RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 INTS6LQ5JSJ4 861 aaKnown RBP12.88□□□□□ -0.35
HDAC8-201ENST00000373554 IQCEQ6IPM2 695 aa12.88□□□□□ -0.35
HDAC8-201ENST00000373554 SV2AQ7L0J3 742 aa12.88□□□□□ -0.35
HDAC8-201ENST00000373554 ZC3H3Q8IXZ2 948 aaKnown RBP12.88□□□□□ -0.35
HDAC8-201ENST00000373554 ZDHHC14Q8IZN3 488 aa12.88□□□□□ -0.35
HDAC8-201ENST00000373554 ATAD1Q8NBU5 361 aa12.88□□□□□ -0.35
HDAC8-201ENST00000373554 SPPL2BQ8TCT7 592 aa12.88□□□□□ -0.35
HDAC8-201ENST00000373554 NELFBQ8WX92 580 aa12.88□□□□□ -0.35
HDAC8-201ENST00000373554 XYLT2Q9H1B5 865 aa12.88□□□□□ -0.35
HDAC8-201ENST00000373554 MMRN2Q9H8L6 949 aa12.88□□□□□ -0.35
HDAC8-201ENST00000373554 VRTNQ9H8Y1 702 aa12.88□□□□□ -0.35
HDAC8-201ENST00000373554 ABI2Q9NYB9 513 aaPredicted RBP12.88□□□□□ -0.35
HDAC8-201ENST00000373554 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.88□□□□□ -0.35
HDAC8-201ENST00000373554 NXF1Q9UBU9 619 aaKnown RBP12.88□□□□□ -0.35
HDAC8-201ENST00000373554 C5orf42Q9H799 3197 aa12.87□□□□□ -0.35
HDAC8-201ENST00000373554 PPP1R3GB7ZBB8 358 aa12.87□□□□□ -0.35
HDAC8-201ENST00000373554 DCXO43602 365 aa12.87□□□□□ -0.35
HDAC8-201ENST00000373554 TACC1O75410 805 aa12.87□□□□□ -0.35
HDAC8-201ENST00000373554 VNN2O95498 520 aa12.87□□□□□ -0.35
HDAC8-201ENST00000373554 P4HA1P13674 534 aa12.87□□□□□ -0.35
HDAC8-201ENST00000373554 PTPN2P17706 415 aa12.87□□□□□ -0.35
HDAC8-201ENST00000373554 WARSP23381 471 aaKnown RBP12.87□□□□□ -0.35
HDAC8-201ENST00000373554 GTF2H1P32780 548 aa12.87□□□□□ -0.35
HDAC8-201ENST00000373554 ALDH1A3P47895 512 aa12.87□□□□□ -0.35
HDAC8-201ENST00000373554 GCLMP48507 274 aa12.87□□□□□ -0.35
HDAC8-201ENST00000373554 TUFMP49411 452 aaKnown RBP12.87□□□□□ -0.35
HDAC8-201ENST00000373554 EPHB3P54753 998 aa12.87□□□□□ -0.35
HDAC8-201ENST00000373554 NTHL1P78549 312 aa12.87□□□□□ -0.35
HDAC8-201ENST00000373554 SGSM1Q2NKQ1 1148 aa12.87□□□□□ -0.35
HDAC8-201ENST00000373554 MGAT5BQ3V5L5 792 aa12.87□□□□□ -0.35
HDAC8-201ENST00000373554 DCAF17Q5H9S7 520 aaPredicted RBP12.87□□□□□ -0.35
HDAC8-201ENST00000373554 C1orf220Q5T0J3 134 aa12.87□□□□□ -0.35
HDAC8-201ENST00000373554 TCERG1LQ5VWI1 586 aa12.87□□□□□ -0.35
HDAC8-201ENST00000373554 FOXR2Q6PJQ5 311 aa12.87□□□□□ -0.35
HDAC8-201ENST00000373554 LIMS2Q7Z4I7 341 aa12.87□□□□□ -0.35
HDAC8-201ENST00000373554 CCDC150Q8NCX0 1101 aa12.87□□□□□ -0.35
HDAC8-201ENST00000373554 KBTBD7Q8WVZ9 684 aa12.87□□□□□ -0.35
HDAC8-201ENST00000373554 TAF4BQ92750 862 aa12.87□□□□□ -0.35
HDAC8-201ENST00000373554 ZNF512Q96ME7 567 aaPredicted RBP12.87□□□□□ -0.35
HDAC8-201ENST00000373554 CEP63Q96MT8 703 aa12.87□□□□□ -0.35
HDAC8-201ENST00000373554 SEPT5Q99719 369 aaPredicted RBP12.87□□□□□ -0.35
HDAC8-201ENST00000373554 SNX25Q9H3E2 840 aa12.87□□□□□ -0.35
HDAC8-201ENST00000373554 TMEM8AQ9HCN3 771 aa12.87□□□□□ -0.35
HDAC8-201ENST00000373554 HCFC1R1Q9NWW0 138 aa12.87□□□□□ -0.35
HDAC8-201ENST00000373554 DNMT3BQ9UBC3 853 aaKnown RBP12.87□□□□□ -0.35
HDAC8-201ENST00000373554 ARMCX3Q9UH62 379 aaPredicted RBP12.87□□□□□ -0.35
HDAC8-201ENST00000373554 MUTYHQ9UIF7 546 aa12.87□□□□□ -0.35
HDAC8-201ENST00000373554 SLC27A5Q9Y2P5 690 aa12.87□□□□□ -0.35
HDAC8-201ENST00000373554 PCDHB5Q9Y5E4 795 aa12.87□□□□□ -0.35
HDAC8-201ENST00000373554 VNN1O95497 513 aa12.86□□□□□ -0.35
HDAC8-201ENST00000373554 HLA-DRAP01903 254 aa12.86□□□□□ -0.35
HDAC8-201ENST00000373554 RHOP08100 348 aa12.86□□□□□ -0.35
HDAC8-201ENST00000373554 FAM163BP0C2L3 166 aa12.86□□□□□ -0.35
HDAC8-201ENST00000373554 MXI1P50539 228 aa12.86□□□□□ -0.35
HDAC8-201ENST00000373554 PPP3CAQ08209 521 aa12.86□□□□□ -0.35
HDAC8-201ENST00000373554 VEPH1Q14D04 833 aa12.86□□□□□ -0.35
HDAC8-201ENST00000373554 MAPRE1Q15691 268 aaKnown RBP12.86□□□□□ -0.35
HDAC8-201ENST00000373554 CCDC40Q4G0X9 1142 aa12.86□□□□□ -0.35
HDAC8-201ENST00000373554 KRT39Q6A163 491 aa12.86□□□□□ -0.35
HDAC8-201ENST00000373554 TTI2Q6NXR4 508 aa12.86□□□□□ -0.35
HDAC8-201ENST00000373554 SCARA5Q6ZMJ2 495 aa12.86□□□□□ -0.35
HDAC8-201ENST00000373554 PDZD4Q76G19 769 aaPredicted RBP12.86□□□□□ -0.35
HDAC8-201ENST00000373554 LRRTM3Q86VH5 581 aa12.86□□□□□ -0.35
HDAC8-201ENST00000373554 OSTM1Q86WC4 334 aa12.86□□□□□ -0.35
HDAC8-201ENST00000373554 TTC9BQ8N6N2 239 aa12.86□□□□□ -0.35
HDAC8-201ENST00000373554 LEMD2Q8NC56 503 aa12.86□□□□□ -0.35
HDAC8-201ENST00000373554 OR6B3Q8NGW1 331 aa12.86□□□□□ -0.35
HDAC8-201ENST00000373554 KHSRPQ92945 711 aaKnown RBP eCLIP12.86□□□□□ -0.35
HDAC8-201ENST00000373554 SYT15Q9BQS2 421 aa12.86□□□□□ -0.35
HDAC8-201ENST00000373554 CORO1BQ9BR76 489 aa12.86□□□□□ -0.35
HDAC8-201ENST00000373554 CRISPLD1Q9H336 500 aa12.86□□□□□ -0.35
HDAC8-201ENST00000373554 METTL14Q9HCE5 456 aaKnown RBP12.86□□□□□ -0.35
HDAC8-201ENST00000373554 ASAH2Q9NR71 780 aa12.86□□□□□ -0.35
HDAC8-201ENST00000373554 CDH9Q9ULB4 789 aa12.86□□□□□ -0.35
HDAC8-201ENST00000373554 MRPS23Q9Y3D9 190 aaKnown RBP12.86□□□□□ -0.35
HDAC8-201ENST00000373554 ASB3Q9Y575 518 aa12.86□□□□□ -0.35
HDAC8-201ENST00000373554 ZFP37Q9Y6Q3 630 aaPredicted RBP12.86□□□□□ -0.35
HDAC8-201ENST00000373554 PI4K2BG5E9Z4 385 aa12.85□□□□□ -0.35
HDAC8-201ENST00000373554 ZNF197O14709 1029 aa12.85□□□□□ -0.35
HDAC8-201ENST00000373554 HCRTO43612 131 aa12.85□□□□□ -0.35
HDAC8-201ENST00000373554 N4BP1O75113 896 aaKnown RBP12.85□□□□□ -0.35
HDAC8-201ENST00000373554 ASS1P00966 412 aaKnown RBP12.85□□□□□ -0.35
HDAC8-201ENST00000373554 GNL1P36915 607 aaPredicted RBP12.85□□□□□ -0.35
HDAC8-201ENST00000373554 STX17P56962 302 aa12.85□□□□□ -0.35
HDAC8-201ENST00000373554 PSMC1P62191 440 aaKnown RBP12.85□□□□□ -0.35
HDAC8-201ENST00000373554 NOP14P78316 857 aaKnown RBP12.85□□□□□ -0.35
HDAC8-201ENST00000373554 MTMR3Q13615 1198 aa12.85□□□□□ -0.35
HDAC8-201ENST00000373554 PTPN21Q16825 1174 aa12.85□□□□□ -0.35
HDAC8-201ENST00000373554 CYP4A22Q5TCH4 519 aa12.85□□□□□ -0.35
HDAC8-201ENST00000373554 C4orf50Q6ZRC1 276 aa12.85□□□□□ -0.35
HDAC8-201ENST00000373554 ITIH5Q86UX2 942 aa12.85□□□□□ -0.35
HDAC8-201ENST00000373554 SPATA2LQ8IUW3 424 aaPredicted RBP12.85□□□□□ -0.35
HDAC8-201ENST00000373554 MLKLQ8NB16 471 aa12.85□□□□□ -0.35
HDAC8-201ENST00000373554 FAM200AQ8TCP9 573 aa12.85□□□□□ -0.35
HDAC8-201ENST00000373554 TAS1R2Q8TE23 839 aa12.85□□□□□ -0.35
HDAC8-201ENST00000373554 FGF13Q92913 245 aa12.85□□□□□ -0.35
HDAC8-201ENST00000373554 FUBP3Q96I24 572 aaKnown RBP eCLIP12.85□□□□□ -0.35
HDAC8-201ENST00000373554 MYADMQ96S97 322 aa12.85□□□□□ -0.35
HDAC8-201ENST00000373554 PKMYT1Q99640 499 aa12.85□□□□□ -0.35
HDAC8-201ENST00000373554 DUSP9Q99956 384 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms