RNA–Protein interactions for RNA: ENST00000372237.7

TMEM53-202, Transcript of transmembrane protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM53, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-202ENST00000372237 TRABDQ9H4I3 376 aa20.19■□□□□ 0.82
TMEM53-202ENST00000372237 ARHGEF3Q9NR81 526 aa20.19■□□□□ 0.82
TMEM53-202ENST00000372237 ADAMTS5Q9UNA0 930 aa20.19■□□□□ 0.82
TMEM53-202ENST00000372237 DOCK1Q14185 1865 aa20.18■□□□□ 0.82
TMEM53-202ENST00000372237 hCG_1818297A0A087WSY0 165 aa20.18■□□□□ 0.82
TMEM53-202ENST00000372237 A0A1B0GUA9 196 aa20.18■□□□□ 0.82
TMEM53-202ENST00000372237 SGK1O00141 431 aa20.18■□□□□ 0.82
TMEM53-202ENST00000372237 ATP2A1O14983 1001 aa20.18■□□□□ 0.82
TMEM53-202ENST00000372237 LSM8O95777 96 aaKnown RBP20.18■□□□□ 0.82
TMEM53-202ENST00000372237 ASS1P00966 412 aaKnown RBP20.18■□□□□ 0.82
TMEM53-202ENST00000372237 IFNB1P01574 187 aa20.18■□□□□ 0.82
TMEM53-202ENST00000372237 KRT16P08779 473 aa20.18■□□□□ 0.82
TMEM53-202ENST00000372237 VCPP55072 806 aaKnown RBP20.18■□□□□ 0.82
TMEM53-202ENST00000372237 OGDHQ02218 1023 aa20.18■□□□□ 0.82
TMEM53-202ENST00000372237 SPARCL1Q14515 664 aa20.18■□□□□ 0.82
TMEM53-202ENST00000372237 PKN2Q16513 984 aaKnown RBP20.18■□□□□ 0.82
TMEM53-202ENST00000372237 ECHDC2Q86YB7 292 aa20.18■□□□□ 0.82
TMEM53-202ENST00000372237 UBR7Q8N806 425 aa20.18■□□□□ 0.82
TMEM53-202ENST00000372237 TMEM35BQ8NCS4 154 aa20.18■□□□□ 0.82
TMEM53-202ENST00000372237 TMEM121Q9BTD3 319 aa20.18■□□□□ 0.82
TMEM53-202ENST00000372237 KIF9Q9HAQ2 790 aa20.18■□□□□ 0.82
TMEM53-202ENST00000372237 PICK1Q9NRD5 415 aa20.18■□□□□ 0.82
TMEM53-202ENST00000372237 STK38LQ9Y2H1 464 aa20.18■□□□□ 0.82
TMEM53-202ENST00000372237 PRPF4O43172 522 aaKnown RBP eCLIP20.18■□□□□ 0.82
TMEM53-202ENST00000372237 ATG7O95352 703 aa20.18■□□□□ 0.82
TMEM53-202ENST00000372237 TNFSF9P41273 254 aa20.18■□□□□ 0.82
TMEM53-202ENST00000372237 DNAJC3Q13217 504 aa20.18■□□□□ 0.82
TMEM53-202ENST00000372237 PIGHQ14442 188 aaPredicted RBP20.18■□□□□ 0.82
TMEM53-202ENST00000372237 OASLQ15646 514 aaKnown RBP20.18■□□□□ 0.82
TMEM53-202ENST00000372237 WDR72Q3MJ13 1102 aa20.18■□□□□ 0.82
TMEM53-202ENST00000372237 RNASEH2BQ5TBB1 312 aaKnown RBP20.18■□□□□ 0.82
TMEM53-202ENST00000372237 CENPUQ71F23 418 aa20.18■□□□□ 0.82
TMEM53-202ENST00000372237 TMEM134Q9H6X4 195 aa20.18■□□□□ 0.82
TMEM53-202ENST00000372237 DDX56Q9NY93 547 aaKnown RBP20.18■□□□□ 0.82
TMEM53-202ENST00000372237 SENP1Q9P0U3 644 aa20.18■□□□□ 0.82
TMEM53-202ENST00000372237 TCRBV5S1A1TA0A578 114 aa20.17■□□□□ 0.82
TMEM53-202ENST00000372237 PTPRAP18433 802 aa20.17■□□□□ 0.82
TMEM53-202ENST00000372237 STXBP2Q15833 593 aa20.17■□□□□ 0.82
TMEM53-202ENST00000372237 ASRGL1Q7L266 308 aa20.17■□□□□ 0.82
TMEM53-202ENST00000372237 BRSK2Q8IWQ3 736 aa20.17■□□□□ 0.82
TMEM53-202ENST00000372237 C4orf33Q8N1A6 199 aa20.17■□□□□ 0.82
TMEM53-202ENST00000372237 FBF1Q8TES7 1133 aa20.17■□□□□ 0.82
TMEM53-202ENST00000372237 AGAP11Q8TF27 550 aa20.17■□□□□ 0.82
TMEM53-202ENST00000372237 N4BP2L2Q92802 583 aaPredicted RBP20.17■□□□□ 0.82
TMEM53-202ENST00000372237 MRRFQ96E11 262 aaKnown RBP20.17■□□□□ 0.82
TMEM53-202ENST00000372237 TCHPQ9BT92 498 aa20.17■□□□□ 0.82
TMEM53-202ENST00000372237 PHTF1Q9UMS5 762 aa20.17■□□□□ 0.82
TMEM53-202ENST00000372237 SMG5Q9UPR3 1016 aaKnown RBP20.17■□□□□ 0.82
TMEM53-202ENST00000372237 L3MBTL1Q9Y468 752 aa20.17■□□□□ 0.82
TMEM53-202ENST00000372237 ITGAVP06756 1048 aa20.16■□□□□ 0.82
TMEM53-202ENST00000372237 ALADP13716 330 aa20.16■□□□□ 0.82
TMEM53-202ENST00000372237 ELF1P32519 619 aa20.16■□□□□ 0.82
TMEM53-202ENST00000372237 PTPN7P35236 360 aa20.16■□□□□ 0.82
TMEM53-202ENST00000372237 AP3M2P53677 418 aa20.16■□□□□ 0.82
TMEM53-202ENST00000372237 CCDC15Q0P6D6 951 aa20.16■□□□□ 0.82
TMEM53-202ENST00000372237 PDIA2Q13087 525 aaKnown RBP20.16■□□□□ 0.82
TMEM53-202ENST00000372237 CAPSQ13938 189 aa20.16■□□□□ 0.82
TMEM53-202ENST00000372237 DCAF15Q66K64 600 aa20.16■□□□□ 0.82
TMEM53-202ENST00000372237 GPAT2Q6NUI2 795 aa20.16■□□□□ 0.82
TMEM53-202ENST00000372237 WDR49Q8IV35 697 aa20.16■□□□□ 0.82
TMEM53-202ENST00000372237 DENND1AQ8TEH3 1009 aa20.16■□□□□ 0.82
TMEM53-202ENST00000372237 WRNIP1Q96S55 665 aa20.16■□□□□ 0.82
TMEM53-202ENST00000372237 MTMR12Q9C0I1 747 aa20.16■□□□□ 0.82
TMEM53-202ENST00000372237 CISHQ9NSE2 258 aa20.16■□□□□ 0.82
TMEM53-202ENST00000372237 TRIM33Q9UPN9 1127 aa20.16■□□□□ 0.82
TMEM53-202ENST00000372237 SHOC2Q9UQ13 582 aa20.16■□□□□ 0.82
TMEM53-202ENST00000372237 STARD13Q9Y3M8 1113 aa20.16■□□□□ 0.82
TMEM53-202ENST00000372237 NDC80O14777 642 aa20.16■□□□□ 0.82
TMEM53-202ENST00000372237 ALOX15BO15296 676 aa20.16■□□□□ 0.82
TMEM53-202ENST00000372237 CDKN2BP42772 138 aa20.16■□□□□ 0.82
TMEM53-202ENST00000372237 MYL6P60660 151 aa20.16■□□□□ 0.82
TMEM53-202ENST00000372237 TAP1Q03518 808 aa20.16■□□□□ 0.82
TMEM53-202ENST00000372237 ZBTB33Q86T24 672 aa20.16■□□□□ 0.82
TMEM53-202ENST00000372237 ERICH1Q86X53 443 aa20.16■□□□□ 0.82
TMEM53-202ENST00000372237 NKD2Q969F2 451 aaPredicted RBP20.16■□□□□ 0.82
TMEM53-202ENST00000372237 STAMBPL1Q96FJ0 436 aa20.16■□□□□ 0.82
TMEM53-202ENST00000372237 THOC1Q96FV9 657 aaKnown RBP20.16■□□□□ 0.82
TMEM53-202ENST00000372237 NIFKQ9BYG3 293 aaKnown RBP20.16■□□□□ 0.82
TMEM53-202ENST00000372237 PCDH9Q9HC56 1237 aa20.16■□□□□ 0.82
TMEM53-202ENST00000372237 SRCAPQ6ZRS2 3230 aa20.16■□□□□ 0.82
TMEM53-202ENST00000372237 MAGEB2O15479 319 aa20.15■□□□□ 0.82
TMEM53-202ENST00000372237 ADCY3O60266 1144 aa20.15■□□□□ 0.82
TMEM53-202ENST00000372237 UNC5CO95185 931 aa20.15■□□□□ 0.82
TMEM53-202ENST00000372237 CCNB1P14635 433 aa20.15■□□□□ 0.82
TMEM53-202ENST00000372237 CA4P22748 312 aa20.15■□□□□ 0.82
TMEM53-202ENST00000372237 SKIV2L2P42285 1042 aaKnown RBP20.15■□□□□ 0.82
TMEM53-202ENST00000372237 MSH2P43246 934 aa20.15■□□□□ 0.82
TMEM53-202ENST00000372237 SLC18A1P54219 525 aa20.15■□□□□ 0.82
TMEM53-202ENST00000372237 CYP4A22Q5TCH4 519 aa20.15■□□□□ 0.82
TMEM53-202ENST00000372237 ANKLE1Q8NAG6 615 aa20.15■□□□□ 0.82
TMEM53-202ENST00000372237 SPOCK2Q92563 424 aa20.15■□□□□ 0.82
TMEM53-202ENST00000372237 PRCCQ92733 491 aaPredicted RBP20.15■□□□□ 0.82
TMEM53-202ENST00000372237 ZNF518BQ9C0D4 1074 aa20.15■□□□□ 0.82
TMEM53-202ENST00000372237 AGTPBP1Q9UPW5 1226 aa20.15■□□□□ 0.82
TMEM53-202ENST00000372237 CEP83Q9Y592 693 aa20.15■□□□□ 0.82
TMEM53-202ENST00000372237 TTLL13PA6NNM8 815 aa20.15■□□□□ 0.82
TMEM53-202ENST00000372237 GOLGA8SH3BPF8 625 aa20.15■□□□□ 0.82
TMEM53-202ENST00000372237 GOLGA8MH3BSY2 632 aa20.15■□□□□ 0.82
TMEM53-202ENST00000372237 RPA3P35244 121 aaPredicted RBP20.15■□□□□ 0.82
TMEM53-202ENST00000372237 SETDB1Q15047 1291 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms