RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 SPIRE1Q08AE8 756 aa12.71□□□□□ -0.37
NCDN-202ENST00000373243 TTLL12Q14166 644 aaPredicted RBP12.71□□□□□ -0.37
NCDN-202ENST00000373243 KIF22Q14807 665 aa12.71□□□□□ -0.37
NCDN-202ENST00000373243 GRAMD4Q6IC98 578 aa12.71□□□□□ -0.37
NCDN-202ENST00000373243 SLFN11Q7Z7L1 901 aa12.71□□□□□ -0.37
NCDN-202ENST00000373243 NMD3Q96D46 503 aaKnown RBP12.71□□□□□ -0.37
NCDN-202ENST00000373243 GMCL1Q96IK5 515 aa12.71□□□□□ -0.37
NCDN-202ENST00000373243 NLRP4Q96MN2 994 aa12.71□□□□□ -0.37
NCDN-202ENST00000373243 RIT2Q99578 217 aa12.71□□□□□ -0.37
NCDN-202ENST00000373243 BRD8Q9H0E9 1235 aa12.71□□□□□ -0.37
NCDN-202ENST00000373243 GRHL1Q9NZI5 618 aa12.71□□□□□ -0.37
NCDN-202ENST00000373243 FRMPD4Q14CM0 1322 aa12.71□□□□□ -0.37
NCDN-202ENST00000373243 CALB2P22676 271 aa12.71□□□□□ -0.38
NCDN-202ENST00000373243 SSTR1P30872 391 aa12.71□□□□□ -0.38
NCDN-202ENST00000373243 KDSRQ06136 332 aa12.71□□□□□ -0.38
NCDN-202ENST00000373243 NFX1Q12986 1120 aaKnown RBP12.71□□□□□ -0.38
NCDN-202ENST00000373243 LBRQ14739 615 aaKnown RBP12.71□□□□□ -0.38
NCDN-202ENST00000373243 FAXCQ5TGI0 409 aa12.71□□□□□ -0.38
NCDN-202ENST00000373243 BTNL9Q6UXG8 535 aa12.71□□□□□ -0.38
NCDN-202ENST00000373243 LENG9Q96B70 501 aa12.71□□□□□ -0.38
NCDN-202ENST00000373243 NR1H4Q96RI1 486 aaPredicted RBP12.71□□□□□ -0.38
NCDN-202ENST00000373243 C12orf65Q9H3J6 166 aaKnown RBP12.71□□□□□ -0.38
NCDN-202ENST00000373243 SMYD3Q9H7B4 428 aa12.71□□□□□ -0.38
NCDN-202ENST00000373243 SLC9A2Q9UBY0 812 aa12.71□□□□□ -0.38
NCDN-202ENST00000373243 CNOT7Q9UIV1 285 aaKnown RBP12.71□□□□□ -0.38
NCDN-202ENST00000373243 STXBP5LQ9Y2K9 1186 aa12.71□□□□□ -0.38
NCDN-202ENST00000373243 ASB3Q9Y575 518 aa12.71□□□□□ -0.38
NCDN-202ENST00000373243 SCINQ9Y6U3 715 aa12.71□□□□□ -0.38
NCDN-202ENST00000373243 MCF2LO15068 1137 aa12.7□□□□□ -0.38
NCDN-202ENST00000373243 GRAP2O75791 330 aa12.7□□□□□ -0.38
NCDN-202ENST00000373243 NAT1P18440 290 aa12.7□□□□□ -0.38
NCDN-202ENST00000373243 ARFIP2P53365 341 aa12.7□□□□□ -0.38
NCDN-202ENST00000373243 ARL4CP56559 192 aa12.7□□□□□ -0.38
NCDN-202ENST00000373243 SNRNP48Q6IEG0 339 aaKnown RBP12.7□□□□□ -0.38
NCDN-202ENST00000373243 C1orf228Q6PIY5 440 aa12.7□□□□□ -0.38
NCDN-202ENST00000373243 NIM1KQ8IY84 436 aa12.7□□□□□ -0.38
NCDN-202ENST00000373243 TMEM35BQ8NCS4 154 aa12.7□□□□□ -0.38
NCDN-202ENST00000373243 C1orf131Q8NDD1 294 aaKnown RBP12.7□□□□□ -0.38
NCDN-202ENST00000373243 FAM161BQ96MY7 647 aa12.7□□□□□ -0.38
NCDN-202ENST00000373243 RANBP17Q9H2T7 1088 aaKnown RBP12.7□□□□□ -0.38
NCDN-202ENST00000373243 RNPEPL1Q9HAU8 725 aa12.7□□□□□ -0.38
NCDN-202ENST00000373243 FEM1BQ9UK73 627 aa12.7□□□□□ -0.38
NCDN-202ENST00000373243 TJP1Q07157 1748 aa12.7□□□□□ -0.38
NCDN-202ENST00000373243 NUP188Q5SRE5 1749 aa12.7□□□□□ -0.38
NCDN-202ENST00000373243 CST8O60676 142 aa12.7□□□□□ -0.38
NCDN-202ENST00000373243 GTF2H1P32780 548 aa12.7□□□□□ -0.38
NCDN-202ENST00000373243 ZBTB45Q96K62 511 aaPredicted RBP12.7□□□□□ -0.38
NCDN-202ENST00000373243 DCLK3Q9C098 648 aa12.7□□□□□ -0.38
NCDN-202ENST00000373243 NACA2Q9H009 215 aa12.7□□□□□ -0.38
NCDN-202ENST00000373243 ZDHHC18Q9NUE0 388 aa12.7□□□□□ -0.38
NCDN-202ENST00000373243 DNPEPQ9ULA0 475 aa12.7□□□□□ -0.38
NCDN-202ENST00000373243 NCANO14594 1321 aa12.7□□□□□ -0.38
NCDN-202ENST00000373243 E2F8A0AVK6 867 aa12.7□□□□□ -0.38
NCDN-202ENST00000373243 C5orf60A6NFR6 353 aa12.7□□□□□ -0.38
NCDN-202ENST00000373243 POLRMTO00411 1230 aaKnown RBP12.7□□□□□ -0.38
NCDN-202ENST00000373243 LPXNO60711 386 aa12.7□□□□□ -0.38
NCDN-202ENST00000373243 RXRBP28702 533 aa12.7□□□□□ -0.38
NCDN-202ENST00000373243 EPHB2P29323 1055 aa12.7□□□□□ -0.38
NCDN-202ENST00000373243 POLR2BP30876 1174 aaKnown RBP12.7□□□□□ -0.38
NCDN-202ENST00000373243 COG7P83436 770 aa12.7□□□□□ -0.38
NCDN-202ENST00000373243 MTDHQ86UE4 582 aaKnown RBP12.7□□□□□ -0.38
NCDN-202ENST00000373243 WDR60Q8WVS4 1066 aa12.7□□□□□ -0.38
NCDN-202ENST00000373243 RMDN2Q96LZ7 410 aa12.7□□□□□ -0.38
NCDN-202ENST00000373243 ARHGEF38Q9NXL2 777 aa12.7□□□□□ -0.38
NCDN-202ENST00000373243 ZNF510Q9Y2H8 683 aa12.7□□□□□ -0.38
NCDN-202ENST00000373243 ENTPD5O75356 428 aa12.69□□□□□ -0.38
NCDN-202ENST00000373243 PSAPP07602 524 aa12.69□□□□□ -0.38
NCDN-202ENST00000373243 MLH1P40692 756 aa12.69□□□□□ -0.38
NCDN-202ENST00000373243 PSMC1P62191 440 aaKnown RBP12.69□□□□□ -0.38
NCDN-202ENST00000373243 KRT76Q01546 638 aa12.69□□□□□ -0.38
NCDN-202ENST00000373243 OR6B2Q6IFH4 312 aa12.69□□□□□ -0.38
NCDN-202ENST00000373243 MCOLN2Q8IZK6 566 aa12.69□□□□□ -0.38
NCDN-202ENST00000373243 TLCD1Q96CP7 247 aa12.69□□□□□ -0.38
NCDN-202ENST00000373243 FAF2Q96CS3 445 aa12.69□□□□□ -0.38
NCDN-202ENST00000373243 CCDC124Q96CT7 223 aaKnown RBP12.69□□□□□ -0.38
NCDN-202ENST00000373243 SEPT10Q9P0V9 454 aa12.69□□□□□ -0.38
NCDN-202ENST00000373243 WHRNQ9P202 907 aa12.69□□□□□ -0.38
NCDN-202ENST00000373243 PCYOX1Q9UHG3 505 aa12.69□□□□□ -0.38
NCDN-202ENST00000373243 TTLL3Q9Y4R7 772 aa12.69□□□□□ -0.38
NCDN-202ENST00000373243 NUP98P52948 1817 aa12.69□□□□□ -0.38
NCDN-202ENST00000373243 SRRM3A6NNA2 597 aaPredicted RBP12.69□□□□□ -0.38
NCDN-202ENST00000373243 O00370 1275 aa12.69□□□□□ -0.38
NCDN-202ENST00000373243 CIITAP33076 1130 aa12.69□□□□□ -0.38
NCDN-202ENST00000373243 EPHB1P54762 984 aa12.69□□□□□ -0.38
NCDN-202ENST00000373243 PPP2R5CQ13362 524 aa12.69□□□□□ -0.38
NCDN-202ENST00000373243 MFSD7Q6UXD7 560 aa12.69□□□□□ -0.38
NCDN-202ENST00000373243 SH3BP5LQ7L8J4 393 aa12.69□□□□□ -0.38
NCDN-202ENST00000373243 CYP4X1Q8N118 509 aa12.69□□□□□ -0.38
NCDN-202ENST00000373243 FITM2Q8N6M3 262 aa12.69□□□□□ -0.38
NCDN-202ENST00000373243 EMC1Q8N766 993 aa12.69□□□□□ -0.38
NCDN-202ENST00000373243 STK32AQ8WU08 396 aa12.69□□□□□ -0.38
NCDN-202ENST00000373243 DNAJC1Q96KC8 554 aaKnown RBP12.69□□□□□ -0.38
NCDN-202ENST00000373243 TRAPPC9Q96Q05 1148 aa12.69□□□□□ -0.38
NCDN-202ENST00000373243 SHCBP1LQ9BZQ2 653 aa12.69□□□□□ -0.38
NCDN-202ENST00000373243 FHDC1Q9C0D6 1143 aaPredicted RBP12.69□□□□□ -0.38
NCDN-202ENST00000373243 PARVAQ9NVD7 372 aa12.69□□□□□ -0.38
NCDN-202ENST00000373243 HERC5Q9UII4 1024 aaKnown RBP12.69□□□□□ -0.38
NCDN-202ENST00000373243 TMCO1Q9UM00 188 aa12.69□□□□□ -0.38
NCDN-202ENST00000373243 TRIM43BA6NCK2 446 aa12.69□□□□□ -0.38
NCDN-202ENST00000373243 NDUFB5O43674 189 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms