RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 APOBEC2Q9Y235 224 aaKnown RBP10.24□□□□□ -0.77
COL4A6-202ENST00000372216 BCL9O00512 1426 aa10.24□□□□□ -0.77
COL4A6-202ENST00000372216 MED24O75448 989 aa10.24□□□□□ -0.77
COL4A6-202ENST00000372216 SUPT3HO75486 399 aa10.24□□□□□ -0.77
COL4A6-202ENST00000372216 ACADMP11310 421 aa10.24□□□□□ -0.77
COL4A6-202ENST00000372216 DSG3P32926 999 aa10.24□□□□□ -0.77
COL4A6-202ENST00000372216 CYP2C19P33261 490 aa10.24□□□□□ -0.77
COL4A6-202ENST00000372216 MTM1Q13496 603 aa10.24□□□□□ -0.77
COL4A6-202ENST00000372216 TRIML2Q8N7C3 387 aa10.24□□□□□ -0.77
COL4A6-202ENST00000372216 TMEM169Q96HH4 297 aa10.24□□□□□ -0.77
COL4A6-202ENST00000372216 TRIM55Q9BYV6 548 aa10.24□□□□□ -0.77
COL4A6-202ENST00000372216 IL25Q9H293 177 aa10.24□□□□□ -0.77
COL4A6-202ENST00000372216 PCDHGB4Q9UN71 923 aa10.24□□□□□ -0.77
COL4A6-202ENST00000372216 AURKCQ9UQB9 309 aa10.24□□□□□ -0.77
COL4A6-202ENST00000372216 KRT87PA6NCN2 255 aa10.24□□□□□ -0.77
COL4A6-202ENST00000372216 GOLGA8RI6L899 631 aa10.24□□□□□ -0.77
COL4A6-202ENST00000372216 EFCAB14O75071 495 aa10.24□□□□□ -0.77
COL4A6-202ENST00000372216 GUCA1CO95843 209 aa10.24□□□□□ -0.77
COL4A6-202ENST00000372216 GFAPP14136 432 aa10.24□□□□□ -0.77
COL4A6-202ENST00000372216 SLC9A1P19634 815 aa10.24□□□□□ -0.77
COL4A6-202ENST00000372216 GALCP54803 685 aa10.24□□□□□ -0.77
COL4A6-202ENST00000372216 PLIN5Q00G26 463 aa10.24□□□□□ -0.77
COL4A6-202ENST00000372216 LY6KQ17RY6 165 aa10.24□□□□□ -0.77
COL4A6-202ENST00000372216 USP49Q70CQ1 688 aa10.24□□□□□ -0.77
COL4A6-202ENST00000372216 ADGRB1O14514 1584 aa10.24□□□□□ -0.77
COL4A6-202ENST00000372216 VWDEQ8N2E2 1590 aa10.24□□□□□ -0.77
COL4A6-202ENST00000372216 WBP4O75554 376 aaKnown RBP10.24□□□□□ -0.77
COL4A6-202ENST00000372216 SREBF1P36956 1147 aa10.24□□□□□ -0.77
COL4A6-202ENST00000372216 HERVK_113P62684 666 aa10.24□□□□□ -0.77
COL4A6-202ENST00000372216 ALDH6A1Q02252 535 aaKnown RBP10.24□□□□□ -0.77
COL4A6-202ENST00000372216 SLC18A3Q16572 532 aa10.24□□□□□ -0.77
COL4A6-202ENST00000372216 Q4G0T1 1027 aa10.24□□□□□ -0.77
COL4A6-202ENST00000372216 MIER2Q8N344 545 aa10.24□□□□□ -0.77
COL4A6-202ENST00000372216 TBC1D19Q8N5T2 526 aa10.24□□□□□ -0.77
COL4A6-202ENST00000372216 SLITRK1Q96PX8 696 aa10.24□□□□□ -0.77
COL4A6-202ENST00000372216 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.24□□□□□ -0.77
COL4A6-202ENST00000372216 A0A1B0GTH6 734 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 H0Y626 953 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 NKRFO15226 690 aaKnown RBP eCLIP10.23□□□□□ -0.77
COL4A6-202ENST00000372216 ATMINO43313 823 aaPredicted RBP10.23□□□□□ -0.77
COL4A6-202ENST00000372216 ZC3H11AO75152 810 aaKnown RBP eCLIP10.23□□□□□ -0.77
COL4A6-202ENST00000372216 NAMPTP43490 491 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 GRB10Q13322 594 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 MTF1Q14872 753 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 ZRANB3Q5FWF4 1079 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 EFHC1Q5JVL4 640 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 GJB7Q6PEY0 223 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 FAM83AQ86UY5 434 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 SPACA7Q96KW9 195 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 FOPNLQ96NB1 174 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 FAM118BQ9BPY3 351 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 C17orf75Q9HAS0 396 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 DMAP1Q9NPF5 467 aaPredicted RBP10.23□□□□□ -0.77
COL4A6-202ENST00000372216 GEMIN8Q9NWZ8 242 aaKnown RBP10.23□□□□□ -0.77
COL4A6-202ENST00000372216 FZD1Q9UP38 647 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 ORC1Q13415 861 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 DHX34Q14147 1143 aaKnown RBP10.23□□□□□ -0.77
COL4A6-202ENST00000372216 PLCL1Q15111 1095 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 FSCBQ5H9T9 825 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 MPZL3Q6UWV2 235 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 CHSY1Q86X52 802 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 CEP70Q8NHQ1 597 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 VPS33BQ9H267 617 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 KCNQ5Q9NR82 932 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 CD274Q9NZQ7 290 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 SALL1Q9NSC2 1324 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 USP27XA6NNY8 438 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 TROAPQ12815 778 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 ERAP2Q6P179 960 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 TBC1D1Q86TI0 1168 aaPredicted RBP10.23□□□□□ -0.77
COL4A6-202ENST00000372216 ASPSCR1Q9BZE9 553 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 DTNAQ9Y4J8 743 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 HOXA2O43364 376 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 EPC2Q52LR7 807 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 SAMD3Q8N6K7 520 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 FAM136AQ96C01 138 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 FAM161BQ96MY7 647 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 ELAC2Q9BQ52 826 aaKnown RBP10.23□□□□□ -0.77
COL4A6-202ENST00000372216 KDM4CQ9H3R0 1056 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 N6AMT1Q9Y5N5 214 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 WNT10BO00744 389 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 DARSP14868 501 aaKnown RBP10.23□□□□□ -0.77
COL4A6-202ENST00000372216 KLRC1P26715 233 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 TYK2P29597 1187 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 NCALDP61601 193 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 P3H1Q32P28 736 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 USP50Q70EL3 339 aaPredicted RBP10.23□□□□□ -0.77
COL4A6-202ENST00000372216 CARNMT1Q8N4J0 409 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 ATL2Q8NHH9 583 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 PHF21AQ96BD5 680 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 HES6Q96HZ4 224 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 LATS2Q9NRM7 1088 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 AGPAT5Q9NUQ2 364 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 MKL2Q9ULH7 1088 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 SLIT1O75093 1534 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 KPNA6O60684 536 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 ALDH1A2O94788 518 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 SLC8A1P32418 973 aa10.23□□□□□ -0.77
COL4A6-202ENST00000372216 KPNA1P52294 538 aaPredicted RBP10.23□□□□□ -0.77
COL4A6-202ENST00000372216 MORF4L2Q15014 288 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms