RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 MGARPQ8TDB4 240 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 LPAR1Q92633 364 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 TLCD1Q96CP7 247 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 MFSD14AQ96MC6 490 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 FBXL18Q96ME1 805 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 TARS2Q9BW92 718 aaKnown RBP6.78□□□□□ -1.32
CHD6-202ENST00000373222 ST6GALNAC4Q9H4F1 302 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 TMEM134Q9H6X4 195 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 CYP26B1Q9NR63 512 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.78□□□□□ -1.32
CHD6-202ENST00000373222 GTF3C4Q9UKN8 822 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 COQ4Q9Y3A0 265 aa6.78□□□□□ -1.32
CHD6-202ENST00000373222 LRRIQ4A6NIV6 560 aa6.77□□□□□ -1.32
CHD6-202ENST00000373222 HGSO14964 777 aaPredicted RBP6.77□□□□□ -1.32
CHD6-202ENST00000373222 RIPK2O43353 540 aa6.77□□□□□ -1.32
CHD6-202ENST00000373222 CTNND1O60716 968 aaKnown RBP6.77□□□□□ -1.32
CHD6-202ENST00000373222 ZBED4O75132 1171 aa6.77□□□□□ -1.32
CHD6-202ENST00000373222 GH1P01241 217 aa6.77□□□□□ -1.32
CHD6-202ENST00000373222 HLA-DRAP01903 254 aa6.77□□□□□ -1.32
CHD6-202ENST00000373222 GJB1P08034 283 aa6.77□□□□□ -1.32
CHD6-202ENST00000373222 VDRP11473 427 aa6.77□□□□□ -1.32
CHD6-202ENST00000373222 GZMAP12544 262 aa6.77□□□□□ -1.32
CHD6-202ENST00000373222 UNGP13051 313 aaPredicted RBP6.77□□□□□ -1.32
CHD6-202ENST00000373222 KRT10P13645 584 aa6.77□□□□□ -1.32
CHD6-202ENST00000373222 PTPRAP18433 802 aa6.77□□□□□ -1.32
CHD6-202ENST00000373222 SCP2P22307 547 aa6.77□□□□□ -1.32
CHD6-202ENST00000373222 MAPK4P31152 587 aa6.77□□□□□ -1.32
CHD6-202ENST00000373222 CHRNA3P32297 505 aa6.77□□□□□ -1.32
CHD6-202ENST00000373222 RAB27AP51159 221 aa6.77□□□□□ -1.32
CHD6-202ENST00000373222 SMTNP53814 917 aa6.77□□□□□ -1.32
CHD6-202ENST00000373222 BACE1P56817 501 aa6.77□□□□□ -1.32
CHD6-202ENST00000373222 RPL7AP62424 266 aaKnown RBP6.77□□□□□ -1.32
CHD6-202ENST00000373222 KRT76Q01546 638 aa6.77□□□□□ -1.32
CHD6-202ENST00000373222 GHRHRQ02643 423 aa6.77□□□□□ -1.32
CHD6-202ENST00000373222 SGO2Q562F6 1265 aa6.77□□□□□ -1.32
CHD6-202ENST00000373222 DENND2CQ68D51 928 aa6.77□□□□□ -1.32
CHD6-202ENST00000373222 ACAD10Q6JQN1 1059 aa6.77□□□□□ -1.32
CHD6-202ENST00000373222 TMEM270Q6UE05 265 aa6.77□□□□□ -1.32
CHD6-202ENST00000373222 C6orf89Q6UWU4 347 aa6.77□□□□□ -1.32
CHD6-202ENST00000373222 ARMCX6Q7L4S7 300 aa6.77□□□□□ -1.32
CHD6-202ENST00000373222 MCOLN2Q8IZK6 566 aa6.77□□□□□ -1.32
CHD6-202ENST00000373222 GPD1LQ8N335 351 aa6.77□□□□□ -1.32
CHD6-202ENST00000373222 OTUD6BQ8N6M0 293 aa6.77□□□□□ -1.32
CHD6-202ENST00000373222 EIF1ADQ8N9N8 165 aaKnown RBP6.77□□□□□ -1.32
CHD6-202ENST00000373222 PRMT1Q99873 361 aaKnown RBP6.77□□□□□ -1.32
CHD6-202ENST00000373222 CDC42EP4Q9H3Q1 356 aaKnown RBP6.77□□□□□ -1.32
CHD6-202ENST00000373222 C10orf88Q9H8K7 445 aa6.77□□□□□ -1.32
CHD6-202ENST00000373222 JPH1Q9HDC5 661 aaPredicted RBP6.77□□□□□ -1.32
CHD6-202ENST00000373222 PDLIM7Q9NR12 457 aa6.77□□□□□ -1.32
CHD6-202ENST00000373222 CYP39A1Q9NYL5 469 aa6.77□□□□□ -1.32
CHD6-202ENST00000373222 FBXO40Q9UH90 709 aa6.77□□□□□ -1.32
CHD6-202ENST00000373222 TBK1Q9UHD2 729 aa6.77□□□□□ -1.32
CHD6-202ENST00000373222 PCYOX1Q9UHG3 505 aa6.77□□□□□ -1.32
CHD6-202ENST00000373222 MIF4GDA9UHW6 222 aaKnown RBP6.77□□□□□ -1.33
CHD6-202ENST00000373222 P4HA2O15460 535 aa6.77□□□□□ -1.33
CHD6-202ENST00000373222 CST3P01034 146 aaPredicted RBP6.77□□□□□ -1.33
CHD6-202ENST00000373222 RALAP11233 206 aa6.77□□□□□ -1.33
CHD6-202ENST00000373222 ETS1P14921 441 aa6.77□□□□□ -1.33
CHD6-202ENST00000373222 IVDP26440 423 aa6.77□□□□□ -1.33
CHD6-202ENST00000373222 CCND2P30279 289 aa6.77□□□□□ -1.33
CHD6-202ENST00000373222 SSR1P43307 286 aaKnown RBP6.77□□□□□ -1.33
CHD6-202ENST00000373222 EIF1AXP47813 144 aaKnown RBP6.77□□□□□ -1.33
CHD6-202ENST00000373222 JAK3P52333 1124 aa6.77□□□□□ -1.33
CHD6-202ENST00000373222 RWDD2BP57060 319 aa6.77□□□□□ -1.33
CHD6-202ENST00000373222 PRR20EP86478 221 aa6.77□□□□□ -1.33
CHD6-202ENST00000373222 PRR20CP86479 221 aa6.77□□□□□ -1.33
CHD6-202ENST00000373222 PRR20DP86480 221 aa6.77□□□□□ -1.33
CHD6-202ENST00000373222 PRR20BP86481 221 aa6.77□□□□□ -1.33
CHD6-202ENST00000373222 PRR20AP86496 221 aa6.77□□□□□ -1.33
CHD6-202ENST00000373222 ORC1Q13415 861 aa6.77□□□□□ -1.33
CHD6-202ENST00000373222 DHX34Q14147 1143 aaKnown RBP6.77□□□□□ -1.33
CHD6-202ENST00000373222 EMC2Q15006 297 aa6.77□□□□□ -1.33
CHD6-202ENST00000373222 PPP1R7Q15435 360 aa6.77□□□□□ -1.33
CHD6-202ENST00000373222 KYNUQ16719 465 aa6.77□□□□□ -1.33
CHD6-202ENST00000373222 ANGEL2Q5VTE6 544 aaKnown RBP6.77□□□□□ -1.33
CHD6-202ENST00000373222 ALG1LQ6GMV1 187 aa6.77□□□□□ -1.33
CHD6-202ENST00000373222 RUFY4Q6ZNE9 571 aa6.77□□□□□ -1.33
CHD6-202ENST00000373222 MMS22LQ6ZRQ5 1243 aa6.77□□□□□ -1.33
CHD6-202ENST00000373222 CCDC50Q8IVM0 306 aa6.77□□□□□ -1.33
CHD6-202ENST00000373222 CYP4X1Q8N118 509 aa6.77□□□□□ -1.33
CHD6-202ENST00000373222 TAB3Q8N5C8 712 aaPredicted RBP6.77□□□□□ -1.33
CHD6-202ENST00000373222 ATXN2LQ8WWM7 1075 aaKnown RBP6.77□□□□□ -1.33
CHD6-202ENST00000373222 HAUS1Q96CS2 278 aa6.77□□□□□ -1.33
CHD6-202ENST00000373222 SEC16BQ96JE7 1060 aa6.77□□□□□ -1.33
CHD6-202ENST00000373222 WNT8AQ9H1J5 351 aa6.77□□□□□ -1.33
CHD6-202ENST00000373222 TAOK3Q9H2K8 898 aa6.77□□□□□ -1.33
CHD6-202ENST00000373222 ANKEF1Q9NU02 776 aa6.77□□□□□ -1.33
CHD6-202ENST00000373222 ARHGAP28Q9P2N2 729 aa6.77□□□□□ -1.33
CHD6-202ENST00000373222 SLC9A2Q9UBY0 812 aa6.77□□□□□ -1.33
CHD6-202ENST00000373222 TJP2Q9UDY2 1190 aa6.77□□□□□ -1.33
CHD6-202ENST00000373222 CNOT7Q9UIV1 285 aaKnown RBP6.77□□□□□ -1.33
CHD6-202ENST00000373222 NUB1Q9Y5A7 615 aa6.77□□□□□ -1.33
CHD6-202ENST00000373222 PTPRFP10586 1907 aa6.77□□□□□ -1.33
CHD6-202ENST00000373222 ANK1P16157 1881 aa6.76□□□□□ -1.33
CHD6-202ENST00000373222 BRCA1P38398 1863 aaKnown RBP6.76□□□□□ -1.33
CHD6-202ENST00000373222 FAM187AA6NFU0 413 aa6.76□□□□□ -1.33
CHD6-202ENST00000373222 CSDE1O75534 798 aaKnown RBP6.76□□□□□ -1.33
CHD6-202ENST00000373222 MTA2O94776 668 aa6.76□□□□□ -1.33
CHD6-202ENST00000373222 ZSCAN5DPP0CG00 497 aa6.76□□□□□ -1.33
CHD6-202ENST00000373222 ACO1P21399 889 aaKnown RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms