RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 TJP2Q9UDY2 1190 aa20.75■□□□□ 0.91
HDAC1-201ENST00000373548 PURAQ00577 322 aaKnown RBP20.74■□□□□ 0.91
HDAC1-201ENST00000373548 ZBTB6Q15916 424 aa20.74■□□□□ 0.91
HDAC1-201ENST00000373548 DCUN1D2Q6PH85 259 aa20.74■□□□□ 0.91
HDAC1-201ENST00000373548 KATNAL1Q9BW62 490 aa20.74■□□□□ 0.91
HDAC1-201ENST00000373548 STRIP2Q9ULQ0 834 aa20.74■□□□□ 0.91
HDAC1-201ENST00000373548 BARX2Q9UMQ3 279 aaPredicted RBP20.74■□□□□ 0.91
HDAC1-201ENST00000373548 C17orf102A2RUQ5 167 aa20.74■□□□□ 0.91
HDAC1-201ENST00000373548 AKR1A1P14550 325 aa20.74■□□□□ 0.91
HDAC1-201ENST00000373548 HOXC8P31273 242 aa20.74■□□□□ 0.91
HDAC1-201ENST00000373548 FNTAP49354 379 aa20.74■□□□□ 0.91
HDAC1-201ENST00000373548 DRG2P55039 364 aaKnown RBP20.74■□□□□ 0.91
HDAC1-201ENST00000373548 TAP1Q03518 808 aa20.74■□□□□ 0.91
HDAC1-201ENST00000373548 DMTNQ08495 405 aa20.74■□□□□ 0.91
HDAC1-201ENST00000373548 SREBF2Q12772 1141 aa20.74■□□□□ 0.91
HDAC1-201ENST00000373548 RUNDC3BQ96NL0 473 aa20.74■□□□□ 0.91
HDAC1-201ENST00000373548 ZIC5Q96T25 663 aa20.74■□□□□ 0.91
HDAC1-201ENST00000373548 ZDHHC18Q9NUE0 388 aa20.74■□□□□ 0.91
HDAC1-201ENST00000373548 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.74■□□□□ 0.91
HDAC1-201ENST00000373548 TLL2Q9Y6L7 1015 aa20.74■□□□□ 0.91
HDAC1-201ENST00000373548 MYADML2A6NDP7 307 aa20.73■□□□□ 0.91
HDAC1-201ENST00000373548 PODXLO00592 558 aa20.73■□□□□ 0.91
HDAC1-201ENST00000373548 PPEF2O14830 753 aa20.73■□□□□ 0.91
HDAC1-201ENST00000373548 MICAL2O94851 1124 aa20.73■□□□□ 0.91
HDAC1-201ENST00000373548 TCF4P15884 667 aa20.73■□□□□ 0.91
HDAC1-201ENST00000373548 AXLP30530 894 aa20.73■□□□□ 0.91
HDAC1-201ENST00000373548 GJC1P36383 396 aa20.73■□□□□ 0.91
HDAC1-201ENST00000373548 SSR1P43307 286 aaKnown RBP20.73■□□□□ 0.91
HDAC1-201ENST00000373548 KCNJ1P48048 391 aa20.73■□□□□ 0.91
HDAC1-201ENST00000373548 NDST1P52848 882 aa20.73■□□□□ 0.91
HDAC1-201ENST00000373548 YARSP54577 528 aaKnown RBP20.73■□□□□ 0.91
HDAC1-201ENST00000373548 SGO2Q562F6 1265 aa20.73■□□□□ 0.91
HDAC1-201ENST00000373548 CCDC105Q8IYK2 499 aa20.73■□□□□ 0.91
HDAC1-201ENST00000373548 C1orf54Q8WWF1 131 aa20.73■□□□□ 0.91
HDAC1-201ENST00000373548 CPXM1Q96SM3 734 aa20.73■□□□□ 0.91
HDAC1-201ENST00000373548 RUFY1Q96T51 708 aa20.73■□□□□ 0.91
HDAC1-201ENST00000373548 FAM204AQ9H8W3 233 aa20.73■□□□□ 0.91
HDAC1-201ENST00000373548 TUBGCP4Q9UGJ1 667 aa20.73■□□□□ 0.91
HDAC1-201ENST00000373548 SNX24Q9Y343 169 aa20.73■□□□□ 0.91
HDAC1-201ENST00000373548 F8VP50 259 aa20.72■□□□□ 0.91
HDAC1-201ENST00000373548 OPA1O60313 960 aa20.72■□□□□ 0.91
HDAC1-201ENST00000373548 RECQL4O94761 1208 aa20.72■□□□□ 0.91
HDAC1-201ENST00000373548 RALAP11233 206 aa20.72■□□□□ 0.91
HDAC1-201ENST00000373548 VDRP11473 427 aa20.72■□□□□ 0.91
HDAC1-201ENST00000373548 MYO1EQ12965 1108 aa20.72■□□□□ 0.91
HDAC1-201ENST00000373548 ALKAL1Q6UXT8 129 aa20.72■□□□□ 0.91
HDAC1-201ENST00000373548 CCDC50Q8IVM0 306 aa20.72■□□□□ 0.91
HDAC1-201ENST00000373548 EXD1Q8NHP7 514 aa20.72■□□□□ 0.91
HDAC1-201ENST00000373548 MAIP1Q8WWC4 291 aa20.72■□□□□ 0.91
HDAC1-201ENST00000373548 EXOC4Q96A65 974 aa20.72■□□□□ 0.91
HDAC1-201ENST00000373548 LRRC45Q96CN5 670 aa20.72■□□□□ 0.91
HDAC1-201ENST00000373548 FAM124BQ9H5Z6 455 aaPredicted RBP20.72■□□□□ 0.91
HDAC1-201ENST00000373548 LCMT1Q9UIC8 334 aa20.72■□□□□ 0.91
HDAC1-201ENST00000373548 PIN4Q9Y237 131 aaKnown RBP20.72■□□□□ 0.91
HDAC1-201ENST00000373548 GOLGA8SH3BPF8 625 aa20.72■□□□□ 0.91
HDAC1-201ENST00000373548 HSD17B3P37058 310 aa20.72■□□□□ 0.91
HDAC1-201ENST00000373548 UAP1Q16222 522 aaPredicted RBP20.72■□□□□ 0.91
HDAC1-201ENST00000373548 CNGA2Q16280 664 aa20.72■□□□□ 0.91
HDAC1-201ENST00000373548 GLRA4Q5JXX5 417 aa20.72■□□□□ 0.91
HDAC1-201ENST00000373548 ANKS1BQ7Z6G8 1248 aa20.72■□□□□ 0.91
HDAC1-201ENST00000373548 C18orf25Q96B23 403 aaPredicted RBP20.72■□□□□ 0.91
HDAC1-201ENST00000373548 HEXIM2Q96MH2 286 aaKnown RBP20.72■□□□□ 0.91
HDAC1-201ENST00000373548 TRIM6Q9C030 488 aaPredicted RBP20.72■□□□□ 0.91
HDAC1-201ENST00000373548 CHST7Q9NS84 486 aa20.72■□□□□ 0.91
HDAC1-201ENST00000373548 GRHL1Q9NZI5 618 aa20.72■□□□□ 0.91
HDAC1-201ENST00000373548 CNTN3Q9P232 1028 aa20.72■□□□□ 0.91
HDAC1-201ENST00000373548 DUSP11O75319 330 aaKnown RBP20.71■□□□□ 0.91
HDAC1-201ENST00000373548 RPL21P46778 160 aaKnown RBP20.71■□□□□ 0.91
HDAC1-201ENST00000373548 KLF1Q13351 362 aaPredicted RBP20.71■□□□□ 0.91
HDAC1-201ENST00000373548 PIGHQ14442 188 aaPredicted RBP20.71■□□□□ 0.91
HDAC1-201ENST00000373548 ATP13A4Q4VNC1 1196 aa20.71■□□□□ 0.91
HDAC1-201ENST00000373548 ZDHHC24Q6UX98 284 aa20.71■□□□□ 0.91
HDAC1-201ENST00000373548 TMC3Q7Z5M5 1100 aa20.71■□□□□ 0.91
HDAC1-201ENST00000373548 TTC39CQ8N584 583 aa20.71■□□□□ 0.91
HDAC1-201ENST00000373548 C7orf31Q8N865 590 aa20.71■□□□□ 0.91
HDAC1-201ENST00000373548 NIPA2Q8N8Q9 360 aa20.71■□□□□ 0.91
HDAC1-201ENST00000373548 ATG4AQ8WYN0 398 aa20.71■□□□□ 0.91
HDAC1-201ENST00000373548 FMO2Q99518 471 aa20.71■□□□□ 0.91
HDAC1-201ENST00000373548 APOL6Q9BWW8 343 aa20.71■□□□□ 0.91
HDAC1-201ENST00000373548 HEMGNQ9BXL5 484 aa20.71■□□□□ 0.91
HDAC1-201ENST00000373548 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.71■□□□□ 0.91
HDAC1-201ENST00000373548 PTPN22Q9Y2R2 807 aa20.71■□□□□ 0.91
HDAC1-201ENST00000373548 PCNTO95613 3336 aa20.71■□□□□ 0.91
HDAC1-201ENST00000373548 SIGLEC16A6NMB1 481 aa20.71■□□□□ 0.91
HDAC1-201ENST00000373548 M0QYV0 167 aa20.71■□□□□ 0.91
HDAC1-201ENST00000373548 HMGCRP04035 888 aa20.71■□□□□ 0.91
HDAC1-201ENST00000373548 ERBB2P04626 1255 aa20.71■□□□□ 0.91
HDAC1-201ENST00000373548 C6orf222P0C671 652 aaPredicted RBP20.71■□□□□ 0.91
HDAC1-201ENST00000373548 AKAP5P24588 427 aa20.71■□□□□ 0.91
HDAC1-201ENST00000373548 RFC1P35251 1148 aaPredicted RBP20.71■□□□□ 0.91
HDAC1-201ENST00000373548 CRYBB1P53674 252 aaPredicted RBP20.71■□□□□ 0.91
HDAC1-201ENST00000373548 PSMC1P62191 440 aaKnown RBP20.71■□□□□ 0.91
HDAC1-201ENST00000373548 UBXN11Q5T124 520 aa20.71■□□□□ 0.91
HDAC1-201ENST00000373548 XYLT1Q86Y38 959 aa20.71■□□□□ 0.91
HDAC1-201ENST00000373548 BEST2Q8NFU1 509 aa20.71■□□□□ 0.91
HDAC1-201ENST00000373548 SLCO2A1Q92959 643 aa20.71■□□□□ 0.91
HDAC1-201ENST00000373548 OSBPL8Q9BZF1 889 aa20.71■□□□□ 0.91
HDAC1-201ENST00000373548 ARHGAP39Q9C0H5 1083 aa20.71■□□□□ 0.91
HDAC1-201ENST00000373548 RNF19AQ9NV58 838 aa20.71■□□□□ 0.91
HDAC1-201ENST00000373548 DCAF8L1A6NGE4 600 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms