RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 CLTAP09496 248 aa14.98□□□□□ -0.01
LDB3-204ENST00000372066 UNGP13051 313 aaPredicted RBP14.98□□□□□ -0.01
LDB3-204ENST00000372066 GBP1P32455 592 aa14.98□□□□□ -0.01
LDB3-204ENST00000372066 CTNNA1P35221 906 aaKnown RBP14.98□□□□□ -0.01
LDB3-204ENST00000372066 GGCXP38435 758 aa14.98□□□□□ -0.01
LDB3-204ENST00000372066 MCL1Q07820 350 aa14.98□□□□□ -0.01
LDB3-204ENST00000372066 PLCB4Q15147 1175 aa14.98□□□□□ -0.01
LDB3-204ENST00000372066 DCAF12L1Q5VU92 463 aa14.98□□□□□ -0.01
LDB3-204ENST00000372066 CD302Q8IX05 232 aa14.98□□□□□ -0.01
LDB3-204ENST00000372066 C1orf131Q8NDD1 294 aaKnown RBP14.98□□□□□ -0.01
LDB3-204ENST00000372066 PRPF31Q8WWY3 499 aaKnown RBP14.98□□□□□ -0.01
LDB3-204ENST00000372066 CD101Q93033 1021 aa14.98□□□□□ -0.01
LDB3-204ENST00000372066 VCPIP1Q96JH7 1222 aa14.98□□□□□ -0.01
LDB3-204ENST00000372066 AP1M1Q9BXS5 423 aa14.98□□□□□ -0.01
LDB3-204ENST00000372066 HAPLN2Q9GZV7 340 aa14.98□□□□□ -0.01
LDB3-204ENST00000372066 LCMT1Q9UIC8 334 aa14.98□□□□□ -0.01
LDB3-204ENST00000372066 RASAL2Q9UJF2 1139 aa14.98□□□□□ -0.01
LDB3-204ENST00000372066 TRPC6Q9Y210 931 aa14.98□□□□□ -0.01
LDB3-204ENST00000372066 UTP11Q9Y3A2 253 aaKnown RBP14.98□□□□□ -0.01
LDB3-204ENST00000372066 INSL6Q9Y581 213 aa14.98□□□□□ -0.01
LDB3-204ENST00000372066 AGPSO00116 658 aa14.97□□□□□ -0.01
LDB3-204ENST00000372066 TREHO43280 583 aa14.97□□□□□ -0.01
LDB3-204ENST00000372066 VNN1O95497 513 aa14.97□□□□□ -0.01
LDB3-204ENST00000372066 CYP1A1P04798 512 aaPredicted RBP14.97□□□□□ -0.01
LDB3-204ENST00000372066 LGALS2P05162 132 aa14.97□□□□□ -0.01
LDB3-204ENST00000372066 SMIM10L2AP0DMW4 78 aa14.97□□□□□ -0.01
LDB3-204ENST00000372066 SMIM10L2BP0DMW5 78 aa14.97□□□□□ -0.01
LDB3-204ENST00000372066 COMTP21964 271 aa14.97□□□□□ -0.01
LDB3-204ENST00000372066 HSPA9P38646 679 aaKnown RBP14.97□□□□□ -0.01
LDB3-204ENST00000372066 SLC1A1P43005 524 aa14.97□□□□□ -0.01
LDB3-204ENST00000372066 POU5F1Q01860 360 aaKnown RBP14.97□□□□□ -0.01
LDB3-204ENST00000372066 CENPCQ03188 943 aa14.97□□□□□ -0.01
LDB3-204ENST00000372066 POU5F1BQ06416 359 aa14.97□□□□□ -0.01
LDB3-204ENST00000372066 LAMTOR4Q0VGL1 99 aa14.97□□□□□ -0.01
LDB3-204ENST00000372066 MESDQ14696 234 aa14.97□□□□□ -0.01
LDB3-204ENST00000372066 IFT81Q8WYA0 676 aa14.97□□□□□ -0.01
LDB3-204ENST00000372066 ACO2Q99798 780 aaKnown RBP14.97□□□□□ -0.01
LDB3-204ENST00000372066 NFKBIZQ9BYH8 718 aa14.97□□□□□ -0.01
LDB3-204ENST00000372066 RNPEPQ9H4A4 650 aa14.97□□□□□ -0.01
LDB3-204ENST00000372066 CNOT8Q9UFF9 292 aaKnown RBP14.97□□□□□ -0.01
LDB3-204ENST00000372066 NCOR1O75376 2440 aa14.96□□□□□ -0.01
LDB3-204ENST00000372066 COL1A2P08123 1366 aa14.96□□□□□ -0.01
LDB3-204ENST00000372066 SPOPO43791 374 aa14.96□□□□□ -0.01
LDB3-204ENST00000372066 PHF2O75151 1096 aa14.96□□□□□ -0.01
LDB3-204ENST00000372066 PHACTR2O75167 634 aa14.96□□□□□ -0.01
LDB3-204ENST00000372066 ACO1P21399 889 aaKnown RBP14.96□□□□□ -0.01
LDB3-204ENST00000372066 CHRNA3P32297 505 aa14.96□□□□□ -0.01
LDB3-204ENST00000372066 NOP14P78316 857 aaKnown RBP14.96□□□□□ -0.01
LDB3-204ENST00000372066 MTMR3Q13615 1198 aa14.96□□□□□ -0.01
LDB3-204ENST00000372066 NCOA4Q13772 614 aa14.96□□□□□ -0.01
LDB3-204ENST00000372066 ZNF484Q5JVG2 852 aa14.96□□□□□ -0.01
LDB3-204ENST00000372066 SPDYCQ5MJ68 293 aa14.96□□□□□ -0.01
LDB3-204ENST00000372066 CFAP58Q5T655 872 aa14.96□□□□□ -0.01
LDB3-204ENST00000372066 LIN9Q5TKA1 542 aa14.96□□□□□ -0.01
LDB3-204ENST00000372066 MCOLN2Q8IZK6 566 aa14.96□□□□□ -0.01
LDB3-204ENST00000372066 MAIP1Q8WWC4 291 aa14.96□□□□□ -0.01
LDB3-204ENST00000372066 SEPT8Q92599 483 aa14.96□□□□□ -0.01
LDB3-204ENST00000372066 ALG3Q92685 438 aa14.96□□□□□ -0.01
LDB3-204ENST00000372066 FAXDC2Q96IV6 333 aa14.96□□□□□ -0.01
LDB3-204ENST00000372066 ZBTB45Q96K62 511 aaPredicted RBP14.96□□□□□ -0.01
LDB3-204ENST00000372066 PI4K2AQ9BTU6 479 aa14.96□□□□□ -0.01
LDB3-204ENST00000372066 FAM129AQ9BZQ8 928 aa14.96□□□□□ -0.01
LDB3-204ENST00000372066 DDX47Q9H0S4 455 aaKnown RBP14.96□□□□□ -0.01
LDB3-204ENST00000372066 EPHX3Q9H6B9 360 aa14.96□□□□□ -0.01
LDB3-204ENST00000372066 PCDHA3Q9Y5H8 950 aa14.96□□□□□ -0.01
LDB3-204ENST00000372066 EVPLQ92817 2033 aa14.96□□□□□ -0.01
LDB3-204ENST00000372066 XIRP2A4UGR9 3374 aa14.96□□□□□ -0.01
LDB3-204ENST00000372066 A6NNZ2 444 aa14.95□□□□□ -0.02
LDB3-204ENST00000372066 ZBTB42B2RXF5 422 aa14.95□□□□□ -0.02
LDB3-204ENST00000372066 ACKR2O00590 384 aa14.95□□□□□ -0.02
LDB3-204ENST00000372066 FAM189A1O60320 539 aa14.95□□□□□ -0.02
LDB3-204ENST00000372066 GNAT1P11488 350 aa14.95□□□□□ -0.02
LDB3-204ENST00000372066 PROZP22891 400 aa14.95□□□□□ -0.02
LDB3-204ENST00000372066 NSFP46459 744 aaKnown RBP14.95□□□□□ -0.02
LDB3-204ENST00000372066 PEX5P50542 639 aa14.95□□□□□ -0.02
LDB3-204ENST00000372066 DRG2P55039 364 aaKnown RBP14.95□□□□□ -0.02
LDB3-204ENST00000372066 YWHAEP62258 255 aaKnown RBP14.95□□□□□ -0.02
LDB3-204ENST00000372066 HLTFQ14527 1009 aaKnown RBP eCLIP14.95□□□□□ -0.02
LDB3-204ENST00000372066 PTPROQ16827 1216 aa14.95□□□□□ -0.02
LDB3-204ENST00000372066 TUBB8Q3ZCM7 444 aa14.95□□□□□ -0.02
LDB3-204ENST00000372066 PLEKHG4Q58EX7 1191 aa14.95□□□□□ -0.02
LDB3-204ENST00000372066 MPZL3Q6UWV2 235 aa14.95□□□□□ -0.02
LDB3-204ENST00000372066 LRIG3Q6UXM1 1119 aa14.95□□□□□ -0.02
LDB3-204ENST00000372066 RNF149Q8NC42 400 aa14.95□□□□□ -0.02
LDB3-204ENST00000372066 TSEN2Q8NCE0 465 aaKnown RBP14.95□□□□□ -0.02
LDB3-204ENST00000372066 FBXO22Q8NEZ5 403 aa14.95□□□□□ -0.02
LDB3-204ENST00000372066 GDAP1L1Q96MZ0 367 aa14.95□□□□□ -0.02
LDB3-204ENST00000372066 C17orf80Q9BSJ5 609 aa14.95□□□□□ -0.02
LDB3-204ENST00000372066 FAM204AQ9H8W3 233 aa14.95□□□□□ -0.02
LDB3-204ENST00000372066 SETD4Q9NVD3 440 aa14.95□□□□□ -0.02
LDB3-204ENST00000372066 ERAP1Q9NZ08 941 aa14.95□□□□□ -0.02
LDB3-204ENST00000372066 CPSF3Q9UKF6 684 aaKnown RBP14.95□□□□□ -0.02
LDB3-204ENST00000372066 SCINQ9Y6U3 715 aa14.95□□□□□ -0.02
LDB3-204ENST00000372066 TRIP12Q14669 1992 aaPredicted RBP14.95□□□□□ -0.02
LDB3-204ENST00000372066 PTPRJQ12913 1337 aa14.95□□□□□ -0.02
LDB3-204ENST00000372066 TCF20Q9UGU0 1960 aaKnown RBP14.95□□□□□ -0.02
LDB3-204ENST00000372066 ZSCAN5CA6NGD5 496 aaPredicted RBP14.94□□□□□ -0.02
LDB3-204ENST00000372066 MAGEB2O15479 319 aa14.94□□□□□ -0.02
LDB3-204ENST00000372066 IL18RAPO95256 599 aa14.94□□□□□ -0.02
LDB3-204ENST00000372066 ASS1P00966 412 aaKnown RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms