RNA–Protein interactions for RNA: ENST00000373492.6

PBX3-205, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-205ENST00000373492 FUCA2Q9BTY2 467 aa19.65■□□□□ 0.74
PBX3-205ENST00000373492 RAB20Q9NX57 234 aa19.65■□□□□ 0.74
PBX3-205ENST00000373492 C5orf42Q9H799 3197 aa19.65■□□□□ 0.74
PBX3-205ENST00000373492 KCNJ18B7U540 433 aa19.64■□□□□ 0.73
PBX3-205ENST00000373492 P4HA2O15460 535 aa19.64■□□□□ 0.73
PBX3-205ENST00000373492 ZMYND10O75800 440 aa19.64■□□□□ 0.73
PBX3-205ENST00000373492 FAM163BP0C2L3 166 aa19.64■□□□□ 0.73
PBX3-205ENST00000373492 CPB1P15086 417 aa19.64■□□□□ 0.73
PBX3-205ENST00000373492 LHX1P48742 406 aa19.64■□□□□ 0.73
PBX3-205ENST00000373492 ARPP19P56211 112 aa19.64■□□□□ 0.73
PBX3-205ENST00000373492 NOP14P78316 857 aaKnown RBP19.64■□□□□ 0.73
PBX3-205ENST00000373492 KCNJ12Q14500 433 aa19.64■□□□□ 0.73
PBX3-205ENST00000373492 SOWAHAQ2M3V2 549 aa19.64■□□□□ 0.73
PBX3-205ENST00000373492 UVSSAQ2YD98 709 aa19.64■□□□□ 0.73
PBX3-205ENST00000373492 HSP90AA4PQ58FG1 418 aa19.64■□□□□ 0.73
PBX3-205ENST00000373492 WDR44Q5JSH3 913 aa19.64■□□□□ 0.73
PBX3-205ENST00000373492 LIN9Q5TKA1 542 aa19.64■□□□□ 0.73
PBX3-205ENST00000373492 IRF2BP1Q8IU81 584 aa19.64■□□□□ 0.73
PBX3-205ENST00000373492 ZNF461Q8TAF7 563 aa19.64■□□□□ 0.73
PBX3-205ENST00000373492 BPIFA3Q9BQP9 254 aa19.64■□□□□ 0.73
PBX3-205ENST00000373492 POMKQ9H5K3 350 aa19.64■□□□□ 0.73
PBX3-205ENST00000373492 SAMSN1Q9NSI8 373 aaKnown RBP19.64■□□□□ 0.73
PBX3-205ENST00000373492 COQ4Q9Y3A0 265 aa19.64■□□□□ 0.73
PBX3-205ENST00000373492 NR2E1Q9Y466 385 aa19.64■□□□□ 0.73
PBX3-205ENST00000373492 DOCK6Q96HP0 2047 aa19.63■□□□□ 0.73
PBX3-205ENST00000373492 SMTNL1A8MU46 457 aa19.63■□□□□ 0.73
PBX3-205ENST00000373492 PMM2O15305 246 aa19.63■□□□□ 0.73
PBX3-205ENST00000373492 HNRNPA1P09651 372 aaKnown RBP eCLIP19.63■□□□□ 0.73
PBX3-205ENST00000373492 WEE2P0C1S8 567 aa19.63■□□□□ 0.73
PBX3-205ENST00000373492 EEF1GP26641 437 aaKnown RBP19.63■□□□□ 0.73
PBX3-205ENST00000373492 ROR1Q01973 937 aa19.63■□□□□ 0.73
PBX3-205ENST00000373492 MAN2A1Q16706 1144 aa19.63■□□□□ 0.73
PBX3-205ENST00000373492 AOPEPQ8N6M6 819 aa19.63■□□□□ 0.73
PBX3-205ENST00000373492 RPGRIP1Q96KN7 1286 aa19.63■□□□□ 0.73
PBX3-205ENST00000373492 PI4K2AQ9BTU6 479 aa19.63■□□□□ 0.73
PBX3-205ENST00000373492 PRKD2Q9BZL6 878 aa19.63■□□□□ 0.73
PBX3-205ENST00000373492 SNX25Q9H3E2 840 aa19.63■□□□□ 0.73
PBX3-205ENST00000373492 DDX43Q9NXZ2 648 aaKnown RBP19.63■□□□□ 0.73
PBX3-205ENST00000373492 CDH22Q9UJ99 828 aa19.63■□□□□ 0.73
PBX3-205ENST00000373492 MAFFQ9ULX9 164 aa19.63■□□□□ 0.73
PBX3-205ENST00000373492 TACC1O75410 805 aa19.62■□□□□ 0.73
PBX3-205ENST00000373492 RFPL2O75678 378 aa19.62■□□□□ 0.73
PBX3-205ENST00000373492 ABLIM3O94929 683 aa19.62■□□□□ 0.73
PBX3-205ENST00000373492 CAVIN2O95810 425 aa19.62■□□□□ 0.73
PBX3-205ENST00000373492 TPM2P07951 284 aa19.62■□□□□ 0.73
PBX3-205ENST00000373492 PRKCSHP14314 528 aaPredicted RBP19.62■□□□□ 0.73
PBX3-205ENST00000373492 PCSK1P29120 753 aa19.62■□□□□ 0.73
PBX3-205ENST00000373492 HOXA9P31269 272 aa19.62■□□□□ 0.73
PBX3-205ENST00000373492 ZNF165P49910 485 aa19.62■□□□□ 0.73
PBX3-205ENST00000373492 TCP11X2Q5H9J9 407 aa19.62■□□□□ 0.73
PBX3-205ENST00000373492 TPGS2Q68CL5 300 aa19.62■□□□□ 0.73
PBX3-205ENST00000373492 SPOPLQ6IQ16 392 aa19.62■□□□□ 0.73
PBX3-205ENST00000373492 CCDC149Q6ZUS6 474 aa19.62■□□□□ 0.73
PBX3-205ENST00000373492 LIMS2Q7Z4I7 341 aa19.62■□□□□ 0.73
PBX3-205ENST00000373492 ANKRD20A12PQ8NF67 263 aa19.62■□□□□ 0.73
PBX3-205ENST00000373492 SEMA4DQ92854 862 aa19.62■□□□□ 0.73
PBX3-205ENST00000373492 ZNF707Q96C28 371 aaPredicted RBP19.62■□□□□ 0.73
PBX3-205ENST00000373492 TUBGCP2Q9BSJ2 902 aa19.62■□□□□ 0.73
PBX3-205ENST00000373492 FANCLQ9NW38 375 aa19.62■□□□□ 0.73
PBX3-205ENST00000373492 POLIQ9UNA4 740 aa19.62■□□□□ 0.73
PBX3-205ENST00000373492 USTQ9Y2C2 406 aa19.62■□□□□ 0.73
PBX3-205ENST00000373492 GREB1Q4ZG55 1949 aa19.62■□□□□ 0.73
PBX3-205ENST00000373492 ZNF638Q14966 1978 aaKnown RBP19.61■□□□□ 0.73
PBX3-205ENST00000373492 WDR27A2RRH5 827 aa19.61■□□□□ 0.73
PBX3-205ENST00000373492 GABRDO14764 452 aa19.61■□□□□ 0.73
PBX3-205ENST00000373492 C8AP07357 584 aa19.61■□□□□ 0.73
PBX3-205ENST00000373492 POU2F2P09086 479 aa19.61■□□□□ 0.73
PBX3-205ENST00000373492 WARSP23381 471 aaKnown RBP19.61■□□□□ 0.73
PBX3-205ENST00000373492 ELF1P32519 619 aa19.61■□□□□ 0.73
PBX3-205ENST00000373492 TSPY1Q01534 308 aa19.61■□□□□ 0.73
PBX3-205ENST00000373492 PPM1LQ5SGD2 360 aa19.61■□□□□ 0.73
PBX3-205ENST00000373492 SCARA5Q6ZMJ2 495 aa19.61■□□□□ 0.73
PBX3-205ENST00000373492 DCP1BQ8IZD4 617 aaKnown RBP19.61■□□□□ 0.73
PBX3-205ENST00000373492 OR6B3Q8NGW1 331 aa19.61■□□□□ 0.73
PBX3-205ENST00000373492 SMG7Q92540 1137 aaKnown RBP19.61■□□□□ 0.73
PBX3-205ENST00000373492 FAXDC2Q96IV6 333 aa19.61■□□□□ 0.73
PBX3-205ENST00000373492 ACBD6Q9BR61 282 aa19.61■□□□□ 0.73
PBX3-205ENST00000373492 NIF3L1Q9GZT8 377 aa19.61■□□□□ 0.73
PBX3-205ENST00000373492 WDR6Q9NNW5 1121 aaKnown RBP19.61■□□□□ 0.73
PBX3-205ENST00000373492 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.61■□□□□ 0.731e-18■■■■■ 447.2
PBX3-205ENST00000373492 BECN2A8MW95 431 aa19.6■□□□□ 0.73
PBX3-205ENST00000373492 ATF2P15336 505 aa19.6■□□□□ 0.73
PBX3-205ENST00000373492 CDK11BP21127 795 aaKnown RBP19.6■□□□□ 0.73
PBX3-205ENST00000373492 GNL1P36915 607 aaPredicted RBP19.6■□□□□ 0.73
PBX3-205ENST00000373492 SMARCB1Q12824 385 aa19.6■□□□□ 0.73
PBX3-205ENST00000373492 CDKAL1Q5VV42 579 aa19.6■□□□□ 0.73
PBX3-205ENST00000373492 RNF135Q8IUD6 432 aa19.6■□□□□ 0.73
PBX3-205ENST00000373492 OR10T2Q8NGX3 314 aa19.6■□□□□ 0.73
PBX3-205ENST00000373492 SLC7A14Q8TBB6 771 aa19.6■□□□□ 0.73
PBX3-205ENST00000373492 FEZF2Q8TBJ5 459 aa19.6■□□□□ 0.73
PBX3-205ENST00000373492 KBTBD7Q8WVZ9 684 aa19.6■□□□□ 0.73
PBX3-205ENST00000373492 ELMO3Q96BJ8 720 aa19.6■□□□□ 0.73
PBX3-205ENST00000373492 ZCWPW1Q9H0M4 648 aa19.6■□□□□ 0.73
PBX3-205ENST00000373492 PIDD1Q9HB75 910 aa19.6■□□□□ 0.73
PBX3-205ENST00000373492 DENND4CQ5VZ89 1909 aa19.6■□□□□ 0.73
PBX3-205ENST00000373492 DENND4AQ7Z401 1863 aa19.6■□□□□ 0.73
PBX3-205ENST00000373492 PI4K2BG5E9Z4 385 aa19.59■□□□□ 0.73
PBX3-205ENST00000373492 PES1O00541 588 aaKnown RBP19.59■□□□□ 0.73
PBX3-205ENST00000373492 XYLBO75191 536 aa19.59■□□□□ 0.73
PBX3-205ENST00000373492 OR4Q2P0C623 313 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms