST00000373720 EHD2Q9NZN4 543 aa9.21□□□□□ -0.94
SNRNP40-202ENST00000373720 UBQLN1Q9UMX0 589 aaKnown RBP9.21□□□□□ -0.94
SNRNP40-202ENST00000373720 PLAAQ9Y263 795 aa9.21□□□□□ -0.94
SNRNP40-202ENST00000373720 ACTL7BQ9Y614 415 aa9.21□□□□□ -0.94
SNRNP40-202ENST00000373720 NFS1Q9Y697 457 aa9.21□□□□□ -0.94
SNRNP40-202ENST00000373720 PTPRJQ12913 1337 aa9.21□□□□□ -0.94
SNRNP40-202ENST00000373720 UMODL1Q5DID0 1318 aa9.21□□□□□ -0.94
SNRNP40-202ENST00000373720 A0A087WZ62 844 aa9.2□□□□□ -0.94
SNRNP40-202ENST00000373720 ARHGEF37A1IGU5 675 aa9.2□□□□□ -0.94
SNRNP40-202ENST00000373720 CFAP69A5D8W1 941 aa9.2□□□□□ -0.94
SNRNP40-202ENST00000373720 LACTBL1A8MY62 500 aa9.2□□□□□ -0.94
SNRNP40-202ENST00000373720 HAS3O00219 553 aa9.2□□□□□ -0.94
SNRNP40-202ENST00000373720 TSPAN1O60635 241 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms