RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 EFHBQ8N7U6 833 aa16.6■□□□□ 0.25
PRPF38B-202ENST00000370022 OR10T2Q8NGX3 314 aa16.6■□□□□ 0.25
PRPF38B-202ENST00000370022 HDAC7Q8WUI4 952 aa16.6■□□□□ 0.25
PRPF38B-202ENST00000370022 TNIP3Q96KP6 325 aa16.6■□□□□ 0.25
PRPF38B-202ENST00000370022 ERGIC2Q96RQ1 377 aa16.6■□□□□ 0.25
PRPF38B-202ENST00000370022 SDCBP2Q9H190 292 aa16.6■□□□□ 0.25
PRPF38B-202ENST00000370022 DAAM1Q9Y4D1 1078 aa16.6■□□□□ 0.25
PRPF38B-202ENST00000370022 CILPO75339 1184 aa16.59■□□□□ 0.25
PRPF38B-202ENST00000370022 ABLIM3O94929 683 aa16.59■□□□□ 0.25
PRPF38B-202ENST00000370022 RAP1GAPP47736 663 aa16.59■□□□□ 0.25
PRPF38B-202ENST00000370022 MFAP3P55082 362 aa16.59■□□□□ 0.25
PRPF38B-202ENST00000370022 KCNMA1Q12791 1236 aa16.59■□□□□ 0.25
PRPF38B-202ENST00000370022 INTS6LQ5JSJ4 861 aaKnown RBP16.59■□□□□ 0.25
PRPF38B-202ENST00000370022 LILRA6Q6PI73 481 aa16.59■□□□□ 0.25
PRPF38B-202ENST00000370022 TMEM184AQ6ZMB5 413 aa16.59■□□□□ 0.25
PRPF38B-202ENST00000370022 GLYCTKQ8IVS8 523 aa16.59■□□□□ 0.25
PRPF38B-202ENST00000370022 MICALL1Q8N3F8 863 aa16.59■□□□□ 0.25
PRPF38B-202ENST00000370022 C2orf15Q8WU43 125 aaKnown RBP16.59■□□□□ 0.25
PRPF38B-202ENST00000370022 SLC22A17Q8WUG5 538 aa16.59■□□□□ 0.25
PRPF38B-202ENST00000370022 PLCB1Q9NQ66 1216 aa16.59■□□□□ 0.25
PRPF38B-202ENST00000370022 CISHQ9NSE2 258 aa16.59■□□□□ 0.25
PRPF38B-202ENST00000370022 AFF4Q9UHB7 1163 aaKnown RBP16.59■□□□□ 0.25
PRPF38B-202ENST00000370022 HCFC2Q9Y5Z7 792 aa16.59■□□□□ 0.25
PRPF38B-202ENST00000370022 ATG2AQ2TAZ0 1938 aa16.58■□□□□ 0.25
PRPF38B-202ENST00000370022 WDR27A2RRH5 827 aa16.58■□□□□ 0.24
PRPF38B-202ENST00000370022 ADAM12O43184 909 aa16.58■□□□□ 0.24
PRPF38B-202ENST00000370022 TGM5O43548 720 aa16.58■□□□□ 0.24
PRPF38B-202ENST00000370022 TPM3P06753 285 aa16.58■□□□□ 0.24
PRPF38B-202ENST00000370022 ATF2P15336 505 aa16.58■□□□□ 0.24
PRPF38B-202ENST00000370022 LMO2P25791 158 aa16.58■□□□□ 0.24
PRPF38B-202ENST00000370022 KCNC3Q14003 757 aa16.58■□□□□ 0.24
PRPF38B-202ENST00000370022 COL19A1Q14993 1142 aa16.58■□□□□ 0.24
PRPF38B-202ENST00000370022 NFE2Q16621 373 aaPredicted RBP16.58■□□□□ 0.24
PRPF38B-202ENST00000370022 RTL10Q7L3V2 364 aa16.58■□□□□ 0.24
PRPF38B-202ENST00000370022 PALB2Q86YC2 1186 aa16.58■□□□□ 0.24
PRPF38B-202ENST00000370022 CASP10Q92851 521 aa16.58■□□□□ 0.24
PRPF38B-202ENST00000370022 ARID3AQ99856 593 aa16.58■□□□□ 0.24
PRPF38B-202ENST00000370022 SYT15Q9BQS2 421 aa16.58■□□□□ 0.24
PRPF38B-202ENST00000370022 NT5C1AQ9BXI3 368 aa16.58■□□□□ 0.24
PRPF38B-202ENST00000370022 PLEKHA4Q9H4M7 779 aa16.58■□□□□ 0.24
PRPF38B-202ENST00000370022 UBE2TQ9NPD8 197 aaPredicted RBP16.58■□□□□ 0.24
PRPF38B-202ENST00000370022 HSFX1Q9UBD0 423 aa16.58■□□□□ 0.24
PRPF38B-202ENST00000370022 A0A1W2PQC6 194 aa16.57■□□□□ 0.24
PRPF38B-202ENST00000370022 PDGFRBP09619 1106 aa16.57■□□□□ 0.24
PRPF38B-202ENST00000370022 CD58P19256 250 aa16.57■□□□□ 0.24
PRPF38B-202ENST00000370022 ACAT1P24752 427 aaKnown RBP16.57■□□□□ 0.24
PRPF38B-202ENST00000370022 NDST1P52848 882 aa16.57■□□□□ 0.24
PRPF38B-202ENST00000370022 ARPP19P56211 112 aa16.57■□□□□ 0.24
PRPF38B-202ENST00000370022 UBASH3AP57075 661 aa16.57■□□□□ 0.24
PRPF38B-202ENST00000370022 NR1I3Q14994 352 aa16.57■□□□□ 0.24
PRPF38B-202ENST00000370022 FAM171BQ6P995 826 aa16.57■□□□□ 0.24
PRPF38B-202ENST00000370022 RRAGAQ7L523 313 aa16.57■□□□□ 0.24
PRPF38B-202ENST00000370022 ARHGEF19Q8IW93 802 aa16.57■□□□□ 0.24
PRPF38B-202ENST00000370022 CRYBG2Q8N1P7 616 aa16.57■□□□□ 0.24
PRPF38B-202ENST00000370022 PABPC5Q96DU9 382 aaKnown RBP16.57■□□□□ 0.24
PRPF38B-202ENST00000370022 PKMYT1Q99640 499 aa16.57■□□□□ 0.24
PRPF38B-202ENST00000370022 IGFLR1Q9H665 355 aa16.57■□□□□ 0.24
PRPF38B-202ENST00000370022 SIX2Q9NPC8 291 aa16.57■□□□□ 0.24
PRPF38B-202ENST00000370022 DZANK1Q9NVP4 752 aa16.57■□□□□ 0.24
PRPF38B-202ENST00000370022 FBXW11Q9UKB1 542 aa16.57■□□□□ 0.24
PRPF38B-202ENST00000370022 SIK3Q9Y2K2 1263 aa16.57■□□□□ 0.24
PRPF38B-202ENST00000370022 MYO9BQ13459 2157 aa16.57■□□□□ 0.24
PRPF38B-202ENST00000370022 ADAM15Q13444 863 aa16.56■□□□□ 0.24
PRPF38B-202ENST00000370022 SYCP1Q15431 976 aa16.56■□□□□ 0.24
PRPF38B-202ENST00000370022 CTC1Q2NKJ3 1217 aa16.56■□□□□ 0.24
PRPF38B-202ENST00000370022 UVSSAQ2YD98 709 aa16.56■□□□□ 0.24
PRPF38B-202ENST00000370022 SLC39A12Q504Y0 691 aa16.56■□□□□ 0.24
PRPF38B-202ENST00000370022 KLHDC7AQ5VTJ3 777 aa16.56■□□□□ 0.24
PRPF38B-202ENST00000370022 C4orf50Q6ZRC1 276 aa16.56■□□□□ 0.24
PRPF38B-202ENST00000370022 UBR7Q8N806 425 aa16.56■□□□□ 0.24
PRPF38B-202ENST00000370022 B3GALNT2Q8NCR0 500 aa16.56■□□□□ 0.24
PRPF38B-202ENST00000370022 MYCBPAPQ8TBZ2 947 aa16.56■□□□□ 0.24
PRPF38B-202ENST00000370022 SPPL2BQ8TCT7 592 aa16.56■□□□□ 0.24
PRPF38B-202ENST00000370022 PCMTD1Q96MG8 357 aaPredicted RBP16.56■□□□□ 0.24
PRPF38B-202ENST00000370022 NAP1L5Q96NT1 182 aaPredicted RBP16.56■□□□□ 0.24
PRPF38B-202ENST00000370022 TMEM209Q96SK2 561 aa16.56■□□□□ 0.24
PRPF38B-202ENST00000370022 LSM14BQ9BX40 385 aaKnown RBP16.56■□□□□ 0.24
PRPF38B-202ENST00000370022 RBSNQ9H1K0 784 aa16.56■□□□□ 0.24
PRPF38B-202ENST00000370022 NME7Q9Y5B8 376 aa16.56■□□□□ 0.24
PRPF38B-202ENST00000370022 TRANK1O15050 2925 aa16.56■□□□□ 0.24
PRPF38B-202ENST00000370022 CBFA2T2O43439 604 aa16.55■□□□□ 0.24
PRPF38B-202ENST00000370022 OR4Q2P0C623 313 aa16.55■□□□□ 0.24
PRPF38B-202ENST00000370022 UCHL3P15374 230 aa16.55■□□□□ 0.24
PRPF38B-202ENST00000370022 PTPN1P18031 435 aaKnown RBP16.55■□□□□ 0.24
PRPF38B-202ENST00000370022 ELF1P32519 619 aa16.55■□□□□ 0.24
PRPF38B-202ENST00000370022 GTF2F1P35269 517 aaKnown RBP eCLIP16.55■□□□□ 0.243e-13■■■■■ 48.5
PRPF38B-202ENST00000370022 ADCY1Q08828 1119 aa16.55■□□□□ 0.24
PRPF38B-202ENST00000370022 LIN9Q5TKA1 542 aa16.55■□□□□ 0.24
PRPF38B-202ENST00000370022 DPY19L2P1Q6NXN4 242 aa16.55■□□□□ 0.24
PRPF38B-202ENST00000370022 RNF19BQ6ZMZ0 732 aa16.55■□□□□ 0.24
PRPF38B-202ENST00000370022 CCDC149Q6ZUS6 474 aa16.55■□□□□ 0.24
PRPF38B-202ENST00000370022 LRRTM3Q86VH5 581 aa16.55■□□□□ 0.24
PRPF38B-202ENST00000370022 GAS2L3Q86XJ1 694 aa16.55■□□□□ 0.24
PRPF38B-202ENST00000370022 TCEAL8Q8IYN2 117 aa16.55■□□□□ 0.24
PRPF38B-202ENST00000370022 KREMEN2Q8NCW0 462 aa16.55■□□□□ 0.24
PRPF38B-202ENST00000370022 TMEM176AQ96HP8 235 aa16.55■□□□□ 0.24
PRPF38B-202ENST00000370022 FUBP3Q96I24 572 aaKnown RBP eCLIP16.55■□□□□ 0.24
PRPF38B-202ENST00000370022 KREMEN1Q96MU8 473 aa16.55■□□□□ 0.24
PRPF38B-202ENST00000370022 ABCB6Q9NP58 842 aa16.55■□□□□ 0.24
PRPF38B-202ENST00000370022 DNAJC12Q9UKB3 198 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms