RNA–Protein interactions for RNA: ENST00000373159.1

TRAPPC3-201, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-201ENST00000373159 LRRTM3Q86VH5 581 aa14.15□□□□□ -0.14
TRAPPC3-201ENST00000373159 METTL23Q86XA0 190 aa14.15□□□□□ -0.14
TRAPPC3-201ENST00000373159 FAM160A2Q8N612 972 aaPredicted RBP14.15□□□□□ -0.14
TRAPPC3-201ENST00000373159 SPPL2BQ8TCT7 592 aa14.15□□□□□ -0.14
TRAPPC3-201ENST00000373159 LRRC15Q8TF66 581 aa14.15□□□□□ -0.14
TRAPPC3-201ENST00000373159 DDX1Q92499 740 aaKnown RBP14.15□□□□□ -0.14
TRAPPC3-201ENST00000373159 CALML4Q96GE6 196 aa14.15□□□□□ -0.14
TRAPPC3-201ENST00000373159 LOXL4Q96JB6 756 aa14.15□□□□□ -0.14
TRAPPC3-201ENST00000373159 GCNAQ96QF7 691 aa14.15□□□□□ -0.14
TRAPPC3-201ENST00000373159 FIZ1Q96SL8 496 aa14.15□□□□□ -0.14
TRAPPC3-201ENST00000373159 CCSER1Q9C0I3 900 aa14.15□□□□□ -0.14
TRAPPC3-201ENST00000373159 GKN1Q9NS71 199 aa14.15□□□□□ -0.14
TRAPPC3-201ENST00000373159 BLOC1S4Q9NUP1 217 aa14.15□□□□□ -0.14
TRAPPC3-201ENST00000373159 STYXL1Q9Y6J8 313 aa14.15□□□□□ -0.14
TRAPPC3-201ENST00000373159 PDCD11Q14690 1871 aaKnown RBP14.14□□□□□ -0.15
TRAPPC3-201ENST00000373159 SOBPA7XYQ1 873 aa14.14□□□□□ -0.15
TRAPPC3-201ENST00000373159 ANKRD63C9JTQ0 380 aa14.14□□□□□ -0.15
TRAPPC3-201ENST00000373159 TRDMT1O14717 391 aaKnown RBP14.14□□□□□ -0.15
TRAPPC3-201ENST00000373159 EXTL3O43909 919 aa14.14□□□□□ -0.15
TRAPPC3-201ENST00000373159 HAPLN1P10915 354 aaPredicted RBP14.14□□□□□ -0.15
TRAPPC3-201ENST00000373159 ACOT2P49753 483 aa14.14□□□□□ -0.15
TRAPPC3-201ENST00000373159 TAF12Q16514 161 aa14.14□□□□□ -0.15
TRAPPC3-201ENST00000373159 TMEM196Q5HYL7 178 aa14.14□□□□□ -0.15
TRAPPC3-201ENST00000373159 SLFN12LQ6IEE8 588 aa14.14□□□□□ -0.15
TRAPPC3-201ENST00000373159 CMTM8Q8IZV2 173 aa14.14□□□□□ -0.15
TRAPPC3-201ENST00000373159 ATG13O75143 517 aa14.13□□□□□ -0.15
TRAPPC3-201ENST00000373159 F11P03951 625 aa14.13□□□□□ -0.15
TRAPPC3-201ENST00000373159 HMGA1P17096 107 aaKnown RBP14.13□□□□□ -0.15
TRAPPC3-201ENST00000373159 NMT1P30419 496 aaKnown RBP14.13□□□□□ -0.15
TRAPPC3-201ENST00000373159 HOXC13P31276 330 aa14.13□□□□□ -0.15
TRAPPC3-201ENST00000373159 TAF6P49848 677 aa14.13□□□□□ -0.15
TRAPPC3-201ENST00000373159 LIMK1P53667 647 aa14.13□□□□□ -0.15
TRAPPC3-201ENST00000373159 GRSF1Q12849 480 aaKnown RBP eCLIP14.13□□□□□ -0.15
TRAPPC3-201ENST00000373159 RUNX3Q13761 415 aa14.13□□□□□ -0.15
TRAPPC3-201ENST00000373159 DHX8Q14562 1220 aaKnown RBP14.13□□□□□ -0.15
TRAPPC3-201ENST00000373159 MCM6Q14566 821 aa14.13□□□□□ -0.15
TRAPPC3-201ENST00000373159 WSCD1Q658N2 575 aa14.13□□□□□ -0.15
TRAPPC3-201ENST00000373159 ADALQ6DHV7 355 aa14.13□□□□□ -0.15
TRAPPC3-201ENST00000373159 CACNA2D4Q7Z3S7 1137 aa14.13□□□□□ -0.15
TRAPPC3-201ENST00000373159 TMEM150AQ86TG1 271 aa14.13□□□□□ -0.15
TRAPPC3-201ENST00000373159 DCP1BQ8IZD4 617 aaKnown RBP14.13□□□□□ -0.15
TRAPPC3-201ENST00000373159 GIPC2Q8TF65 315 aa14.13□□□□□ -0.15
TRAPPC3-201ENST00000373159 GAB3Q8WWW8 586 aa14.13□□□□□ -0.15
TRAPPC3-201ENST00000373159 RAD54LQ92698 747 aa14.13□□□□□ -0.15
TRAPPC3-201ENST00000373159 PYM1Q9BRP8 204 aaKnown RBP14.13□□□□□ -0.15
TRAPPC3-201ENST00000373159 SMG9Q9H0W8 520 aaKnown RBP14.13□□□□□ -0.15
TRAPPC3-201ENST00000373159 ST6GALNAC4Q9H4F1 302 aa14.13□□□□□ -0.15
TRAPPC3-201ENST00000373159 DPP3Q9NY33 737 aa14.13□□□□□ -0.15
TRAPPC3-201ENST00000373159 KPNA7A9QM74 516 aa14.12□□□□□ -0.15
TRAPPC3-201ENST00000373159 H3BQV1 296 aa14.12□□□□□ -0.15
TRAPPC3-201ENST00000373159 AXIN1O15169 862 aa14.12□□□□□ -0.15
TRAPPC3-201ENST00000373159 KRT18P05783 430 aaKnown RBP14.12□□□□□ -0.15
TRAPPC3-201ENST00000373159 ZNF806P0C7X5 589 aa14.12□□□□□ -0.15
TRAPPC3-201ENST00000373159 DDX6P26196 483 aaKnown RBP eCLIP14.12□□□□□ -0.15
TRAPPC3-201ENST00000373159 AVPR1AP37288 418 aa14.12□□□□□ -0.15
TRAPPC3-201ENST00000373159 RAP1GAPP47736 663 aa14.12□□□□□ -0.15
TRAPPC3-201ENST00000373159 NLRP12P59046 1061 aa14.12□□□□□ -0.15
TRAPPC3-201ENST00000373159 AMPD2Q01433 879 aa14.12□□□□□ -0.15
TRAPPC3-201ENST00000373159 ZC2HC1CQ53FD0 456 aaPredicted RBP14.12□□□□□ -0.15
TRAPPC3-201ENST00000373159 FSTL4Q6MZW2 842 aa14.12□□□□□ -0.15
TRAPPC3-201ENST00000373159 PKN3Q6P5Z2 889 aa14.12□□□□□ -0.15
TRAPPC3-201ENST00000373159 NT5DC4Q86YG4 428 aa14.12□□□□□ -0.15
TRAPPC3-201ENST00000373159 USP13Q92995 863 aaPredicted RBP14.12□□□□□ -0.15
TRAPPC3-201ENST00000373159 ZHX3Q9H4I2 956 aa14.12□□□□□ -0.15
TRAPPC3-201ENST00000373159 HPS4Q9NQG7 708 aa14.12□□□□□ -0.15
TRAPPC3-201ENST00000373159 TDP1Q9NUW8 608 aa14.12□□□□□ -0.15
TRAPPC3-201ENST00000373159 AGO2Q9UKV8 859 aaKnown RBP14.12□□□□□ -0.15
TRAPPC3-201ENST00000373159 CCL26Q9Y258 94 aa14.12□□□□□ -0.15
TRAPPC3-201ENST00000373159 PCDHB5Q9Y5E4 795 aa14.12□□□□□ -0.15
TRAPPC3-201ENST00000373159 MYH11P35749 1972 aa14.11□□□□□ -0.15
TRAPPC3-201ENST00000373159 OTOL1A6NHN0 477 aaPredicted RBP14.11□□□□□ -0.15
TRAPPC3-201ENST00000373159 TM4SF5O14894 197 aa14.11□□□□□ -0.15
TRAPPC3-201ENST00000373159 TBCAO75347 108 aaKnown RBP14.11□□□□□ -0.15
TRAPPC3-201ENST00000373159 RPP40O75818 363 aaKnown RBP14.11□□□□□ -0.15
TRAPPC3-201ENST00000373159 AKAP3O75969 853 aa14.11□□□□□ -0.15
TRAPPC3-201ENST00000373159 BMP15O95972 392 aa14.11□□□□□ -0.15
TRAPPC3-201ENST00000373159 PLCG1P19174 1290 aa14.11□□□□□ -0.15
TRAPPC3-201ENST00000373159 DDIT3P35638 169 aa14.11□□□□□ -0.15
TRAPPC3-201ENST00000373159 LONP1P36776 959 aaKnown RBP14.11□□□□□ -0.15
TRAPPC3-201ENST00000373159 CDR1P51861 262 aa14.11□□□□□ -0.15
TRAPPC3-201ENST00000373159 BFSP1Q12934 665 aa14.11□□□□□ -0.15
TRAPPC3-201ENST00000373159 POSTNQ15063 836 aa14.11□□□□□ -0.15
TRAPPC3-201ENST00000373159 IL31Q6EBC2 164 aa14.11□□□□□ -0.15
TRAPPC3-201ENST00000373159 CRELD2Q6UXH1 353 aaPredicted RBP14.11□□□□□ -0.15
TRAPPC3-201ENST00000373159 ZNF720Q7Z2F6 126 aa14.11□□□□□ -0.15
TRAPPC3-201ENST00000373159 MON1AQ86VX9 555 aa14.11□□□□□ -0.15
TRAPPC3-201ENST00000373159 CAMKK1Q8N5S9 505 aa14.11□□□□□ -0.15
TRAPPC3-201ENST00000373159 MAB21L3Q8N8X9 362 aa14.11□□□□□ -0.15
TRAPPC3-201ENST00000373159 CHFRQ96EP1 664 aa14.11□□□□□ -0.15
TRAPPC3-201ENST00000373159 ZC3H10Q96K80 434 aaKnown RBP14.11□□□□□ -0.15
TRAPPC3-201ENST00000373159 ARRDC1-AS1Q9H2J1 176 aa14.11□□□□□ -0.15
TRAPPC3-201ENST00000373159 EBF3Q9H4W6 596 aa14.11□□□□□ -0.15
TRAPPC3-201ENST00000373159 KIF9Q9HAQ2 790 aa14.11□□□□□ -0.15
TRAPPC3-201ENST00000373159 ABI2Q9NYB9 513 aaPredicted RBP14.11□□□□□ -0.15
TRAPPC3-201ENST00000373159 SLC8A2Q9UPR5 921 aa14.11□□□□□ -0.15
TRAPPC3-201ENST00000373159 CEP295Q9C0D2 2601 aa14.11□□□□□ -0.15
TRAPPC3-201ENST00000373159 USP24Q9UPU5 2620 aa14.1□□□□□ -0.15
TRAPPC3-201ENST00000373159 TISP43B9A030 160 aa14.1□□□□□ -0.15
TRAPPC3-201ENST00000373159 EPN2O95208 641 aa14.1□□□□□ -0.15
TRAPPC3-201ENST00000373159 IL18RAPO95256 599 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms