RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 HMGB1P1B2RPK0 211 aaPredicted RBP7.48□□□□□ -1.21
USP1-202ENST00000371146 CD4P01730 458 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 CCDC130P13994 396 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 KLK7P49862 253 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 RAB27AP51159 221 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 NOP14P78316 857 aaKnown RBP7.48□□□□□ -1.21
USP1-202ENST00000371146 TAP1Q03518 808 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 MTMR3Q13615 1198 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 KCNB1Q14721 858 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 LPAL2Q16609 132 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 ANO4Q32M45 955 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 DCAF4L1Q3SXM0 396 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 DCUN1D2Q6PH85 259 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 FAM114A1Q8IWE2 563 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 MORC4Q8TE76 937 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 RNF139Q8WU17 664 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 TMEM209Q96SK2 561 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 CUEDC2Q9H467 287 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 ERVK-5Q9HDB9 667 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 SF3B1O75533 1304 aaKnown RBP eCLIP7.48□□□□□ -1.21
USP1-202ENST00000371146 SPTAN1Q13813 2472 aaKnown RBP7.48□□□□□ -1.21
USP1-202ENST00000371146 ZNFX1Q9P2E3 1918 aaKnown RBP7.48□□□□□ -1.21
USP1-202ENST00000371146 A0A1B0GUA9 196 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 A0A1W2PRU2 124 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 C9IYK1 514 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 F8VP50 259 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 M0QYV0 167 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 AP1G2O75843 785 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 MAPTP10636 758 aaKnown RBP7.48□□□□□ -1.21
USP1-202ENST00000371146 GABRR2P28476 465 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 RPS6KA3P51812 740 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 ADKP55263 362 aaKnown RBP7.48□□□□□ -1.21
USP1-202ENST00000371146 MCCD1P59942 119 aaPredicted RBP7.48□□□□□ -1.21
USP1-202ENST00000371146 ATP11AP98196 1134 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 GRIK3Q13003 919 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 TARBP2Q15633 366 aaKnown RBP7.48□□□□□ -1.21
USP1-202ENST00000371146 TMCO4Q5TGY1 634 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 SCARA3Q6AZY7 606 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 TTC19Q6DKK2 380 aaPredicted RBP7.48□□□□□ -1.21
USP1-202ENST00000371146 KREMEN2Q8NCW0 462 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 TSC1Q92574 1164 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 GDF15Q99988 308 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 SMYD3Q9H7B4 428 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 SPTLC3Q9NUV7 552 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 KBTBD4Q9NVX7 518 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 TRMT1Q9NXH9 659 aaKnown RBP7.48□□□□□ -1.21
USP1-202ENST00000371146 FRMPD4Q14CM0 1322 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 SPTBN4Q9H254 2564 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 MDM4O15151 490 aa7.47□□□□□ -1.21
USP1-202ENST00000371146 CNPP09543 421 aaKnown RBP7.47□□□□□ -1.21
USP1-202ENST00000371146 LMO2P25791 158 aa7.47□□□□□ -1.21
USP1-202ENST00000371146 NLRP12P59046 1061 aa7.47□□□□□ -1.21
USP1-202ENST00000371146 MAPK7Q13164 816 aa7.47□□□□□ -1.21
USP1-202ENST00000371146 TMEM119Q4V9L6 283 aa7.47□□□□□ -1.21
USP1-202ENST00000371146 RTP2Q5QGT7 225 aa7.47□□□□□ -1.21
USP1-202ENST00000371146 PDZD4Q76G19 769 aaPredicted RBP7.47□□□□□ -1.21
USP1-202ENST00000371146 RYBPQ8N488 228 aaPredicted RBP7.47□□□□□ -1.21
USP1-202ENST00000371146 SLC30A5Q8TAD4 765 aa7.47□□□□□ -1.21
USP1-202ENST00000371146 C17orf50Q8WW18 174 aa7.47□□□□□ -1.21
USP1-202ENST00000371146 CTNNBL1Q8WYA6 563 aaPredicted RBP7.47□□□□□ -1.21
USP1-202ENST00000371146 APBB2Q92870 758 aa7.47□□□□□ -1.21
USP1-202ENST00000371146 PSMB7Q99436 277 aa7.47□□□□□ -1.21
USP1-202ENST00000371146 NGRNQ9NPE2 291 aaKnown RBP7.47□□□□□ -1.21
USP1-202ENST00000371146 HCFC1R1Q9NWW0 138 aa7.47□□□□□ -1.21
USP1-202ENST00000371146 TNFSF13BQ9Y275 285 aa7.47□□□□□ -1.21
USP1-202ENST00000371146 TRIOO75962 3097 aa7.47□□□□□ -1.21
USP1-202ENST00000371146 CHD7Q9P2D1 2997 aa7.47□□□□□ -1.21
USP1-202ENST00000371146 TRIM66O15016 1216 aa7.47□□□□□ -1.21
USP1-202ENST00000371146 TEX28O15482 410 aa7.47□□□□□ -1.21
USP1-202ENST00000371146 CYP26A1O43174 497 aa7.47□□□□□ -1.21
USP1-202ENST00000371146 EXTL3O43909 919 aa7.47□□□□□ -1.21
USP1-202ENST00000371146 EFCAB14O75071 495 aa7.47□□□□□ -1.21
USP1-202ENST00000371146 GPR15P49685 360 aa7.47□□□□□ -1.21
USP1-202ENST00000371146 GRM2Q14416 872 aa7.47□□□□□ -1.21
USP1-202ENST00000371146 UBXN2BQ14CS0 331 aa7.47□□□□□ -1.21
USP1-202ENST00000371146 ACCSLQ4AC99 568 aa7.47□□□□□ -1.21
USP1-202ENST00000371146 VARS2Q5ST30 1063 aaKnown RBP7.47□□□□□ -1.21
USP1-202ENST00000371146 NAIF1Q69YI7 327 aaPredicted RBP7.47□□□□□ -1.21
USP1-202ENST00000371146 GBP6Q6ZN66 633 aa7.47□□□□□ -1.21
USP1-202ENST00000371146 ADGRD2Q7Z7M1 963 aa7.47□□□□□ -1.21
USP1-202ENST00000371146 PACS2Q86VP3 889 aa7.47□□□□□ -1.21
USP1-202ENST00000371146 CCDC33Q8N5R6 958 aa7.47□□□□□ -1.21
USP1-202ENST00000371146 MLKLQ8NB16 471 aa7.47□□□□□ -1.21
USP1-202ENST00000371146 SMG8Q8ND04 991 aaKnown RBP7.47□□□□□ -1.21
USP1-202ENST00000371146 GOLGA5Q8TBA6 731 aa7.47□□□□□ -1.21
USP1-202ENST00000371146 CRYGNQ8WXF5 182 aa7.47□□□□□ -1.21
USP1-202ENST00000371146 EMID1Q96A84 441 aaPredicted RBP7.47□□□□□ -1.21
USP1-202ENST00000371146 ZNF560Q96MR9 790 aa7.47□□□□□ -1.21
USP1-202ENST00000371146 CYP2S1Q96SQ9 504 aa7.47□□□□□ -1.21
USP1-202ENST00000371146 ADAM7Q9H2U9 754 aa7.47□□□□□ -1.21
USP1-202ENST00000371146 CBX8Q9HC52 389 aa7.47□□□□□ -1.21
USP1-202ENST00000371146 MAN1C1Q9NR34 630 aa7.47□□□□□ -1.21
USP1-202ENST00000371146 SEL1LQ9UBV2 794 aa7.47□□□□□ -1.21
USP1-202ENST00000371146 HCFC2Q9Y5Z7 792 aa7.47□□□□□ -1.21
USP1-202ENST00000371146 MYH9P35579 1960 aaKnown RBP7.47□□□□□ -1.21
USP1-202ENST00000371146 PVALEFA0A1B0GWK0 134 aa7.47□□□□□ -1.21
USP1-202ENST00000371146 ADAM12O43184 909 aa7.47□□□□□ -1.21
USP1-202ENST00000371146 TSPAN3O60637 253 aa7.47□□□□□ -1.21
USP1-202ENST00000371146 SLC4A1P02730 911 aa7.47□□□□□ -1.21
USP1-202ENST00000371146 AFPP02771 609 aaKnown RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms