RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 C12orf50Q8NA57 414 aaPredicted RBP20.76■□□□□ 0.91
TRAPPC3-204ENST00000373166 ZFYVE19Q96K21 471 aa20.76■□□□□ 0.91
TRAPPC3-204ENST00000373166 CRISPLD1Q9H336 500 aa20.76■□□□□ 0.91
TRAPPC3-204ENST00000373166 C2orf42Q9NWW7 574 aa20.76■□□□□ 0.91
TRAPPC3-204ENST00000373166 SEL1LQ9UBV2 794 aa20.76■□□□□ 0.91
TRAPPC3-204ENST00000373166 ANGPTL2Q9UKU9 493 aa20.76■□□□□ 0.91
TRAPPC3-204ENST00000373166 SLC27A5Q9Y2P5 690 aa20.76■□□□□ 0.91
TRAPPC3-204ENST00000373166 TICRRQ7Z2Z1 1910 aa20.76■□□□□ 0.91
TRAPPC3-204ENST00000373166 AXIN1O15169 862 aa20.75■□□□□ 0.91
TRAPPC3-204ENST00000373166 PIGRP01833 764 aa20.75■□□□□ 0.91
TRAPPC3-204ENST00000373166 CLTAP09496 248 aa20.75■□□□□ 0.91
TRAPPC3-204ENST00000373166 CXCL8P10145 99 aa20.75■□□□□ 0.91
TRAPPC3-204ENST00000373166 NMT1P30419 496 aaKnown RBP20.75■□□□□ 0.91
TRAPPC3-204ENST00000373166 LIMK1P53667 647 aa20.75■□□□□ 0.91
TRAPPC3-204ENST00000373166 PLCB2Q00722 1185 aa20.75■□□□□ 0.91
TRAPPC3-204ENST00000373166 SPAG1Q07617 926 aa20.75■□□□□ 0.91
TRAPPC3-204ENST00000373166 MCL1Q07820 350 aa20.75■□□□□ 0.91
TRAPPC3-204ENST00000373166 GPR158Q5T848 1215 aa20.75■□□□□ 0.91
TRAPPC3-204ENST00000373166 GAREM2Q75VX8 874 aa20.75■□□□□ 0.91
TRAPPC3-204ENST00000373166 ITIH5Q86UX2 942 aa20.75■□□□□ 0.91
TRAPPC3-204ENST00000373166 PSMG2Q969U7 264 aa20.75■□□□□ 0.91
TRAPPC3-204ENST00000373166 KIF12Q96FN5 646 aa20.75■□□□□ 0.91
TRAPPC3-204ENST00000373166 LOXL4Q96JB6 756 aa20.75■□□□□ 0.91
TRAPPC3-204ENST00000373166 LRRC3BQ96PB8 259 aa20.75■□□□□ 0.91
TRAPPC3-204ENST00000373166 MKNK1Q9BUB5 465 aa20.75■□□□□ 0.91
TRAPPC3-204ENST00000373166 LRRC27Q9C0I9 530 aa20.75■□□□□ 0.91
TRAPPC3-204ENST00000373166 CUEDC2Q9H467 287 aa20.75■□□□□ 0.91
TRAPPC3-204ENST00000373166 UBQLN1Q9UMX0 589 aaKnown RBP20.75■□□□□ 0.91
TRAPPC3-204ENST00000373166 IDEP14735 1019 aa20.74■□□□□ 0.91
TRAPPC3-204ENST00000373166 CYP3A5P20815 502 aa20.74■□□□□ 0.91
TRAPPC3-204ENST00000373166 GABRR2P28476 465 aa20.74■□□□□ 0.91
TRAPPC3-204ENST00000373166 AARSP49588 968 aaKnown RBP eCLIP20.74■□□□□ 0.91
TRAPPC3-204ENST00000373166 GTF2BQ00403 316 aa20.74■□□□□ 0.91
TRAPPC3-204ENST00000373166 MYBPC2Q14324 1141 aa20.74■□□□□ 0.91
TRAPPC3-204ENST00000373166 ZBTB6Q15916 424 aa20.74■□□□□ 0.91
TRAPPC3-204ENST00000373166 KYAT1Q16773 422 aa20.74■□□□□ 0.91
TRAPPC3-204ENST00000373166 OVOS1Q6IE37 1185 aa20.74■□□□□ 0.91
TRAPPC3-204ENST00000373166 ARMCX5Q6P1M9 558 aa20.74■□□□□ 0.91
TRAPPC3-204ENST00000373166 SHC4Q6S5L8 630 aa20.74■□□□□ 0.91
TRAPPC3-204ENST00000373166 ATAD1Q8NBU5 361 aa20.74■□□□□ 0.91
TRAPPC3-204ENST00000373166 BPIFB1Q8TDL5 484 aa20.74■□□□□ 0.91
TRAPPC3-204ENST00000373166 DHX58Q96C10 678 aa20.74■□□□□ 0.91
TRAPPC3-204ENST00000373166 HVCN1Q96D96 273 aa20.74■□□□□ 0.91
TRAPPC3-204ENST00000373166 FIZ1Q96SL8 496 aa20.74■□□□□ 0.91
TRAPPC3-204ENST00000373166 ARRDC1-AS1Q9H2J1 176 aa20.74■□□□□ 0.91
TRAPPC3-204ENST00000373166 TNMDQ9H2S6 317 aa20.74■□□□□ 0.91
TRAPPC3-204ENST00000373166 ST6GALNAC4Q9H4F1 302 aa20.74■□□□□ 0.91
TRAPPC3-204ENST00000373166 THG1LQ9NWX6 298 aaKnown RBP20.74■□□□□ 0.91
TRAPPC3-204ENST00000373166 FAM13BQ9NYF5 915 aa20.74■□□□□ 0.91
TRAPPC3-204ENST00000373166 CFAP47Q6ZTR5 3102 aa20.74■□□□□ 0.91
TRAPPC3-204ENST00000373166 CITO14578 2027 aa20.73■□□□□ 0.91
TRAPPC3-204ENST00000373166 TTC26A0AVF1 554 aa20.73■□□□□ 0.91
TRAPPC3-204ENST00000373166 MTMR11A4FU01 709 aa20.73■□□□□ 0.91
TRAPPC3-204ENST00000373166 XPOTO43592 962 aaKnown RBP20.73■□□□□ 0.91
TRAPPC3-204ENST00000373166 TYMPP19971 482 aa20.73■□□□□ 0.91
TRAPPC3-204ENST00000373166 WEE1P30291 646 aa20.73■□□□□ 0.91
TRAPPC3-204ENST00000373166 SF3A2Q15428 464 aaKnown RBP20.73■□□□□ 0.91
TRAPPC3-204ENST00000373166 CACNA2D4Q7Z3S7 1137 aa20.73■□□□□ 0.91
TRAPPC3-204ENST00000373166 IQUBQ8NA54 791 aa20.73■□□□□ 0.91
TRAPPC3-204ENST00000373166 GAB3Q8WWW8 586 aa20.73■□□□□ 0.91
TRAPPC3-204ENST00000373166 DNAJC19Q96DA6 116 aa20.73■□□□□ 0.91
TRAPPC3-204ENST00000373166 MRPL44Q9H9J2 332 aaKnown RBP20.73■□□□□ 0.91
TRAPPC3-204ENST00000373166 HSFX1Q9UBD0 423 aa20.73■□□□□ 0.91
TRAPPC3-204ENST00000373166 PCDHA7Q9UN72 937 aa20.73■□□□□ 0.91
TRAPPC3-204ENST00000373166 ATP6V1DQ9Y5K8 247 aa20.73■□□□□ 0.91
TRAPPC3-204ENST00000373166 TRIP11Q15643 1979 aa20.73■□□□□ 0.91
TRAPPC3-204ENST00000373166 MAP1BP46821 2468 aaKnown RBP20.72■□□□□ 0.91
TRAPPC3-204ENST00000373166 CCDC163A0A0D9SF12 145 aa20.72■□□□□ 0.91
TRAPPC3-204ENST00000373166 RPP40O75818 363 aaKnown RBP20.72■□□□□ 0.91
TRAPPC3-204ENST00000373166 ZNF806P0C7X5 589 aa20.72■□□□□ 0.91
TRAPPC3-204ENST00000373166 KRT85P78386 507 aa20.72■□□□□ 0.91
TRAPPC3-204ENST00000373166 PPP2R3AQ06190 1150 aa20.72■□□□□ 0.91
TRAPPC3-204ENST00000373166 TNK2Q07912 1038 aa20.72■□□□□ 0.91
TRAPPC3-204ENST00000373166 E2F4Q16254 413 aa20.72■□□□□ 0.91
TRAPPC3-204ENST00000373166 ITPRIPL2Q3MIP1 535 aa20.72■□□□□ 0.91
TRAPPC3-204ENST00000373166 ZC2HC1CQ53FD0 456 aaPredicted RBP20.72■□□□□ 0.91
TRAPPC3-204ENST00000373166 N4BP2L1Q5TBK1 243 aaPredicted RBP20.72■□□□□ 0.91
TRAPPC3-204ENST00000373166 TMEM130Q8N3G9 435 aa20.72■□□□□ 0.91
TRAPPC3-204ENST00000373166 MSTO1Q9BUK6 570 aa20.72■□□□□ 0.91
TRAPPC3-204ENST00000373166 TASP1Q9H6P5 420 aa20.72■□□□□ 0.91
TRAPPC3-204ENST00000373166 EXTL3O43909 919 aa20.71■□□□□ 0.91
TRAPPC3-204ENST00000373166 ATG13O75143 517 aa20.71■□□□□ 0.91
TRAPPC3-204ENST00000373166 PMLP29590 882 aa20.71■□□□□ 0.91
TRAPPC3-204ENST00000373166 HOXC13P31276 330 aa20.71■□□□□ 0.91
TRAPPC3-204ENST00000373166 TUFMP49411 452 aaKnown RBP20.71■□□□□ 0.91
TRAPPC3-204ENST00000373166 AMPD3Q01432 767 aa20.71■□□□□ 0.91
TRAPPC3-204ENST00000373166 VEPH1Q14D04 833 aa20.71■□□□□ 0.91
TRAPPC3-204ENST00000373166 ZNF720Q7Z2F6 126 aa20.71■□□□□ 0.91
TRAPPC3-204ENST00000373166 CCDC65Q8IXS2 484 aa20.71■□□□□ 0.91
TRAPPC3-204ENST00000373166 GCNAQ96QF7 691 aa20.71■□□□□ 0.91
TRAPPC3-204ENST00000373166 TSPAN18Q96SJ8 248 aa20.71■□□□□ 0.91
TRAPPC3-204ENST00000373166 TMEM209Q96SK2 561 aa20.71■□□□□ 0.91
TRAPPC3-204ENST00000373166 HAPLN2Q9GZV7 340 aa20.71■□□□□ 0.91
TRAPPC3-204ENST00000373166 MAGEF1Q9HAY2 307 aa20.71■□□□□ 0.91
TRAPPC3-204ENST00000373166 OLFML3Q9NRN5 406 aa20.71■□□□□ 0.91
TRAPPC3-204ENST00000373166 PANK4Q9NVE7 773 aa20.71■□□□□ 0.91
TRAPPC3-204ENST00000373166 TBC1D7Q9P0N9 293 aa20.71■□□□□ 0.91
TRAPPC3-204ENST00000373166 RCOR1Q9UKL0 485 aa20.71■□□□□ 0.91
TRAPPC3-204ENST00000373166 EXOC7Q9UPT5 735 aa20.71■□□□□ 0.91
TRAPPC3-204ENST00000373166 ZDHHC9Q9Y397 364 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms