RNA–Protein interactions for RNA: ENST00000373388.6

CSMD2-206, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSMD2, Length 13,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-206ENST00000373388 PSMA2P25787 234 aa7.31□□□□□ -1.24
CSMD2-206ENST00000373388 GRIK1P39086 918 aa7.31□□□□□ -1.24
CSMD2-206ENST00000373388 CDKL3Q8IVW4 592 aaPredicted RBP7.31□□□□□ -1.24
CSMD2-206ENST00000373388 INTS2Q9H0H0 1204 aaKnown RBP7.31□□□□□ -1.24
CSMD2-206ENST00000373388 SAMSN1Q9NSI8 373 aaKnown RBP7.31□□□□□ -1.24
CSMD2-206ENST00000373388 SYNPO2Q9UMS6 1093 aa7.31□□□□□ -1.24
CSMD2-206ENST00000373388 DDX39AO00148 427 aaKnown RBP7.31□□□□□ -1.24
CSMD2-206ENST00000373388 UBOX5O94941 541 aa7.31□□□□□ -1.24
CSMD2-206ENST00000373388 LIG4P49917 911 aa7.31□□□□□ -1.24
CSMD2-206ENST00000373388 FBXO42Q6P3S6 717 aa7.31□□□□□ -1.24
CSMD2-206ENST00000373388 DHX40Q8IX18 779 aaKnown RBP7.31□□□□□ -1.24
CSMD2-206ENST00000373388 ZBTB8BQ8NAP8 495 aaPredicted RBP7.31□□□□□ -1.24
CSMD2-206ENST00000373388 KCTD4Q8WVF5 259 aa7.31□□□□□ -1.24
CSMD2-206ENST00000373388 ILKAPQ9H0C8 392 aaPredicted RBP7.31□□□□□ -1.24
CSMD2-206ENST00000373388 TRIM10Q9UDY6 481 aa7.31□□□□□ -1.24
CSMD2-206ENST00000373388 AP3M1Q9Y2T2 418 aa7.31□□□□□ -1.24
CSMD2-206ENST00000373388 TRIM43BA6NCK2 446 aa7.31□□□□□ -1.24
CSMD2-206ENST00000373388 HNRNPDLO14979 420 aaKnown RBP7.31□□□□□ -1.24
CSMD2-206ENST00000373388 IFNA14P01570 189 aa7.31□□□□□ -1.24
CSMD2-206ENST00000373388 NCKAP1LP55160 1127 aa7.31□□□□□ -1.24
CSMD2-206ENST00000373388 TTC39BQ5VTQ0 682 aaPredicted RBP7.31□□□□□ -1.24
CSMD2-206ENST00000373388 IZUMO3Q5VZ72 239 aa7.31□□□□□ -1.24
CSMD2-206ENST00000373388 DSTYKQ6XUX3 929 aa7.31□□□□□ -1.24
CSMD2-206ENST00000373388 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.31□□□□□ -1.24
CSMD2-206ENST00000373388 EIF1ADQ8N9N8 165 aaKnown RBP7.31□□□□□ -1.24
CSMD2-206ENST00000373388 OR6Y1Q8NGX8 325 aa7.31□□□□□ -1.24
CSMD2-206ENST00000373388 TCEAL3Q969E4 200 aa7.31□□□□□ -1.24
CSMD2-206ENST00000373388 ZNF224Q9NZL3 707 aa7.31□□□□□ -1.24
CSMD2-206ENST00000373388 ZC3H7BQ9UGR2 993 aaKnown RBP7.31□□□□□ -1.24
CSMD2-206ENST00000373388 GRID1Q9ULK0 1009 aa7.31□□□□□ -1.24
CSMD2-206ENST00000373388 RUVBL2Q9Y230 463 aaKnown RBP7.31□□□□□ -1.24
CSMD2-206ENST00000373388 MAP3K19Q56UN5 1328 aa7.31□□□□□ -1.24
CSMD2-206ENST00000373388 IFT140Q96RY7 1462 aa7.31□□□□□ -1.24
CSMD2-206ENST00000373388 USP27XA6NNY8 438 aa7.31□□□□□ -1.24
CSMD2-206ENST00000373388 H7C2Y5 167 aa7.31□□□□□ -1.24
CSMD2-206ENST00000373388 ENO2P09104 434 aaPredicted RBP7.31□□□□□ -1.24
CSMD2-206ENST00000373388 FLT3P36888 993 aa7.31□□□□□ -1.24
CSMD2-206ENST00000373388 RHOT1Q8IXI2 618 aa7.31□□□□□ -1.24
CSMD2-206ENST00000373388 ACMSDQ8TDX5 336 aa7.31□□□□□ -1.24
CSMD2-206ENST00000373388 GJA10Q969M2 543 aa7.31□□□□□ -1.24
CSMD2-206ENST00000373388 VPS11Q9H270 941 aa7.31□□□□□ -1.24
CSMD2-206ENST00000373388 A0A0X1KG70 313 aa7.31□□□□□ -1.24
CSMD2-206ENST00000373388 ANXA6P08133 673 aa7.31□□□□□ -1.24
CSMD2-206ENST00000373388 CRKP46108 304 aa7.31□□□□□ -1.24
CSMD2-206ENST00000373388 BLMHQ13867 455 aa7.31□□□□□ -1.24
CSMD2-206ENST00000373388 FAM98BQ52LJ0 330 aaKnown RBP7.31□□□□□ -1.24
CSMD2-206ENST00000373388 ANKRD26P1Q6NSI1 321 aa7.31□□□□□ -1.24
CSMD2-206ENST00000373388 BNIPLQ7Z465 357 aa7.31□□□□□ -1.24
CSMD2-206ENST00000373388 SH3TC2Q8TF17 1288 aa7.31□□□□□ -1.24
CSMD2-206ENST00000373388 SETDB2Q96T68 719 aa7.31□□□□□ -1.24
CSMD2-206ENST00000373388 SLC12A6Q9UHW9 1150 aa7.31□□□□□ -1.24
CSMD2-206ENST00000373388 KIF1BO60333 1816 aa7.31□□□□□ -1.24
CSMD2-206ENST00000373388 IRS4O14654 1257 aaPredicted RBP7.31□□□□□ -1.24
CSMD2-206ENST00000373388 TRAPPC3O43617 180 aa7.31□□□□□ -1.24
CSMD2-206ENST00000373388 EIF3MQ7L2H7 374 aaKnown RBP7.31□□□□□ -1.24
CSMD2-206ENST00000373388 CROTQ9UKG9 612 aa7.31□□□□□ -1.24
CSMD2-206ENST00000373388 ARHGEF10O15013 1369 aa7.31□□□□□ -1.24
CSMD2-206ENST00000373388 ABCC4O15439 1325 aa7.31□□□□□ -1.24
CSMD2-206ENST00000373388 A0A087WWV3 80 aa7.31□□□□□ -1.24
CSMD2-206ENST00000373388 CHP2O43745 196 aa7.31□□□□□ -1.24
CSMD2-206ENST00000373388 DLATP10515 647 aaKnown RBP7.31□□□□□ -1.24
CSMD2-206ENST00000373388 MAGEA4P43358 317 aa7.31□□□□□ -1.24
CSMD2-206ENST00000373388 RCAN1P53805 252 aa7.31□□□□□ -1.24
CSMD2-206ENST00000373388 ROR1Q01973 937 aa7.31□□□□□ -1.24
CSMD2-206ENST00000373388 MEI1Q5TIA1 1274 aa7.31□□□□□ -1.24
CSMD2-206ENST00000373388 ERO1BQ86YB8 467 aa7.31□□□□□ -1.24
CSMD2-206ENST00000373388 GPAMQ9HCL2 828 aa7.31□□□□□ -1.24
CSMD2-206ENST00000373388 SLC26A4O43511 780 aa7.31□□□□□ -1.24
CSMD2-206ENST00000373388 NET1Q7Z628 596 aaPredicted RBP7.31□□□□□ -1.24
CSMD2-206ENST00000373388 CMTR1Q8N1G2 835 aaKnown RBP7.31□□□□□ -1.24
CSMD2-206ENST00000373388 DEPTORQ8TB45 409 aa7.31□□□□□ -1.24
CSMD2-206ENST00000373388 WHRNQ9P202 907 aa7.31□□□□□ -1.24
CSMD2-206ENST00000373388 CCNKO75909 580 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 CCNE2O96020 404 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 FASP25445 335 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 ZNF284Q2VY69 593 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 TAB3Q8N5C8 712 aaPredicted RBP7.3□□□□□ -1.24
CSMD2-206ENST00000373388 E2F7Q96AV8 911 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 DMRT2Q9Y5R5 561 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 LRRN2O75325 713 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 VAV1P15498 845 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 TCF4P15884 667 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 CAPGP40121 348 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 BARGINQ6ZT62 677 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 VPS33AQ96AX1 596 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 SH3BP4Q9P0V3 963 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 DDX25Q9UHL0 483 aaKnown RBP7.3□□□□□ -1.24
CSMD2-206ENST00000373388 SIN3BO75182 1162 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 SNRPAP09012 282 aaKnown RBP7.3□□□□□ -1.24
CSMD2-206ENST00000373388 RAG1P15918 1043 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 PRLRP16471 622 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 TNNI3KQ59H18 835 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 DHDDSQ86SQ9 333 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 CABLES1Q8TDN4 633 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 ERP44Q9BS26 406 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 FPGT-TNNI3KV9GXZ4 949 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 ABCC1P33527 1531 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.3□□□□□ -1.24
CSMD2-206ENST00000373388 PDPK1O15530 556 aa7.3□□□□□ -1.24
CSMD2-206ENST00000373388 GEMIN4P57678 1058 aaKnown RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms