RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 AKAP14Q86UN6 197 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 RIN2Q8WYP3 895 aaPredicted RBP6.89□□□□□ -1.31
CHD6-203ENST00000373233 MLPHQ9BV36 600 aaPredicted RBP6.89□□□□□ -1.31
CHD6-203ENST00000373233 FAM96AQ9H5X1 160 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 METTL14Q9HCE5 456 aaKnown RBP6.89□□□□□ -1.31
CHD6-203ENST00000373233 ADGRA3Q8IWK6 1321 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 A6NJR5 290 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 SPDYE16A6NNV3 312 aaPredicted RBP6.89□□□□□ -1.31
CHD6-203ENST00000373233 TAL1P17542 331 aaPredicted RBP6.89□□□□□ -1.31
CHD6-203ENST00000373233 MXI1P50539 228 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 FXR2P51116 673 aaKnown RBP eCLIP6.89□□□□□ -1.317e-7■■□□□ 14
CHD6-203ENST00000373233 CAV1Q03135 178 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 TKFCQ3LXA3 575 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 C9orf131Q5VYM1 1079 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 PDXDC2PQ6P474 469 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 PADI6Q6TGC4 694 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 RMND5BQ96G75 393 aaPredicted RBP6.89□□□□□ -1.31
CHD6-203ENST00000373233 GCNT4Q9P109 453 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 NPM3O75607 178 aaKnown RBP6.89□□□□□ -1.31
CHD6-203ENST00000373233 GARSP41250 739 aaKnown RBP6.89□□□□□ -1.31
CHD6-203ENST00000373233 GALK1P51570 392 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 PMS2P54278 862 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 TSC22D1Q15714 1073 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 NEK10Q6ZWH5 1172 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 AGBL1Q96MI9 1066 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 UBN1Q9NPG3 1134 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 EMILIN3Q9NT22 766 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 ABCF3Q9NUQ8 709 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 CCNCP24863 283 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 INPP5AQ14642 412 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 C15orf59Q2T9L4 293 aaPredicted RBP6.89□□□□□ -1.31
CHD6-203ENST00000373233 DPP9Q86TI2 863 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 ZNF786Q8N393 782 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 DRAXINQ8NBI3 349 aaPredicted RBP6.89□□□□□ -1.31
CHD6-203ENST00000373233 PHC3Q8NDX5 983 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 RBM46Q8TBY0 533 aaKnown RBP6.89□□□□□ -1.31
CHD6-203ENST00000373233 VTI1AQ96AJ9 217 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 TRIM9Q9C026 710 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 TUBE1Q9UJT0 475 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 EVPLLA8MZ36 301 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 KRT37O76014 449 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 CCDC130P13994 396 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 PPP4R3CPQ6ZMV5 832 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 MMP19Q99542 508 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 SLC39A3Q9BRY0 314 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 DNAAF2Q9NVR5 837 aaKnown RBP6.89□□□□□ -1.31
CHD6-203ENST00000373233 MPP6Q9NZW5 540 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 STK39Q9UEW8 545 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 DIS3Q9Y2L1 958 aaKnown RBP6.89□□□□□ -1.31
CHD6-203ENST00000373233 IQANK1A0A1B0GTG1 560 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 WNT10BO00744 389 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 RPS6KA5O75582 802 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 STAM2O75886 525 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 STAT1P42224 750 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 FMR1Q06787 632 aaKnown RBP eCLIP6.89□□□□□ -1.311e-6■■■■□ 23.7
CHD6-203ENST00000373233 PRR23CQ6ZRP0 262 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 ZBTB8OSQ8IWT0 167 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 TRABDQ9H4I3 376 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 HPSEQ9Y251 543 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 TMED5Q9Y3A6 229 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 C10orf71Q711Q0 1435 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 LRRIQ4A6NIV6 560 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 PSTPIP1O43586 416 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 NR3C1P04150 777 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 ATP1A1P05023 1023 aaKnown RBP6.89□□□□□ -1.31
CHD6-203ENST00000373233 FCER1AP12319 257 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 ELF3P78545 371 aaPredicted RBP6.89□□□□□ -1.31
CHD6-203ENST00000373233 ARMCX4Q5H9R4 360 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 RNASE11Q8TAA1 199 aaKnown RBP6.89□□□□□ -1.31
CHD6-203ENST00000373233 ATP6V1E2Q96A05 226 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 CLEC4MQ9H2X3 399 aaPredicted RBP6.89□□□□□ -1.31
CHD6-203ENST00000373233 SLITRK6Q9H5Y7 841 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 DCLRE1BQ9H816 532 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 KMT5AQ9NQR1 393 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 L3MBTL1Q9Y468 752 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 SPEF1Q9Y4P9 236 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 PPME1Q9Y570 386 aa6.89□□□□□ -1.31
CHD6-203ENST00000373233 NOTOA8MTQ0 251 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 LIG4P49917 911 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 ZNF354CQ86Y25 554 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 TBC1D22BQ9NU19 505 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 FBXO28Q9NVF7 368 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 TBX3O15119 743 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 TBC1D4O60343 1298 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 HSPA4LO95757 839 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 PPARGP37231 505 aaPredicted RBP6.88□□□□□ -1.31
CHD6-203ENST00000373233 C6orf183Q5T699 404 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 DPH6Q7L8W6 267 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 TTC17Q96AE7 1141 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 PBXIP1Q96AQ6 731 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 MMS19Q96T76 1030 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 TUFT1Q9NNX1 390 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 SCN9AQ15858 1988 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 IL10P22301 178 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 SNX30Q5VWJ9 437 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 ZNF555Q8NEP9 628 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 PRCCQ92733 491 aaPredicted RBP6.88□□□□□ -1.31
CHD6-203ENST00000373233 ARL8AQ96BM9 186 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 WWP1Q9H0M0 922 aa6.88□□□□□ -1.31
CHD6-203ENST00000373233 COL11A2P13942 1736 aaPredicted RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms